JSGe-AI/HiESD

README

All original slides were scanned at 40× magnification. The contents of each file/folder are as follows:

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ESD104-Summary-new.csv : A standard CSV file provides detailed mappings between tissue strip numbers, slide numbers, SVS files, annotation files, and connected component files.

Quality_Assessment_Mask_Description.txt : Class annotations for quality assessment masks.

ESD_40X_Quality_Assessment_Mask : Quality assessment masks for all slides.

ESD_40X_Thumbnail_downsample64 : Thumbnails of all original slides (downsampled 64x).

ESD_40X_annotation_downsample64 : Annotations of all slides (downsampled 64x).

ESD_40X_annotation_downsample64_xml : Annotations for all slides in xml format (downsampled 64x).

ESD_40X_thumbnail_annotation_combination : A combination of thumbnails and annotations for all slides.

Components_single_308 : For each tissue strip, we generated a connected component to pinpoint its location within the original WSI.