492

Christina Theodoris

ctheodoris

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Recent Activity

new activity 2 days ago

ctheodoris/Geneformer:Issue in Embedding Extraction

updated a model 2 days ago

ctheodoris/Geneformer

new activity 9 days ago

ctheodoris/Geneformer:Classifier stuck on validate

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ctheodoris's activity

New activity in ctheodoris/Geneformer 2 days ago

Issue in Embedding Extraction

#501 opened 3 days ago by

shakeel604

New activity in ctheodoris/Geneformer 9 days ago

Classifier stuck on validate

#500 opened 9 days ago by

sanderssm

New activity in ctheodoris/Geneformer 10 days ago

get_state_embs <cls> token missing in token dictionary

#499 opened 10 days ago by

Yuxi113

New activity in ctheodoris/Geneformer 11 days ago

how to load fine_tuned_models/gf-12L-95M-i4096_MTLCellClassifier_CELLxGENE_240522

#498 opened 11 days ago by

vtrifonov

In silico reprogramming - Enquiry on availability of this code

#497 opened 12 days ago by

vivekksingh

Model fine-tuning results problem

#496 opened 12 days ago by

HJY12138

New activity in ctheodoris/Geneformer 14 days ago

Cardiomyocyte Dataset Pre-Processing

#495 opened 14 days ago by

ro2h5

Choosing of Geneformer-predicted targets for wet lab experiments

#494 opened 14 days ago by

ro2h5

New activity in ctheodoris/Geneformer 17 days ago

About low precision model and data possibility

#493 opened 17 days ago by

Looong

New activity in ctheodoris/Geneformer 18 days ago

MTL classifier Perturbation emb mode

#492 opened 22 days ago by

saranyabalachandran

New activity in ctheodoris/Geneformer 24 days ago

Label mapping for using fine tuned model with in silico perturber?

#491 opened 25 days ago by

ag2022

Had a question about the classifier and the metadata you mentioned attr_to_balance set to ["disease","lvef","age","sex","length"]

#490 opened 26 days ago by

fhfhede

New activity in ctheodoris/Geneformer 28 days ago

Splitting dataset

#487 opened about 1 month ago by

ZYSK-huggingface

30m Model Only Output 18360 Gene Embeddings Instead of 25424

#489 opened 28 days ago by

parkjosh523

New activity in ctheodoris/Geneformer 29 days ago

Inquiry About PEFT Compatibility Issue

#466 opened 2 months ago by

zzzk123

New activity in ctheodoris/Geneformer 30 days ago

Getting an error while using extract_embs to extract geneformer embeddings

#488 opened about 1 month ago by

GalenP

New activity in ctheodoris/Geneformer about 1 month ago

Replicating results for Figure 6

#246 opened over 1 year ago by

MinieRosie

median computation : gene_median_dictionary_gc95M

#486 opened about 1 month ago by

shakeel604

Different N_Detections for OE or deletion of same gene with same dataset

#485 opened about 1 month ago by

ag2022

Getting an runtime error when trying to predict of mismached shapes

#484 opened about 1 month ago by

GalenP