Fixed bugs related to overexpressing genes
#229
by
davidjwen
- opened
- indexing was off by one with overexpressing "all"
- perturbed genes should be removed correctly before calculating the cosine similarities
- code cleaned code cleaned up slightly
known bug: the embeddings are very slightly different (< 1% cosine shift) if a cell is calculated on its own vs. in a batch
ctheodoris
changed pull request status to
merged