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ctheodoris
/
Geneformer
like
142
Fill-Mask
Transformers
PyTorch
Safetensors
ctheodoris/Genecorpus-30M
bert
Inference Endpoints
License:
apache-2.0
Model card
Files
Files and versions
Community
321
Train
Deploy
Use in Transformers
main
Geneformer
12 contributors
History:
127 commits
Christina Theodoris
add option for hyperparameter tuning to cc.validate
4bddd45
4 days ago
docs
Update readthedocs for classifier
30 days ago
examples
add option for hyperparameter tuning to cc.validate
4 days ago
fine_tuned_models
Add fine-tuned CellClassifier for cardiomyopathy
8 months ago
geneformer-12L-30M
Upload 12 layer Geneformer model
9 months ago
geneformer
add option for hyperparameter tuning to cc.validate
4 days ago
.gitattributes
1.3 kB
Adding `safetensors` variant of this model (#209)
8 months ago
.gitignore
3.08 kB
Add gitignore file
10 months ago
.pre-commit-config.yaml
737 Bytes
Add pre-commit config
4 months ago
.readthedocs.yaml
396 Bytes
update readthedocs.yaml
2 months ago
MANIFEST.in
127 Bytes
Fixes to stats and adding gene dict attempt number 2 (#13)
10 months ago
README.md
6.87 kB
add readthedocs link to model card
2 months ago
config.json
565 Bytes
upload Geneformer 6L-30M config
about 2 years ago
model.safetensors
41.2 MB
LFS
Adding `safetensors` variant of this model (#209)
8 months ago
pytorch_model.bin
pickle
Detected Pickle imports (4)
"collections.OrderedDict"
,
"torch.FloatStorage"
,
"torch._utils._rebuild_tensor_v2"
,
"torch.LongStorage"
What is a pickle import?
41.2 MB
LFS
upload Geneformer 6L-30M
about 2 years ago
requirements.txt
295 Bytes
add option for hyperparameter tuning to cc.validate
4 days ago
setup.py
972 Bytes
update dependencies, reinstate compatibility with python<3.9 with typing for List
3 months ago
training_args.bin
pickle
Detected Pickle imports (4)
"transformers.trainer_utils.SchedulerType"
,
"transformers.training_args.TrainingArguments"
,
"torch.device"
,
"transformers.trainer_utils.IntervalStrategy"
How to fix it?
2.61 kB
LFS
upload training args for Geneformer 6L-30M
about 2 years ago