dnabert_genomic
This model is a fine-tuned version of zhihan1996/DNABERT-2-117M on Genomic_Benchmarks_human_enhancers_cohn. It achieves the following results on the evaluation set:
- Loss: 0.4892
- Accuracy: 0.7601
Model description
More information needed
Intended uses & limitations
More information needed
Training and evaluation data
More information needed
Training procedure
Training hyperparameters
The following hyperparameters were used during training:
- learning_rate: 1.8621576331491283e-05
- train_batch_size: 64
- eval_batch_size: 64
- seed: 42
- optimizer: Use adamw_torch with betas=(0.9,0.999) and epsilon=1e-08 and optimizer_args=No additional optimizer arguments
- lr_scheduler_type: linear
- num_epochs: 3
Training results
| Training Loss | Epoch | Step | Validation Loss | Accuracy |
|---|---|---|---|---|
| No log | 1.0 | 261 | 0.4974 | 0.7563 |
| 0.5156 | 2.0 | 522 | 0.4951 | 0.7515 |
| 0.5156 | 3.0 | 783 | 0.4892 | 0.7601 |
Framework versions
- Transformers 4.46.2
- Pytorch 2.2.1+cu121
- Datasets 3.1.0
- Tokenizers 0.20.3
- Downloads last month
- 4
This model does not have enough activity to be deployed to Inference API (serverless) yet. Increase its social
visibility and check back later, or deploy to Inference Endpoints (dedicated)
instead.
Model tree for vojtam/dnabert_genomic
Base model
zhihan1996/DNABERT-2-117M