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Runtime error
Runtime error
added model from pdb_string
#1
by
napoles3d
- opened
app.py
CHANGED
@@ -13,12 +13,17 @@ response = requests.post('https://api.esmatlas.com/foldSequence/v1/pdb/', header
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name = sequence[:3] + sequence[-3:]
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pdb_filename = "test.pdb"
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pdb_string = response.content.decode('utf-8')
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with open(pdb_filename, "w") as out:
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out.write(pdb_string)
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print(pdb_string)
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xyzview = py3Dmol.view(js='https://3dmol.org/build/3Dmol.js', width=800, height=400)
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xyzview.
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print("Set style")
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showmol(xyzview, height = 500,width=800)
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print("Displayed")
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name = sequence[:3] + sequence[-3:]
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pdb_filename = "test.pdb"
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pdb_string = response.content.decode('utf-8')
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#with open(pdb_filename, "w") as out:
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# out.write(pdb_string)
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# print(pdb_string)
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#xyzview = py3Dmol.view(js='https://3dmol.org/build/3Dmol.js', width=800, height=400)
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xyzview = py3Dmol.view()
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#xyzview.addModel(pdb_filename, "pdb")
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xyzview.addModel(pdb_string,'pdb')
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xyzview.setStyle({'cartoon':{
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"color": "spectrum",}})
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xyzview.zoomTo()
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print("Set style")
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showmol(xyzview, height = 500,width=800)
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print("Displayed")
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