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protein-lm-gb1

This model was trained from scratch on the gb1 dataset. It achieves the following results on the evaluation set:

  • Loss: 4.9175
  • Mse: 4.9175
  • Rmse: 2.2175
  • Mae: 1.9137
  • R2: -0.0720
  • Smape: 79.2041

Model description

More information needed

Intended uses & limitations

More information needed

Training and evaluation data

More information needed

Training procedure

Training hyperparameters

The following hyperparameters were used during training:

  • learning_rate: 2e-05
  • train_batch_size: 64
  • eval_batch_size: 20
  • seed: 42
  • optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08
  • lr_scheduler_type: linear
  • num_epochs: 3

Training results

Training Loss Epoch Step Validation Loss Mse Rmse Mae R2 Smape
5.202 1.0 7539 4.9090 4.9090 2.2156 1.9131 -0.0702 79.1446
5.247 2.0 15078 4.9849 4.9849 2.2327 1.9185 -0.0867 79.6722
5.2129 3.0 22617 4.9175 4.9175 2.2175 1.9137 -0.0720 79.2041

Framework versions

  • Transformers 4.25.1
  • Pytorch 1.13.0+cu116
  • Datasets 2.8.0
  • Tokenizers 0.13.2
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