biogpt
This model was trained from scratch on the ncbi_disease dataset. It achieves the following results on the evaluation set:
- Loss: 0.1599
- Precision: 0.5170
- Recall: 0.6014
- F1: 0.5560
- Accuracy: 0.9556
Model description
More information needed
Intended uses & limitations
More information needed
Training and evaluation data
More information needed
Training procedure
Training hyperparameters
The following hyperparameters were used during training:
- learning_rate: 0.0001
- train_batch_size: 16
- eval_batch_size: 16
- seed: 42
- optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08
- lr_scheduler_type: linear
- num_epochs: 3
Training results
Training Loss | Epoch | Step | Validation Loss | Precision | Recall | F1 | Accuracy |
---|---|---|---|---|---|---|---|
No log | 1.0 | 340 | 0.1765 | 0.3914 | 0.5946 | 0.4720 | 0.9425 |
0.2426 | 2.0 | 680 | 0.1538 | 0.4769 | 0.6091 | 0.5350 | 0.9514 |
0.0881 | 3.0 | 1020 | 0.1599 | 0.5170 | 0.6014 | 0.5560 | 0.9556 |
Framework versions
- Transformers 4.28.1
- Pytorch 2.0.0+cu118
- Datasets 2.11.0
- Tokenizers 0.13.3
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Dataset used to train j1username/biogpt
Evaluation results
- Precision on ncbi_diseaseself-reported0.517
- Recall on ncbi_diseaseself-reported0.601
- F1 on ncbi_diseaseself-reported0.556
- Accuracy on ncbi_diseaseself-reported0.956