#genome
stringclasses
121 values
asm_name
stringclasses
120 values
assembly_accession
stringclasses
120 values
bioproject
stringclasses
45 values
biosample
stringclasses
120 values
wgs_master
float64
seq_rel_date
stringclasses
98 values
submitter
stringclasses
76 values
ftp_path
stringclasses
120 values
img_id
float64
637M
2.51B
gtdb_id
stringclasses
120 values
scope
stringclasses
3 values
assembly_level
stringclasses
1 value
genome_rep
stringclasses
1 value
refseq_category
stringclasses
3 values
release_type
stringclasses
2 values
taxid
float64
1.15k
681k
species_taxid
float64
7
911k
organism_name
stringclasses
120 values
infraspecific_name
stringclasses
112 values
isolate
stringclasses
1 value
superkingdom
stringclasses
2 values
phylum
stringclasses
18 values
class
stringclasses
30 values
order
stringclasses
56 values
family
stringclasses
75 values
genus
stringclasses
89 values
species
stringclasses
117 values
classified
bool
1 class
unique_name
stringclasses
121 values
lv1_group
stringclasses
2 values
lv2_group
stringclasses
13 values
score_faa
float64
0.93
1
score_fna
float64
0.88
1
score_rrna
float64
0.1
1
score_trna
float64
0.6
1
total_length
float64
618k
9.12M
contigs
float64
1
22
gc
float64
22.5
72.2
n50
float64
616k
9.03M
l50
float64
1
1
proteins
float64
525
7.92k
protein_length
float64
172k
2.68M
coding_density
float64
74
96.9
completeness
float64
76.3
100
contamination
float64
0
4.4
strain_heterogeneity
float64
0
100
markers
float64
124
383
5s_rrna
stringclasses
2 values
16s_rrna
stringclasses
1 value
23s_rrna
stringclasses
1 value
trnas
float64
14
20
draft_quality
stringclasses
2 values
start_position
int64
0
10M
autotrain_text
stringlengths
150
150
autotrain_label
class label
2 classes
G000008565
ASM856v1
GCF_000008565.1
PRJNA57665
SAMN02603976
null
2000/12/11
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/565/GCF_000008565.1_ASM856v1
637,000,092
RS_GCF_000008565.1
Monoisolate
Complete Genome
Full
reference genome
Major
243,230
1,299
Deinococcus radiodurans R1
strain=R1
null
Bacteria
Deinococcus-Thermus
Deinococci
Deinococcales
Deinococcaceae
Deinococcus
Deinococcus radiodurans
true
Deinococcus radiodurans R1 ASM856v1
Eubacteria
Terrabacteria
1
0.991
0.8
1
3,284,156
4
66.61
2,648,638
1
3,248
987,980
88.625967
98.72
0
0
359
yes
yes
yes
20
high
2,749,630
GCCTTCCTGACGGGTCCCATCGGTCTGGCGATCGCGGCCATTGGCCTCCTGGTCGGTGCGGGCGTGGCGCTCTACCGCAACTGGGATGAGGTCGTCTCCTGGGCGCACAAGACGTGGAACCAGATCAAGGGCATCGTCGAGAACGCTATC
0no label
G000007625
ASM762v1
GCF_000007625.1
PRJNA224116
SAMN02603289
null
2003/02/05
Gottingen Genomics Laboratory
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/625/GCF_000007625.1_ASM762v1
637,000,080
RS_GCF_000007625.1
Monoisolate
Complete Genome
Full
representative genome
Major
212,717
1,513
Clostridium tetani E88
strain=Massachusetts substr. E88
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Clostridiaceae
Clostridium
Clostridium tetani
true
Clostridium tetani E88 Massachusetts substr. E88
Eubacteria
Firmicutes
1
0.997
1
1
2,873,333
2
28.64
2,799,251
1
2,799
856,294
87.797934
98.28
0.14
0
315
yes
yes
yes
20
high
686,400
TACCAGCATCCTTCATATCTTTTTCATTTACTACTTTTAAAAATTTAGGAGATAAAAATATTCCAATAATTAAGGCATAAAGCATTGGTAGTAGTACTATAGTTCCAGGTCCAAATTTAAATTTTATAACACCAATTGCTTCTGCTATTA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,267,100
ATTGGATCCTCCAGGCCCTATCAAGCCTTCAGTTGACTGCAACCTGAGAAGGGACCTCAAGCCACTCCTAAATTCCTGACCCACAAAAGGTGTGTGGGATAACAAATGCTGAATGTTGTTTTAAGCAGCAGTTTGGAGGTATTTTGTTAC
11
G000007705
ASM770v1
GCF_000007705.1
PRJNA224116
SAMN02603528
null
2003/08/22
LNCC, Brazil
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/705/GCF_000007705.1_ASM770v1
637,000,074
RS_GCF_000007705.1
Monoisolate
Complete Genome
Full
representative genome
Major
243,365
536
Chromobacterium violaceum ATCC 12472
strain=ATCC 12472
null
Bacteria
Proteobacteria
Betaproteobacteria
Neisseriales
Chromobacteriaceae
Chromobacterium
Chromobacterium violaceum
true
Chromobacterium violaceum ATCC 12472
Eubacteria
Proteobacteria
1
1
0.9
1
4,751,080
1
64.83
4,751,080
1
4,298
1,428,392
88.582238
99.04
0.45
0
372
yes
yes
yes
20
high
48,360
GCGCGCGACGCCACCCTGGCCATGCCGCAGCTGCTGCTGCCCGCGGTGCAGGTCAATATCCGCGCGGGCCGCCTGCCGCCGGCCGAGGACAACGGCGTCCGCTACCTGAAGCTGCCGCTGGACGCGCTCTGAGCGCGGCGCGCCGTTTCG
0no label
G000010525
ASM1052v1
GCF_000010525.1
PRJNA224116
SAMD00060925
null
2007/10/16
University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/525/GCF_000010525.1_ASM1052v1
641,228,476
RS_GCF_000010525.1
Monoisolate
Complete Genome
Full
representative genome
Major
438,753
7
Azorhizobium caulinodans ORS 571
strain=ORS 571
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Xanthobacteraceae
Azorhizobium
Azorhizobium caulinodans
true
Azorhizobium caulinodans ORS 571
Eubacteria
Proteobacteria
1
1
0.9
1
5,369,772
1
67.32
5,369,772
1
4,810
1,620,542
88.922714
100
0
0
358
yes
yes
yes
20
high
5,141,630
CGCCGCGCGCTGGCCACCGCATGGGCGGACATGTTGGCCGCCATGGGCGGCGGCACATCGGCACCCGCATCGGGCAGCTCGCCGTCTTCCGCCGGCAGGGGCGGGCGGGGACGGGGCGCCGGCGGCTGGTCGGCGGCGGCGGCCACCACC
0no label
G000010565
ASM1056v1
GCA_000010565.1
PRJDA19023
SAMD00060921
null
2007/05/07
Marine Biotechnology Institute Co., Ltd
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/565/GCA_000010565.1_ASM1056v1
640,427,128
GB_GCA_000010565.1
Monoisolate
Complete Genome
Full
na
Major
370,438
110,500
Pelotomaculum thermopropionicum SI
strain=SI
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Peptococcaceae
Pelotomaculum
Pelotomaculum thermopropionicum
true
Pelotomaculum thermopropionicum SI
Eubacteria
Firmicutes
0.98
1
1
1
3,025,375
1
52.96
3,025,375
1
3,001
887,464
86.415667
100
0.63
0
331
yes
yes
yes
20
high
2,306,070
GGTATCAAAAAGGGCCTGGACGGTTTTTATGGATTTCCGGTAGGTGTCCGAATTTACTACGGCGTCGGCCAGAGCCTTCCTTTTTGTATCCGCTTGAGCTTGTATGCTTGCAGCTACTTTCCGTAATGTATCCGCTTGAATTACAACCAC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,591,900
CCTGCAGCTGCTTCACTCCCGTCCCTGCTCCATCTTCACGCGGCCTCCCCCAACCTGTGCGTCTCTGTTTTCACGTGGCCTTCTTGCAGAGACGTCAATCACATTGGATTGGGGCCCATCCTACTCCGTTATGACTTCATCTTAACTAGA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,492,600
CTCTGGGTGAGGCACAGCGTCCTGGGTGCCCAGATAGGGGTGCAGAATCCTGGGTGCCTGGTTAGGGGTACAGAGTCCTGAGTGCCTGGGTAGGATACAGAATCCTGGGTGTCTGGTTTGGTTGCAGTGTCCTGGGTGCTTTGGGTGGGG
11
G000010605
ASM1060v1
GCF_000010605.1
PRJNA224116
SAMD00060929
null
2008/04/08
The University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/605/GCF_000010605.1_ASM1060v1
641,522,653
RS_GCF_000010605.1
Monoisolate
Complete Genome
Full
representative genome
Major
455,632
1,911
Streptomyces griseus subsp. griseus NBRC 13350
strain=NBRC 13350
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces griseus
true
Streptomyces griseus subsp. griseus NBRC 13350
Eubacteria
Actinobacteria
1
1
1
1
8,545,929
1
72.23
8,545,929
1
7,113
2,547,362
87.837226
99.84
0
0
357
yes
yes
yes
20
high
8,441,160
GCCAGGCCCTCGGCCAAGCCGCAGTTGCAGGTGCTGCTCAGCTCGCGCCGCTCCCGCGGGAAGGGCGCGACCCCTTTGTTGCCTGCACATCGAGGACGATCCCGGAGAGGGATTTCTTTGTGATCGCCTGGCTGCCGTCCAGAACGGCGC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,986,950
GGGCACAGATGGGTGGGAACGGACAGGCGGGCGTGAGTCAGCGTCCAGCCTGGCCAGGTCCAGAGCATGCCGGGCTGCAGGCTGACCATGTGCTCACCCTCTCTCGAGGGCTTCTTCAAAGGGAGCACTCCCACATCCCCAAACCTCAGA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,719,900
CGCAGCTAGTGCCCTGTTAGCAGGTGCAGTGCCCGTGCCATCTTCTCCCCAGACCCAGACCCTCCCCAACTCATGGAGACCCTGTCCTCCGGGCCATCCCCCGTCCATGAATGCCCGGGGCTTGGGGTCCATCTCCTGTCCACATGGACC
11
G000010605
ASM1060v1
GCF_000010605.1
PRJNA224116
SAMD00060929
null
2008/04/08
The University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/605/GCF_000010605.1_ASM1060v1
641,522,653
RS_GCF_000010605.1
Monoisolate
Complete Genome
Full
representative genome
Major
455,632
1,911
Streptomyces griseus subsp. griseus NBRC 13350
strain=NBRC 13350
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces griseus
true
Streptomyces griseus subsp. griseus NBRC 13350
Eubacteria
Actinobacteria
1
1
1
1
8,545,929
1
72.23
8,545,929
1
7,113
2,547,362
87.837226
99.84
0
0
357
yes
yes
yes
20
high
6,925,750
ATGGACGAGACCGGCGGCACCTTCACCGTCAGCAGTCGCCGCCTCATGGTGCTCGGCACCGCCTGAGCAGCCCGGCCCGGCCGCACCCGTACCCCATCGCGACCACCATCTGTGAAAGAGAGGGTCCCCGTGGAAACCGACGCAGTCCGC
0no label
G000010085
ASM1008v1
GCF_000010085.1
PRJNA224116
SAMD00061079
null
2006/01/10
Kitasato Institute for Life Sciences, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/085/GCF_000010085.1_ASM1008v1
637,000,270
RS_GCF_000010085.1
Monoisolate
Complete Genome
Full
representative genome
Major
343,509
63,612
Sodalis glossinidius str. 'morsitans'
strain=morsitans
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Pectobacteriaceae
Sodalis
Sodalis glossinidius
true
Sodalis glossinidius str. 'morsitans' morsitans
Eubacteria
Proteobacteria
1
0.993
1
1
4,292,502
4
54.5
4,171,146
1
5,742
1,142,020
78.310831
100
0
0
357
yes
yes
yes
20
high
3,018,340
GGTCGATCACCTCTCCCGCCAGTTGCCCACAGGCGGCATCGATATCGTCGCCGCGCGTTTTACGTACGATGGTCGTGAACTCGTAGCCCATCAGCACCTTGGCGAAGCGATCCACCCGGCTATTGGAACTGCGGCCGTAGGGGGCGCCGG
0no label
G000010665
ASM1066v1
GCF_000010665.1
PRJNA224116
SAMD00060954
null
2009/06/11
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/665/GCF_000010665.1_ASM1066v1
644,736,352
RS_GCF_000010665.1
Monoisolate
Complete Genome
Full
representative genome
Major
573,370
184,917
Desulfovibrio magneticus RS-1
strain=RS-1
null
Bacteria
Proteobacteria
Deltaproteobacteria
Desulfovibrionales
Desulfovibrionaceae
Desulfovibrio
Desulfovibrio magneticus
true
Desulfovibrio magneticus RS-1
Eubacteria
Proteobacteria
0.99
0.996
1
1
5,315,620
3
62.67
5,248,049
1
4,555
1,546,858
85.744052
100
0
0
357
yes
yes
yes
20
high
120,900
TGCTGGCATGGCATTCAAGAGGTCGTGGGTTCGATTCCCTCCAGCTCCACCACGAAGCATGCCAAGGGGTTACCGAGAAATCGGTGACCCCTTTTTCTTTGGCCCCGTGCCAACTCACCGCCAACGCTCCCGTTGGCTCTGACAGCCCGG
0no label
G000009745
ASM974v1
GCF_000009745.1
PRJNA224116
SAMD00061075
null
2003/10/03
NHRI, Taiwan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/745/GCF_000009745.1_ASM974v1
637,000,337
RS_GCF_000009745.1
Multiisolate
Complete Genome
Full
representative genome
Major
196,600
672
Vibrio vulnificus YJ016
strain=YJ016
null
Bacteria
Proteobacteria
Gammaproteobacteria
Vibrionales
Vibrionaceae
Vibrio
Vibrio vulnificus
true
Vibrio vulnificus YJ016
Eubacteria
Proteobacteria
1
0.996
1
1
5,260,086
3
46.68
3,354,505
1
4,639
1,553,759
87.03525
100
0.14
0
369
yes
yes
yes
20
high
970,060
CTTTAGGAAACCTCTTGTTGGTTTTTCAACATTGATGCCTTATGAGCCATGCCTTAAGTGCGGATAAGCAGAAAAACCTTGCCACCTTCCGGCAGATGTCTCTAAAAGCGGCAAAGCGGCAAAGTGGCAATGCCAGTAGATAGAGAGCAA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,216,650
GGGCCGGCTCGGGGGGGAGCGGGGGGCCGCGCCAGGCCGCTGAAGTGTCCCCGTTTCGCGTGGGCAGAGCGCGCCTCCCCACGCATCCTGCTGAGGGCCAGCCTCTGCTAGGTGCGTGACACGGAGGGGACAGAACGGAAACCTTGTCCT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,754,400
GGCTATGGGAAAAAAATCTACCTGTGGCAAGTTGGGGGCCAGAAGGAAAGCTGCATTATCAGCTTTGCCTGAGAATATGTGATCCCTGCCTGGCCCTCATGGCTCTGGACTTAGGGTTTGAATTTGTACTTGCTGCAGAGATGAGCAAGT
11
G000010085
ASM1008v1
GCF_000010085.1
PRJNA224116
SAMD00061079
null
2006/01/10
Kitasato Institute for Life Sciences, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/085/GCF_000010085.1_ASM1008v1
637,000,270
RS_GCF_000010085.1
Monoisolate
Complete Genome
Full
representative genome
Major
343,509
63,612
Sodalis glossinidius str. 'morsitans'
strain=morsitans
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Pectobacteriaceae
Sodalis
Sodalis glossinidius
true
Sodalis glossinidius str. 'morsitans' morsitans
Eubacteria
Proteobacteria
1
0.993
1
1
4,292,502
4
54.5
4,171,146
1
5,742
1,142,020
78.310831
100
0
0
357
yes
yes
yes
20
high
1,566,890
TTAGCAATCTGGGCATTGCCAATCGTTTCCAGGTGGTGCAGGGCCGGACGCGTATAAATGTTAAGTTGACCGAAAAAGACGGCGACGTCACTGACTTTAATTTTTCGGGTTTTACGGTGACGCCGCAGGATTGGGACCGTTTCGTCAACG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,810,000
GGGTGAGGACACAGCCAAACCACATCAGGGACTAAAAATAAACCAATAAAAAGAGTTACTTCAAGTATGGTGGATATTAGAAAGGAATCAAACAAAGCCAGGAGGGGGTGTGACAAACATTCTTCTAGATGTACTGAGAACAGGAAGACC
11
G000010505
ASM1050v1
GCF_000010505.1
PRJNA224116
SAMD00060922
null
2008/05/20
Kitasato University
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/505/GCF_000010505.1_ASM1050v1
642,555,148
RS_GCF_000010505.1
Monoisolate
Complete Genome
Full
representative genome
Major
431,947
837
Porphyromonas gingivalis ATCC 33277
strain=ATCC 33277
null
Bacteria
Bacteroidetes
Bacteroidia
Bacteroidales
Porphyromonadaceae
Porphyromonas
Porphyromonas gingivalis
true
Porphyromonas gingivalis ATCC 33277
Eubacteria
Bacteroidetes
1
1
0.9
1
2,354,886
1
48.36
2,354,886
1
1,981
685,765
85.805173
99.92
0
0
278
yes
yes
yes
20
high
1,564,550
AATCGGTATAGCTGTCGGGATCGGAACTCATGGAAACGATACTGATGGTGCGGCCATGGAAGTTGCCGTCGCATACGATGATGACAGCCTTCTCTTCGGGTATTCCTTTCACACGATAACCCCAACGACGAGAGAGTTTCAAAGCTGTCT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,227,950
CAGGTGGGCTGGGCGGGGTGGCTCACGCTTGTAATCCAAGCACTTTGGGAGGTTGAGGCGGGCAGATCACAAGGTCAGGAATTCAAGACCAGCCTGATCAATATGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCCGGGCGTG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,295,300
ACTTAAACCCAAGAGGCGGAGGTTGCAGTGAGCCAAGATCACGCCATTGCACTCCAGACTGGGCAACAAGAGTGAAACTCTGTCTCAAAAAAAAGGAAAAGAAAAAAGAAAGGTTAGATTCTCATTACTTTCCACCCAGTCTTCACTCTC
11
G000007865
ASM786v1
GCF_000007865.1
PRJNA224116
SAMN02604086
null
2004/01/30
Univ. Minnesota
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/865/GCF_000007865.1_ASM786v1
637,000,168
RS_GCF_000007865.1
Monoisolate
Complete Genome
Full
representative genome
Major
262,316
1,764
Mycobacterium avium subsp. paratuberculosis K-10
strain=K-10
null
Bacteria
Actinobacteria
Actinobacteria
Corynebacteriales
Mycobacteriaceae
Mycobacterium
Mycobacterium avium
true
Mycobacterium avium subsp. paratuberculosis K-10
Eubacteria
Actinobacteria
1
1
1
1
4,829,781
1
69.3
4,829,781
1
4,544
1,497,326
91.345322
99.28
0.33
0
336
yes
yes
yes
20
high
3,608,800
CGTCCCCAACACCGGACCCGCACACCTGGCCGCCGCGGTAGGCACACCGGTGGTGTCGCTGTTCGCCCCGGTGGTGCCCGCCGGCCAGTGGCGCCCCTACGGGCGGCGGGTCCGCGTGCTCGGCGACCAGTTCGCGCCCTGCCGGGCCAG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,431,600
ACGTCTAAAACACAAGCTTAAGAAGCATTGCGTCAGAAAGAAAGGCAGGAAGCATAAACAGGAAGTTAGTGGAGTTGTCTAGAAACAGACAAAAAACTTAGGCAAAAAGCAGGAACGGCAGTGGGGACACATTCTAACCGCATGTTCAAT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,719,700
TAAGCATTCCCTTTTCTCTGTGTCCTCATCAATTTCAAAGTATTTTATAACCGAATCATAGGAGTGACTTCCCATCACCTTTCCTGCATTCTACTAGTTAAAAGCAAGTCACAGGTCCCTTCCACACTCCAGTGGAGGGGACCCCACAAA
11
G000007005
ASM700v1
GCF_000007005.1
PRJNA224116
SAMN02603227
null
2002/11/25
European/Canadian Consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/005/GCF_000007005.1_ASM700v1
638,154,518
RS_GCF_000007005.1
Monoisolate
Complete Genome
Full
representative genome
Major
273,057
2,287
Sulfolobus solfataricus P2
strain=P2
null
Archaea
Crenarchaeota
Thermoprotei
Sulfolobales
Sulfolobaceae
Sulfolobus
Sulfolobus solfataricus
true
Sulfolobus solfataricus P2
Archaea
Crenarchaeota
0.96
1
1
0.9
2,992,245
1
35.79
2,992,245
1
3,281
874,971
86.125133
100
0
0
196
no
yes
yes
14
medium
1,021,670
TGTCCGGAATTTCCTTAGGATCGGAAAGGGTTATTACACTATCGAACTTCTCTTTGACCTCCTTTAAGGCAATAACGTTTATATCAATACAATATAGTTTGGTAGCGAATTCCAACAAGTATTTACAGTAAAATCCATTTCCACACCCGT
0no label
G000009345
ASM934v1
GCF_000009345.1
PRJNA57741
SAMEA1705958
null
2007/01/12
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/345/GCF_000009345.1_ASM934v1
640,069,335
RS_GCF_000009345.1
Monoisolate
Complete Genome
Full
reference genome
Major
393,305
630
Yersinia enterocolitica subsp. enterocolitica 8081
strain=8081
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Yersiniaceae
Yersinia
Yersinia enterocolitica
true
Yersinia enterocolitica subsp. enterocolitica 8081
Eubacteria
Proteobacteria
1
0.998
0.9
1
4,683,620
2
47.22
4,615,899
1
4,253
1,352,606
85.086813
99.95
0
0
373
yes
yes
yes
20
high
4,656,080
GGGAAGTAGAGTAAGAGGCAGGGCGTAGTCGAACTATTTCCCTGCCTCTCCTCTCCGTTTAAACGCTGGCGAACGCCATTGCCACGTCAGTGTAGCGCGATGTATACGTATTTCTGGCTTCCGTCCTCAGATAGGGATTACCTTCGGGCA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,490,700
CCAGCAATCCCACTACCGGTATATACCAAAAAGAAAGGAAGGGCCAGGCACGGTAGCTCACGCCTATAATCCCAGCACTTTGGGAGGCCGAGGCAGGCAGATCACTTGGGGTCAGGAGTTCAAGACCAGCCTGGCCAACATAGTAAAACC
11
G000009125
ASM912v1
GCF_000009125.1
PRJNA224116
SAMEA3138192
null
2003/05/06
Genoscope
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/125/GCF_000009125.1_ASM912v1
637,000,231
RS_GCF_000009125.1
Multiisolate
Complete Genome
Full
representative genome
Major
267,608
305
Ralstonia solanacearum GMI1000
strain=GMI1000
null
Bacteria
Proteobacteria
Betaproteobacteria
Burkholderiales
Burkholderiaceae
Ralstonia
Ralstonia solanacearum
true
Ralstonia solanacearum GMI1000
Eubacteria
Proteobacteria
1
0.998
0.9
1
5,810,922
2
66.98
3,716,413
1
5,062
1,725,241
87.482692
99.94
0
0
373
yes
yes
yes
20
high
154,960
TCCAGCGTGTCGTCCGAACCGGCATGGCGCAGCACCGCGTACCGGCCGCCGGCCAGGGTCTTGCCCACCACCCCGGGCTCGTTCGGCGCCACCGGTGCGGGCGTGGCCGCGCAGATGTCCATGCGGAACGCCTCGGGCGGCGTGTCGTCC
0no label
G000010065
ASM1006v1
GCF_000010065.1
PRJNA224116
SAMD00061073
null
2004/12/16
Nagoya University, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/065/GCF_000010065.1_ASM1006v1
637,000,307
RS_GCF_000010065.1
Monoisolate
Complete Genome
Full
representative genome
Major
269,084
32,046
Synechococcus elongatus PCC 6301
strain=PCC 6301
null
Bacteria
Cyanobacteria
null
Synechococcales
Synechococcaceae
Synechococcus
Synechococcus elongatus
true
Synechococcus elongatus PCC 6301
Eubacteria
Cyanobacteria
1
1
0.9
1
2,696,255
1
55.48
2,696,255
1
2,691
815,460
89.10092
99.73
0
0
342
yes
yes
yes
20
high
2,503,410
TGATGCCCTTCATCGTCGTTTGAGAAGCTTTTTGCAGGACTTCATTGACCTGCTCAGTGATCGTCGGTTTCTCGACTTGAACCACCAAGTCAACGACAGACACGTTTGGCGTAGGAACGCGCAGCGCAATCCCGTTTAGTTTGCCTTTCA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,524,350
TTAATCAATATAGCAAAAGAAAAGAAAAATTCAAAAATAGCAAGAACATATAAGAAACAAAGCATACAATAAGATGCAGAAGAACAAACATCAATTGTAAGACATAAGAATGGATTAAACTCTGCTATTCAAGGGCAAATATTCTCAGAT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,420,300
TCTCTCTTTCTCTCTGTCTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACACACACACACACACTCAGTAAGAGTTCAGGCCAGTTACAAAGGTCAAGGACACAGT
11
G000009725
ASM972v1
GCF_000009725.1
PRJNA224116
SAMD00061113
null
2004/05/11
Kazusa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/725/GCF_000009725.1_ASM972v1
2,514,885,032
RS_GCF_000009725.1
Monoisolate
Complete Genome
Full
representative genome
Major
1,148
1,148
Synechocystis sp. PCC 6803
strain=PCC 6803
null
Bacteria
Cyanobacteria
null
Synechococcales
Merismopediaceae
Synechocystis
Synechocystis sp. PCC 6803
true
Synechocystis sp. PCC 6803 ASM972v1
Eubacteria
Cyanobacteria
1
0.99
0.9
1
3,947,019
5
47.37
3,573,470
1
3,713
1,164,101
86.890968
99.78
0
0
349
yes
yes
yes
20
high
321,620
CCCACTATTAAAGTTAAAATAGGGTTTTCTGTGGATTAACCACGGACGATTTTCCCGTCGATTACATAGAGAGAGTTAATGGTAACCACCCCCACCGCTGCCCCCCGTAAACCGTCCAAGGTAGAAGGCATCAAGGAAAGAAGCAATTAT
0no label
G000008545
ASM854v1
GCF_000008545.1
PRJNA57723
SAMN02603986
null
2001/01/09
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/545/GCF_000008545.1_ASM854v1
637,000,321
RS_GCF_000008545.1
Monoisolate
Complete Genome
Full
reference genome
Major
243,274
2,336
Thermotoga maritima MSB8
strain=MSB8
null
Bacteria
Thermotogae
Thermotogae
Thermotogales
Thermotogaceae
Thermotoga
Thermotoga maritima
true
Thermotoga maritima MSB8 ASM854v1
Eubacteria
Bacteria
1
1
0.9
1
1,860,725
1
46.25
1,860,725
1
1,866
602,696
95.430706
100
1.79
100
312
yes
yes
yes
20
high
1,449,890
AGGAAAAGATGGAAAAGATGGGAATAAGAGCGCTGACGAATGCTTATGTGAAACGTGTTGAGGACAGAAGGGTGATCCTCGTCACCGAACAAGGCATAGAGGAAGTAGAAGTGGGAGCGCTCGTCTACGCGACAGGTGCCAGGGAAAGAC
0no label
G000009545
ASM954v1
GCF_000009545.1
PRJNA224116
SAMEA3138207
null
2009/01/28
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/545/GCF_000009545.1_ASM954v1
643,348,578
RS_GCF_000009545.1
Monoisolate
Complete Genome
Full
representative genome
Major
218,495
1,349
Streptococcus uberis 0140J
strain=0140J
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Streptococcus
Streptococcus uberis
true
Streptococcus uberis 0140J
Eubacteria
Firmicutes
1
1
1
1
1,852,352
1
36.63
1,852,352
1
1,807
559,733
89.025412
100
0
0
291
yes
yes
yes
20
high
1,164,800
TGATATTTGAATATGGAGATAATGCCTTCACTTTTGATGAGGCAACACAAACTATGACTGTCTCTGAATTTGATATTTCACGTCATTTTGAGCAATCCGGAAAGTTGCTCGGTGAGGGTCTACACAAGGAGTATTGGATTCGACATAGTA
0no label
G000007565
ASM756v2
GCF_000007565.2
PRJNA57843
SAMN02603999
null
2016/02/26
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/565/GCF_000007565.2_ASM756v2
637,000,222
RS_GCF_000007565.2
Multiisolate
Complete Genome
Full
reference genome
Major
160,488
303
Pseudomonas putida KT2440
strain=KT2440
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas putida
true
Pseudomonas putida KT2440
Eubacteria
Proteobacteria
1
1
0.9
1
6,181,873
1
61.52
6,181,873
1
5,584
1,861,131
88.706707
99.97
1.2
0
381
yes
yes
yes
20
high
4,414,410
AGCCTTAAGCTTAATCTTTATATCTATAACTGCCACACTATTTGGGATGGATTCCTTTTTAAAAGCAGGCGGAACACTATCCCTCATCCTATCTTTTGTGCAATCCCTTCCTGGCTTCTACATAGCCGCCCTGGCCGCTATTGCAACCTT
0no label
G000008645
ASM864v1
GCF_000008645.1
PRJNA224116
SAMN02603244
null
1999/12/22
Genome Therapeutics Corporation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/645/GCF_000008645.1_ASM864v1
638,154,510
RS_GCF_000008645.1
Monoisolate
Complete Genome
Full
representative genome
Major
187,420
145,262
Methanothermobacter thermautotrophicus str. Delta H
strain=Delta H
null
Archaea
Euryarchaeota
Methanobacteria
Methanobacteriales
Methanobacteriaceae
Methanothermobacter
Methanothermobacter thermautotrophicus
true
Methanothermobacter thermautotrophicus str. Delta H
Archaea
Euryarchaeota
0.99
1
0.9
1
1,751,377
1
49.54
1,751,377
1
1,876
533,233
89.684117
100
0.31
16.67
182
no
yes
yes
19
medium
763,750
TCAGTATCCAGGAGCCCGGCCATGTCATCAGGAGCAAGCTCCCCTTCAGATACCATTAAGAGAGCCCTGACCATCTTACGGACCATCTGCCAGAGGAAACTCTCACCGTAGACATCGATAATGATGGAATCACCGACCTCGGATATCCTG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,372,350
TCCCATCACAGACCTGGAGGCCTAGAAGGAAAAAATGGTTTGTGGGCCAAGCCCAGGATGACCTTGCTGAATGCAGCCTAGGAACTTGGTGCCCTGCGTCCCAGCCACTCCAGCCATAGCTAAAAGGGGACAAGGTACAGCTCGGACTGT
11
G000009345
ASM934v1
GCF_000009345.1
PRJNA57741
SAMEA1705958
null
2007/01/12
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/345/GCF_000009345.1_ASM934v1
640,069,335
RS_GCF_000009345.1
Monoisolate
Complete Genome
Full
reference genome
Major
393,305
630
Yersinia enterocolitica subsp. enterocolitica 8081
strain=8081
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Yersiniaceae
Yersinia
Yersinia enterocolitica
true
Yersinia enterocolitica subsp. enterocolitica 8081
Eubacteria
Proteobacteria
1
0.998
0.9
1
4,683,620
2
47.22
4,615,899
1
4,253
1,352,606
85.086813
99.95
0
0
373
yes
yes
yes
20
high
877,110
GTAAATCTTTTATTTTATACTTGAATTTATCTAAAGAAACGAATGATGTGATTTTTGACAAAATGAATATCGAGGGCCTTTTTCAGAATGTTCGCTTAAAGGATCATAAAAAAATAATTAGCTTTCTTTCGCCAGAACACAATTATGGAC
0no label
G000010825
ASM1082v1
GCF_000010825.1
PRJNA224116
SAMD00060943
null
2009/08/26
Acetobacter pasteurianus genome sequencing consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/825/GCF_000010825.1_ASM1082v1
644,736,321
RS_GCF_000010825.1
Monoisolate
Complete Genome
Full
representative genome
Major
634,452
438
Acetobacter pasteurianus IFO 3283-01
strain=IFO 3283 substr. IFO 3283-01
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhodospirillales
Acetobacteraceae
Acetobacter
Acetobacter pasteurianus
true
Acetobacter pasteurianus IFO 3283-01 IFO 3283 substr. IFO 3283-01
Eubacteria
Proteobacteria
1
0.982
0.9
1
3,340,249
7
53.1
2,907,495
1
3,156
1,006,859
88.810714
100
0
0
352
yes
yes
yes
20
high
1,884,740
ACGGCACAAACCCGCTGGCCGAAGGCCAGGGCAAGGCCCTGCTGACCGTGGACGTGTGGGAACATTCCTACTACCTGGACTTCCGCAACCGTCGTCCGGACTACGTCACCAACTTCCTGGACAAGCTGGCGAATTATGAATTCGCTGAAG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,057,300
CCTCAGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCTCAAGTAGCTGGGACTACAGGCATGCCACCATGCCCCGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTTGCCATGTTGGCCAGGCTGGTCTTGAACTCCTGACC
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,939,650
CCTAGGGTCATGCTAAGAGGTCATACTAAGTCCTCATTCCACCTGCAGATATTATTTATTACTGGCCAGGCATGTGGCTCATGCCTGTAATCTCAGCACTTTGGGAGGCTGAGGCAGGCAGATCACCTGAAGTCAGGAGTTCAAGACCAG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,899,550
GGTCCACCCAACAACAGCAGCCATGTCCTCACCTCTTGCTACAGCAGCAACTTTATTTGATTTGATGTATATGAAGAAATAAAACTCAGAAGTCAATTGACTTAAACATGGAACAATGCAGCTTGGTTATTATGGTGTATGCTAAATTTT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,545,700
GAAAATAAACCAAACACTCTTTTCTCTGCTCTTCTCTCATCACTTGATGCAGAACACTTCTGACACCAAGAGTGTGGGTTCCCCTGACCCCCAGCCATCAATTCAGATCTCCAGCAGACACCAGCTGGGCGTCCTCTAATGCAATTCTCA
11
G000009745
ASM974v1
GCF_000009745.1
PRJNA224116
SAMD00061075
null
2003/10/03
NHRI, Taiwan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/745/GCF_000009745.1_ASM974v1
637,000,337
RS_GCF_000009745.1
Multiisolate
Complete Genome
Full
representative genome
Major
196,600
672
Vibrio vulnificus YJ016
strain=YJ016
null
Bacteria
Proteobacteria
Gammaproteobacteria
Vibrionales
Vibrionaceae
Vibrio
Vibrio vulnificus
true
Vibrio vulnificus YJ016
Eubacteria
Proteobacteria
1
0.996
1
1
5,260,086
3
46.68
3,354,505
1
4,639
1,553,759
87.03525
100
0.14
0
369
yes
yes
yes
20
high
2,367,170
AATTTGCTATCGAAGTGGCGCGTGTGGAAATGTTGTTCCCAGCGTTATTCTTCTGTGTTATCGCATCTGGCTTTGTGAACCCACGAGCTAACTTAGCCGGTAACCACGGTCCAATGATCCCTCTTATCGGCGCGATTGCTCTCGCTGGTG
0no label
G000009345
ASM934v1
GCF_000009345.1
PRJNA57741
SAMEA1705958
null
2007/01/12
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/345/GCF_000009345.1_ASM934v1
640,069,335
RS_GCF_000009345.1
Monoisolate
Complete Genome
Full
reference genome
Major
393,305
630
Yersinia enterocolitica subsp. enterocolitica 8081
strain=8081
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Yersiniaceae
Yersinia
Yersinia enterocolitica
true
Yersinia enterocolitica subsp. enterocolitica 8081
Eubacteria
Proteobacteria
1
0.998
0.9
1
4,683,620
2
47.22
4,615,899
1
4,253
1,352,606
85.086813
99.95
0
0
373
yes
yes
yes
20
high
17,160
AAATGATTGAGTTTGACTTCGAAAGAAACCAAATAAACTCTTGACTCTTCAGCGGGAAAGCGTATTATCTGCCTCCCGCGTTACCGTAAGATTCGCCGCAAGGCAAACGGGTAACGAACGCTCTTTAACAATTTATCAGACAATCTGTGT
0no label
G000005825
ASM582v2
GCF_000005825.2
PRJNA224116
SAMN02603086
null
2010/12/15
Center for Genomic Sciences, Allegheny-Singer Research Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/005/825/GCF_000005825.2_ASM582v2
646,311,908
RS_GCF_000005825.2
Monoisolate
Complete Genome
Full
representative genome
Major
398,511
79,885
Bacillus pseudofirmus OF4
strain=OF4
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus pseudofirmus
true
Bacillus pseudofirmus OF4
Eubacteria
Firmicutes
1
0.995
1
1
4,249,248
3
39.86
3,858,997
1
4,260
1,228,222
85.144124
98.68
1.32
0
377
yes
yes
yes
20
high
3,065,920
TGTACAATTTCATCAGAGTATTTCTCAAGCTCTCCTCGGACAAACTTTCGAACGTCGTGTTCAAATCCAGGGGCTCCTTGTAATTCTGTTAACGTTTTAAACATAGTAAGCGTTTCTTGATTCATGACAAGCTCCTTTCGATTCCCGAAA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,136,350
GTGCAGACGTGTGGCAGGGCAGAGGTAGCACGGCTGTGTCCCAGCTGCAGACTGGAAACCACATATCAATCAGACCCAGGTCACATCTAGAGACACAAAGGGGTGGATAGGAGTTTCCTTGTAGGGGTAGATTTTACTACTTAACCTCCT
11
G000008745
ASM874v1
GCF_000008745.1
PRJNA57811
SAMN02603115
null
1999/12/22
ChGP
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/745/GCF_000008745.1_ASM874v1
637,000,069
RS_GCF_000008745.1
Monoisolate
Complete Genome
Full
reference genome
Major
115,713
83,558
Chlamydophila pneumoniae CWL029
strain=CWL029
null
Bacteria
Chlamydiae
Chlamydiia
Chlamydiales
Chlamydiaceae
Chlamydia
Chlamydia pneumoniae
true
Chlamydophila pneumoniae CWL029
Eubacteria
Chlamydiae
1
1
0.9
1
1,230,230
1
40.58
1,230,230
1
1,063
373,983
89.578859
99.49
0
0
219
yes
yes
yes
20
high
190,970
TGAAAAGGCTCATGCTGCCGCTATGACTAAGAAGGTTGGAAAATTACAAAACATAGATAGGCTTCAAAAAAATAATGAAACGTATGTAAGGATTCAGAATTTTTTTAGAACTTTGATTCAAGAGAAATTAGGGCGTGACACAGTCCAAGA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,935,900
CACGACCTTCTGTCTCCGTGCAGCCGAATGTCAGCCAGTGTTTATCCAGGCTCAAGCTAGGGAGGCCAGTCTCCAGACAAGGGGATCCTGGTTCAGGAGGCTATGGAGTCTTGCTGTACCTCCATCCAAAAGTCCCTGCTTCCTGAGTAT
11
G000010085
ASM1008v1
GCF_000010085.1
PRJNA224116
SAMD00061079
null
2006/01/10
Kitasato Institute for Life Sciences, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/085/GCF_000010085.1_ASM1008v1
637,000,270
RS_GCF_000010085.1
Monoisolate
Complete Genome
Full
representative genome
Major
343,509
63,612
Sodalis glossinidius str. 'morsitans'
strain=morsitans
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Pectobacteriaceae
Sodalis
Sodalis glossinidius
true
Sodalis glossinidius str. 'morsitans' morsitans
Eubacteria
Proteobacteria
1
0.993
1
1
4,292,502
4
54.5
4,171,146
1
5,742
1,142,020
78.310831
100
0
0
357
yes
yes
yes
20
high
359,710
GAAGGCTGGCCATCAATCAACCGGTCATTGCGTTCTGGTTAAGTTCCTCCACTCATTCCAGAACCCGCTGGCAAAAAGGCTGCGGAGGATTATTACGCATAAACGCCGAAGGCGAACCGTAGAAGCGGCCGGCGGAGATTTTAATTTCCC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,137,850
GGAGCTGCCGAGCACTTGAGACGTGGCTAGAAATGAGAGAGGAAGCTCTCATTTTAGAGTTGATTCCCTAAGTTGTCAGAAATTCTGGTTAATTTATGTTAAAGTAGCCGCATGTGGCCAGTGGCTGCTGGTTAGCATAGCTCCATAATG
11
G000008165
ASM816v1
GCF_000008165.1
PRJNA58091
SAMN02598266
null
2004/06/24
DOE Joint Genome Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/165/GCF_000008165.1_ASM816v1
637,000,015
RS_GCF_000008165.1
Monoisolate
Complete Genome
Full
reference genome
Major
260,799
1,392
Bacillus anthracis str. Sterne
strain=Sterne
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus anthracis
true
Bacillus anthracis str. Sterne ASM816v1
Eubacteria
Firmicutes
1
1
1
1
5,228,663
1
35.38
5,228,663
1
5,471
1,495,624
84.251844
99.23
0.15
0
381
yes
yes
yes
20
high
2,214,940
AATCGTACCATGGTCATATAAGAAATTAGGAGCTCGTAAGGTAATTTCTATTGGATTAATTTGTACGGTGATTATCTTTGTTTTATTAAGTTTTGTAAATCACGATACAAACCCTTGGCAAATACGGGCATTATTGTTTGGCATAGGTAT
0no label
G000007085
ASM708v1
GCF_000007085.1
PRJNA224116
SAMN02603009
null
2002/05/14
Beijing Center.HGP
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/085/GCF_000007085.1_ASM708v1
637,000,318
RS_GCF_000007085.1
Monoisolate
Complete Genome
Full
representative genome
Major
273,068
911,092
Caldanaerobacter subterraneus subsp. tengcongensis MB4
strain=MB4
null
Bacteria
Firmicutes
Clostridia
Thermoanaerobacterales
Thermoanaerobacteraceae
Caldanaerobacter
Caldanaerobacter subterraneus
true
Caldanaerobacter subterraneus subsp. tengcongensis MB4
Eubacteria
Firmicutes
1
1
1
1
2,689,445
1
37.57
2,689,445
1
2,674
812,453
88.995016
99.04
0.6
0
329
yes
yes
yes
20
high
814,320
TAGACAAAGACTATAAAGAAAAACTCTCCTACCTGCAATCAACCTTAGGTATCAAGTTCTTACCAGTTTCATGTGCTACATTAAAAGGTATTGAGGAGCTTAAAAACGAGATTGCAAGGTCTGTGCCAGATGTTGGTGAGGATTTACGTA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,891,050
AAACTATGCCTACACATTAGGAGACCTCAGGCCCCTCCCATAATCCAAATCTTGTGGCCTTTCATTAATCTCACAAAGGCAGTTTCAACCCCCAAACAAGGAGGGGATCCATTTTAGAGAGGAACTACTATCATCCTTGCTTCAAAGTTA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,663,250
GGGCGGCGGGGACGGCTGCATGGCGTGGGGGGCCAGGAGCCGGAGCGCCGCGAGGACAGAAGCCGGGCCGCGCGTGCGGCCACGCCGCCGCCGTCTGGGCACCGAGGCGCCCTAGGCTCGCGTCCAGGCGCCCGCCCCGCCCGCGTCCGG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
864,450
CAAGCAATCCTCTCGCCTCAGCCTCCTAAAGTGTTGGGATTACAGGCATGAGCCACCCCACCTGGCCTTATTTATTTTTGCTGTTTAATTTTGGGGGAGACTCGGAGATATTTACTTTCTTGGAAACACAACAGTCTATTAAAAATGTAC
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,124,450
GCTGATTCACAGCTGCTGCTTCCCTCTGAGGGACCACACGCCTGCTCTCACCCAGAATCCTCTAGCAGTTTCTTTTTCTAGAAACAGCTGAAGAACTGCTGAGTAGAAAGAGTCTGCAAACTATCCCGACTGCACTGTATTATTCCATCA
11
G000007465
ASM746v2
GCF_000007465.2
PRJNA57947
SAMN02604090
null
2011/09/01
Univ. Oklahoma
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/465/GCF_000007465.2_ASM746v2
637,000,288
RS_GCF_000007465.2
Monoisolate
Complete Genome
Full
reference genome
Major
210,007
1,309
Streptococcus mutans UA159
strain=UA159
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Streptococcus
Streptococcus mutans
true
Streptococcus mutans UA159
Eubacteria
Firmicutes
1
1
0.9
1
2,032,925
1
36.83
2,032,925
1
1,897
591,301
85.692487
100
0
0
308
yes
yes
yes
20
high
384,020
CTGACAAAAGGAATTGCCAAAGGTTTGGGGATTAAGCAGATGATTAAGAGTCCAACCTATACGATTGTTCGTGAATATGAGGGAAGGCTGCCACTTTATCATTTGGATGTCTATCGAATTGGTGATGATCCTGATTCTATTGATCTGGAT
0no label
G000008505
ASM850v1
GCF_000008505.1
PRJNA58089
SAMN02598265
null
2004/12/27
DOE Joint Genome Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/505/GCF_000008505.1_ASM850v1
637,000,023
RS_GCF_000008505.1
Monoisolate
Complete Genome
Full
reference genome
Major
281,309
1,428
[Bacillus thuringiensis] serovar konkukian str. 97-27
strain=97-27
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus thuringiensis
true
[Bacillus thuringiensis] serovar konkukian str. 97-27
Eubacteria
Firmicutes
1
0.998
1
1
5,314,794
2
35.37
5,237,682
1
5,361
1,516,528
84.049767
99.07
0.31
0
381
yes
yes
yes
20
high
3,985,280
ACCTCCTAAATCCACATTTTTATGCGTGTAACGCTTTTCCATCTACAGCTAATGCTGCTTCACCAATCGCCTCAGATAATGATGGATGCGGATGAATTGTATGTGCTACTTCCCAAGGTGTTGCATCAAGTACTCTTGCAAGACCCGCTT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,263,850
GTGCCTGTGGGCCTGGTGGGGAATGCATAGGGTGTGATTTCTGAATATTATGCAGGGGGCGGGCCAGTTCCACAAGCAGACAGCCGAGAAGTCACAGAGGACCCTGTACTTGGCTTAATGATTTGCTGTCTTAAAATTCCTATTAAAATT
11
G000008665
ASM866v1
GCF_000008665.1
PRJNA224116
SAMN02603985
null
1999/12/22
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/665/GCF_000008665.1_ASM866v1
638,154,502
RS_GCF_000008665.1
Monoisolate
Complete Genome
Full
representative genome
Major
224,325
2,234
Archaeoglobus fulgidus DSM 4304
strain=DSM 4304
null
Archaea
Euryarchaeota
Archaeoglobi
Archaeoglobales
Archaeoglobaceae
Archaeoglobus
Archaeoglobus fulgidus
true
Archaeoglobus fulgidus DSM 4304
Archaea
Euryarchaeota
1
1
0.9
0.9
2,178,400
1
48.58
2,178,400
1
2,518
688,447
93.086761
100
0
0
186
no
yes
yes
17
medium
40,690
TAGGAAGGCTCATAAGGGAGAAAAACCTCGAACTCCTGTTCGATGCGATGAAACTCCTCCCAGAGCTCAATTGCCTCGTAGTTGGGGACGGTCCTGAGAGAGAAAGGCTTTCAAAGATCGCCCCAGCAAACGTCGATTTCGGAGGCTCTC
0no label
G000009825
ASM982v1
GCF_000009825.1
PRJNA224116
SAMD00061074
null
2004/12/30
Kao Corporation, Biological Science Laboratories, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/825/GCF_000009825.1_ASM982v1
637,000,019
RS_GCF_000009825.1
Monoisolate
Complete Genome
Full
representative genome
Major
66,692
79,880
Bacillus clausii KSM-K16
strain=KSM-K16
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus clausii
true
Bacillus clausii KSM-K16
Eubacteria
Firmicutes
1
1
1
1
4,303,871
1
44.75
4,303,871
1
4,304
1,270,194
86.940919
98.67
0.33
0
373
yes
yes
yes
20
high
2,688,140
GATGAAACGAAACAACAAGCGTTGCAAACGTTAATACGCCCGTTTTTGTTGCGCCGTACGAAAAACGACCCTGCTACTGGACTACAACTGCCAAACAAGCGGGAAACGACCGAGTCTGTCCCCCTTTCCCTGGAGCAAGCTGCCCTTTAC
0no label
G000007625
ASM762v1
GCF_000007625.1
PRJNA224116
SAMN02603289
null
2003/02/05
Gottingen Genomics Laboratory
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/625/GCF_000007625.1_ASM762v1
637,000,080
RS_GCF_000007625.1
Monoisolate
Complete Genome
Full
representative genome
Major
212,717
1,513
Clostridium tetani E88
strain=Massachusetts substr. E88
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Clostridiaceae
Clostridium
Clostridium tetani
true
Clostridium tetani E88 Massachusetts substr. E88
Eubacteria
Firmicutes
1
0.997
1
1
2,873,333
2
28.64
2,799,251
1
2,799
856,294
87.797934
98.28
0.14
0
315
yes
yes
yes
20
high
2,149,940
GCCAATTCCCTTGCTTCCATAGCTTTTTTTATTAGTTCTTTATAGTCTATTTTATTCATAACATTCATTCCTTCCATCAGACTAATGTGTCTCTATTTATATCTTTCTATGATAGTAAGTAAATTATACCATACTATCCTCCAAAAATTT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,502,400
TGGCCCCAGGAGACAGCCTGGAAGGTAGGACCATTTGCTTGAGTTCAGGGAACCAGGAATGGGGCAGCTTTCCTAAATAGATGCAGCTGTGTCTTCTACCAGATGTGGAATTGTCATGTTGTTTTTTTTGTTTCGTTTTGTTTTACCTCC
11
G000007985
ASM798v2
GCF_000007985.2
PRJNA57743
SAMN02603989
null
2012/07/31
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/985/GCF_000007985.2_ASM798v2
637,000,120
RS_GCF_000007985.2
Monoisolate
Complete Genome
Full
reference genome
Major
243,231
35,554
Geobacter sulfurreducens PCA
strain=PCA
null
Bacteria
Proteobacteria
Deltaproteobacteria
Desulfuromonadales
Geobacteraceae
Geobacter
Geobacter sulfurreducens
true
Geobacter sulfurreducens PCA
Eubacteria
Proteobacteria
1
1
1
1
3,814,128
1
60.94
3,814,128
1
3,417
1,176,369
90.878544
99.35
0
0
363
yes
yes
yes
20
high
2,124,590
CGTTGTCGTCGACGATCAGCAGTTTTTCCATGGAATCTCCTACCCCCTTACAACCACACCGTAAACATCGCACCCTGTCCGGGCGTACTCTCCACGTCTATTCTCCCGCCGTGTGCCTCCACGATCCGGCGACACTGGTAGAGCCCGATG
0no label
G000011025
ASM1102v1
GCF_000011025.1
PRJNA224116
SAMD00060968
null
2010/01/05
Department of Bacteriology, Osaka Dental University
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/025/GCF_000011025.1_ASM1102v1
646,311,951
RS_GCF_000011025.1
Monoisolate
Complete Genome
Full
representative genome
Major
680,646
43,675
Rothia mucilaginosa DY-18
strain=DY-18
null
Bacteria
Actinobacteria
Actinobacteria
Micrococcales
Micrococcaceae
Rothia
Rothia mucilaginosa
true
Rothia mucilaginosa DY-18
Eubacteria
Actinobacteria
1
1
1
1
2,264,603
1
59.62
2,264,603
1
1,722
637,843
83.000906
99.33
0
0
293
yes
yes
yes
20
high
605,410
GCCATCAAAGAGTTCCTTGTGTATGTTGTGCTCTTCAAAAAATCTACTGTGTGCGTGAGGGACTTCGAAGCTCCGCCGCGGTTTTCCAGTGTATAGGAGCGCTTAGATGGCCGTCGAGAAAAAGAGTCCGGGAATAAAATATGAGAAACA
0no label
G000008865
ASM886v1
GCF_000008865.1
PRJNA57781
SAMN01911278
null
2004/05/11
GIRC
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/865/GCF_000008865.1_ASM886v1
637,000,108
RS_GCF_000008865.1
Monoisolate
Complete Genome
Full
reference genome
Major
386,585
562
Escherichia coli O157:H7 str. Sakai
strain=Sakai substr. RIMD 0509952
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Enterobacteriaceae
Escherichia
Escherichia coli
true
Escherichia coli O157:H7 str. Sakai Sakai substr. RIMD 0509952
Eubacteria
Proteobacteria
1
0.996
0.9
1
5,594,477
3
50.48
5,498,450
1
5,399
1,663,868
87.620737
99.97
0.33
0
374
yes
yes
yes
20
high
3,663,530
TTCTCTTTCACGCGGGCAAAACCGAAAATCTCCCGCTGGCCGGCTTTATCGGTAATTTCTGCGGCGCACTCTTTTTCAAAGCCCGGACGGCACAGCAATACAACCTTATTCATGACTTACGCCCTTGCGCTTTAAACGGATAGCACCAAC
0no label
G000009905
ASM990v1
GCF_000009905.1
PRJNA224116
SAMD00061067
null
2004/09/02
Kitasato Institute for Life Sciences, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/905/GCF_000009905.1_ASM990v1
637,000,306
RS_GCF_000009905.1
Monoisolate
Complete Genome
Full
representative genome
Major
292,459
2,734
Symbiobacterium thermophilum IAM 14863
strain=IAM14863
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Symbiobacteriaceae
Symbiobacterium
Symbiobacterium thermophilum
true
Symbiobacterium thermophilum IAM 14863 IAM14863
Eubacteria
Firmicutes
1
1
1
1
3,566,135
1
68.67
3,566,135
1
3,297
1,051,001
86.832243
98.02
0.03
0
347
yes
yes
yes
20
high
1,170,130
CCGACCGGCCCGCGTGGGGGATGCAGCGGCTGCGGGAGCTGGGGCTGCTGCATCAGTTCGCCCCGGAGCTCCTGGAGATGGTGGGGGTGGAACAGAACCGGTACCACGCCTTCCCCGTGTGGGAGCATTCGCTGATGGCCCTGGCCCTGG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,332,700
CATTTCTGTTGGAAAGATACCTAGGAGTGGAATTGTGGTGTCGTAGTTAACTCTGTTTAACTTTTTGAGGAACTGTTTTCCAAACTTTTCCAAAGTGGTTAGATCATATTACATTCCCACCAGCAAGTATGAGAGTTGTAATTTCTCCAC
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,697,800
ATAAGGAAATATGGGGAAATGGGGGGAATGTCAGGTGGATCAGAGAGATACAGTCATGAGGGTCAGGTGTGGTATCCGGAATAATGTGGGAGGCCGGATTGAAGTCCGGGCCAGGAACAATGGTAATTGTGGGAGACTCAACAAAGAGTG
11
G000007945
ASM794v1
GCF_000007945.1
PRJNA224116
SAMN02604087
null
2003/07/23
Univ. Ohio
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/945/GCF_000007945.1_ASM794v1
637,000,124
RS_GCF_000007945.1
Monoisolate
Complete Genome
Full
representative genome
Major
233,412
730
Haemophilus ducreyi 35000HP
strain=35000HP
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pasteurellales
Pasteurellaceae
Haemophilus
[Haemophilus] ducreyi
true
Haemophilus ducreyi 35000HP
Eubacteria
Proteobacteria
1
1
1
1
1,698,955
1
38.22
1,698,955
1
1,689
506,660
87.856241
99.43
0.02
0
277
yes
yes
yes
20
high
1,115,530
TGCCGTTTGTAGGCTTAATTTACCTTGTTCTATTACAATCGCTTTACCAAATTTCTTTAATAATGCTTCTTGAGTTTTGTTTTCATCAAGGGTATAGATAGGCGTGTTATTTAACATTTTACTCAAGCCGTCAACTAATAATGGTAAAAA
0no label
G000007765
ASM776v1
GCF_000007765.1
PRJNA57631
SAMN02603970
null
2005/07/22
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/765/GCF_000007765.1_ASM776v1
637,000,086
RS_GCF_000007765.2
Monoisolate
Complete Genome
Full
reference genome
Major
227,377
777
Coxiella burnetii RSA 493
strain=RSA 493
null
Bacteria
Proteobacteria
Gammaproteobacteria
Legionellales
Coxiellaceae
Coxiella
Coxiella burnetii
true
Coxiella burnetii RSA 493 ASM776v1
Eubacteria
Proteobacteria
1
0.995
0.9
1
2,032,674
2
42.6
1,995,281
1
2,058
613,036
88.849515
100
0
0
308
yes
yes
yes
20
high
1,132,560
ATACCGTCGTCCAATTAATGATTCGGGCAAATAATCGACGCCAGCTGCAAAGCCGTCTGACTCATCATGTGCATAACGATAATCTTTTCCATAGTCGAGCGATTTCATTAATCGAGTGGGCGCGTTGCGTAGATAAAGCGGTACTTCCAG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,576,350
CCATCCTGGCTAACACTATGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCAGGTGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAATCCGGGAGGCGGAGCTTGCAGTGAGCTGA
11
G000009305
ASM930v1
GCF_000009305.1
PRJNA224116
SAMEA3138199
null
2006/06/28
Penn State Univ.
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/305/GCF_000009305.1_ASM930v1
637,000,130
RS_GCF_000009305.1
Monoisolate
Complete Genome
Full
representative genome
Major
382,638
212
Helicobacter acinonychis str. Sheeba
strain=Sheeba
null
Bacteria
Proteobacteria
Epsilonproteobacteria
Campylobacterales
Helicobacteraceae
Helicobacter
Helicobacter acinonychis
true
Helicobacter acinonychis str. Sheeba
Eubacteria
Proteobacteria
1
0.994
0.9
1
1,557,588
2
38.17
1,553,927
1
1,547
470,618
89.011857
99.12
0.7
100
271
yes
yes
yes
20
high
150,670
ACATGGGTCTATTCTATTGCGTTATTGAAAGTGTATTTTAGCGATGGGACTTATAAAGAAGGCTATGCGACTTTATTAGAAAATGGGCATTATATCGCTTCTTCTGAAACGCTTTATTCCAATGGTTTGTATCCTAAAACGATTTTAGCC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,143,450
TTCTGCCCCTCTGCTCATCTGTCTGTGGATCCTGGAGCTTGGGGTTTATATGAGTACAGGATAGGAGGGCACGGTGGGCTAAAAGGCAACATTTGGGCGCAGAAACAGGATTGCCTGTTCCCATTTAGGGCTGCAGGTTTCCAGGCTTGA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
804,900
GCCGCCCTACCTGGGCCGGCCGGCGATGTGCTGTAAAGGGGCCCGCAGACCCGGCTGCCCAGCACTCCAGAGACGGGCCAAGGCGGGCGGCCGCCTGCAGAAAACCAGACGCCACGGTCACCGCTCGCGAGACCACACAGGCCCGTCGGG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,095,350
ACATGTCCATTCCCAGGTTGTGGTAGTTGGTGTTGTGGTGGCCCTCCTGCCCCTAAGATCCAGGGCACTTGCCAAGCTCTTTAAGTGGTCTTCTTGAAGCCCTGTCACTACATGCAAACTGAGGACTAAGAGACCTGCCACCCCCACTTC
11
G000009345
ASM934v1
GCF_000009345.1
PRJNA57741
SAMEA1705958
null
2007/01/12
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/345/GCF_000009345.1_ASM934v1
640,069,335
RS_GCF_000009345.1
Monoisolate
Complete Genome
Full
reference genome
Major
393,305
630
Yersinia enterocolitica subsp. enterocolitica 8081
strain=8081
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Yersiniaceae
Yersinia
Yersinia enterocolitica
true
Yersinia enterocolitica subsp. enterocolitica 8081
Eubacteria
Proteobacteria
1
0.998
0.9
1
4,683,620
2
47.22
4,615,899
1
4,253
1,352,606
85.086813
99.95
0
0
373
yes
yes
yes
20
high
2,578,810
TGCGGGTTGATCTCATGGCCTATCTATTTGGCGATCTGCTTTCGGTTACATTGAGTGATATCTGGTTGATAGCCGCAGGAGTGGTGGTGGTGCTCGGGATATTGTGCTGGCAATGGCGAGCGTTGCTATCAATGACTATCAGCCCGGAAC
0no label
G000008605
ASM860v1
GCF_000008605.1
PRJNA224116
SAMN02604348
null
1999/12/22
US DOE Joint Genome Institute (JGI-PGF)
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/605/GCF_000008605.1_ASM860v1
637,000,328
GB_GCA_000008605.1
Monoisolate
Complete Genome
Full
representative genome
Major
243,276
160
Treponema pallidum subsp. pallidum str. Nichols
strain=Nichols
null
Bacteria
Spirochaetes
Spirochaetia
Spirochaetales
Spirochaetaceae
Treponema
Treponema pallidum
true
Treponema pallidum subsp. pallidum str. Nichols ASM860v1
Eubacteria
Spirochaetes
0.99
1
1
1
1,138,011
1
52.78
1,138,011
1
1,009
357,124
92.473447
100
0
0
190
yes
yes
yes
20
high
769,860
ACCACCTGCTCATCCCATACGAAAACTTCCTGACCCTCCAGGAAGGCACCAAGACGCGTATGAGATGGCAGGAGCATACGTGGGACCACCGTTTCCGAAAGACGGTCCACCACCTCCATATTACACATTTTTACAGCCTCAATCGTATAC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,056,100
ACAAATGCGTCTCCACTGGGACATCGCTGGGGCATTGAGGGCCCAGGCAGAGGAGTGGTTAGCGAGGGCTGGGGAAGGAGAGCGGCCGGAGCTCCACAGGGAGGTGGCATTGGAGGTGACTCTACCAGCAGGAAAGGGCAGGCAGGGAGC
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
225,600
TGTAACATAATGGCAACTATCTGTGTATCTAAATATATCTAAACATAGGAAACGTACAGTAAAAAAAGGAAACAATCTTATGTGGCCACTACACTACACGCGGTCGGTCATTGACCAAAACATCGTTATGTAGTGCATGACTGCATATCT
11
G000006925
ASM692v2
GCF_000006925.2
PRJNA62907
SAMN02603599
null
2011/08/03
Microbial Genome Center of ChMPH
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/925/GCF_000006925.2_ASM692v2
637,000,264
RS_GCF_000006925.2
Monoisolate
Complete Genome
Full
reference genome
Major
198,214
623
Shigella flexneri 2a str. 301
strain=301
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Enterobacteriaceae
Shigella
Shigella flexneri
true
Shigella flexneri 2a str. 301
Eubacteria
Proteobacteria
1
0.998
1
1
4,828,820
2
50.65
4,607,202
1
5,003
1,415,151
86.329724
99.7
0.21
0
372
yes
yes
yes
20
high
3,085,420
TCTCTGGTTGAAAACTGACGAACTTGCGACTTTCTTTACCTGGACTACTATTTATCTGTCGAAGGAAGACCATACAAAATTCCCGAAAATAAACCATAATTCATCAGGAATAAAAAACGGAATTGAAGTCAGGAAAATACGAACAGTTAC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,334,350
CTGCATAGTGCACTGGGGCAGGGAGGAGAGCTTGGAATCAGGTAGGAAAGAGAATCGTTTAACCAAATAGGGCTGGGTTTTATTAGGCAAAAGGGACCGCAGTGTTACAGAATCTGGGCAAGATGTCACTGAGGGTCTCATTATCTGGAT
11
G000007705
ASM770v1
GCF_000007705.1
PRJNA224116
SAMN02603528
null
2003/08/22
LNCC, Brazil
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/705/GCF_000007705.1_ASM770v1
637,000,074
RS_GCF_000007705.1
Monoisolate
Complete Genome
Full
representative genome
Major
243,365
536
Chromobacterium violaceum ATCC 12472
strain=ATCC 12472
null
Bacteria
Proteobacteria
Betaproteobacteria
Neisseriales
Chromobacteriaceae
Chromobacterium
Chromobacterium violaceum
true
Chromobacterium violaceum ATCC 12472
Eubacteria
Proteobacteria
1
1
0.9
1
4,751,080
1
64.83
4,751,080
1
4,298
1,428,392
88.582238
99.04
0.45
0
372
yes
yes
yes
20
high
553,410
GCCGCGCACCATGCCGCGCAGCAGGCGGATGGCGGCGGCGGGACCGGCGCTGGCATGGGTGAAGACGCCCAGCACGCTGGCCAGCACCGGGAACACCGCCAGCACGCCGCTGAGCGACGGCCCCAGCCTGTCGGACACGCTGGTGATGAT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
414,900
CGGAGAATTTTTGTATTTTTAGTAGAGATGGGGTTTTGCCATGTTGGCCAGGCTGGTCTCGAACTCCTGATCTCAAGTGATCTGCCCGCCTTGGCCTCCCAAAGTGCTGGAATGACAGGTGTGAGCCGCCCCGGTCTTCAAGTATTTAAA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,423,550
CCAGACCTCATACCCCGGAGCCTACGCACGGACTCCTGGCAAGAGAGGCGCCATCCCAGGCCCAGTGCCAGGGCTCCTCTCTCGGTCCTGTCCTCAGGGTGTCCTTGGGCTCCTTCTGGACAGAGGCTCTTCCCTCTCCTGCCAGGTCCT
11
G000009205
ASM920v1
GCF_000009205.1
PRJNA57679
SAMEA1705932
null
2006/09/20
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/205/GCF_000009205.1_ASM920v1
640,069,308
RS_GCF_000009205.1
Monoisolate
Complete Genome
Full
reference genome
Major
272,563
1,496
Clostridioides difficile 630
strain=630
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Peptostreptococcaceae
Clostridioides
Clostridioides difficile
true
Clostridioides difficile 630 ASM920v1
Eubacteria
Firmicutes
1
0.998
0.9
1
4,298,133
2
29.06
4,290,252
1
3,829
1,209,268
82.891874
99.51
0.37
0
340
yes
yes
yes
20
high
3,057,990
AAAAGATAACATAAGTATAAAAACTAAAATTATCATGACATTATTCGTATTTAACTTTCTTCTTTTTTTCAAATATAATCAACCCCTTTGGTTAATAAATACACCTTTAGAGCTTGTTTTTCCTACAAAAAAATTATAATATTTAAAGTC
0no label
G000010605
ASM1060v1
GCF_000010605.1
PRJNA224116
SAMD00060929
null
2008/04/08
The University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/605/GCF_000010605.1_ASM1060v1
641,522,653
RS_GCF_000010605.1
Monoisolate
Complete Genome
Full
representative genome
Major
455,632
1,911
Streptomyces griseus subsp. griseus NBRC 13350
strain=NBRC 13350
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces griseus
true
Streptomyces griseus subsp. griseus NBRC 13350
Eubacteria
Actinobacteria
1
1
1
1
8,545,929
1
72.23
8,545,929
1
7,113
2,547,362
87.837226
99.84
0
0
357
yes
yes
yes
20
high
7,031,050
CATCGACATGATCGTGCGGCGCAACGCCTTCGGCCGGCAGAACGAGTCGTTCGAGGCAGCCGTCGAGGTCGGCGGGGTGGAGGGCGGTCCGGTCGACGGCGTGTTCATCCGCGCTCCGTGGGTCGAGTCCGTCGGGGCCCGGACCGAGGT
0no label
G000007825
ASM782v1
GCF_000007825.1
PRJNA57975
SAMN02603340
null
2004/07/06
INRA
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/825/GCF_000007825.1_ASM782v1
637,000,017
RS_GCF_000007825.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,900
1,396
Bacillus cereus ATCC 14579
strain=ATCC 14579
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus cereus
true
Bacillus cereus ATCC 14579
Eubacteria
Firmicutes
1
0.998
1
1
5,427,083
2
35.29
5,411,809
1
5,541
1,546,426
83.933929
98.18
0.58
18.18
383
yes
yes
yes
20
high
5,357,040
TATTTTTACCGCTTGGACTAGTAAAAGGTATGATTGGTGAAATGTTCTTACCATTCGCCTTAACTATCGTCTTCGCTTTATTAGCATCATTACTAGTAGCAGTTACAATCGTACCGATGCTAGCTCATTCCTTATTTAAGAAAGAGAGCA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,887,900
CAGCTGAGAGCTGGCCAACCTGGGCCCATGCAGAGGGGTTGGGCTGGCAGAGGGGTTGGGGCTGGCAGAGGGGTCGGGGCCTGCAGAGGGGTCAGAGCCGGCAGGAATGTGATCATCCCTTCACTGCCTCATGCTCCCCAGGGCTGGGCT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,330,000
CATCCATCCGTCTTTCTCGAGGCCCAGGTAGTCTTCTAGGTACCAAGAAAATAATGGTGAGTAAAACAGCCCCTGCCCTCTCAGAGCTTGTGTTATGGTTGATAAAAATATGAATTTGAAACAGAACCTGCAAAGTAATCCTCACTTCCT
11
G000010625
ASM1062v1
GCF_000010625.1
PRJNA224116
SAMD00060936
null
2008/01/24
Kazusa DNA Research Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/625/GCF_000010625.1_ASM1062v1
641,522,640
RS_GCF_000010625.1
Monoisolate
Complete Genome
Full
representative genome
Major
449,447
1,126
Microcystis aeruginosa NIES-843
strain=NIES-843
null
Bacteria
Cyanobacteria
null
Chroococcales
Microcystaceae
Microcystis
Microcystis aeruginosa
true
Microcystis aeruginosa NIES-843
Eubacteria
Cyanobacteria
1
1
0.9
1
5,842,795
1
42.33
5,842,795
1
5,605
1,591,543
80.239081
99.89
0.51
25
350
yes
yes
yes
20
high
556,920
CGGTCGTCGTCGGGGACTGTTAACCTATATCCAGAAGAAAGATCAACAACGTTATCAAACCCTGATTGGTCGTCTCGGAATTCGCCGTTAAGCATACCCCCTTTGCATCCCTACCATGGCCTCTGAATCGAAATCGACGGAGAAAAAAGA
0no label
G000009365
ASM936v1
GCF_000009365.1
PRJNA224116
SAMEA3138202
null
2006/07/24
German Research Centre for Biotechnology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/365/GCF_000009365.1_ASM936v1
637,000,004
RS_GCF_000009365.1
Monoisolate
Complete Genome
Full
representative genome
Major
393,595
59,754
Alcanivorax borkumensis SK2
strain=SK2
null
Bacteria
Proteobacteria
Gammaproteobacteria
Oceanospirillales
Alcanivoracaceae
Alcanivorax
Alcanivorax borkumensis
true
Alcanivorax borkumensis SK2
Eubacteria
Proteobacteria
1
1
1
1
3,120,143
1
54.73
3,120,143
1
2,820
929,045
87.73194
100
0
0
352
yes
yes
yes
20
high
571,350
CTGTTCAAGGGTGATCAGGCGTTGCTGATCGTCGTACCCGGCTTCAGAGGGTGCGCCGGGCCAAGGCAGGCCGCGAGCCCAGTACTGCAGTGCGGATACGGGCAGCCAGAAGCCGGTGAGATGCCAGGCCAACTCGCCGGGGCTGCGGGC
0no label
G000006745
ASM674v1
GCF_000006745.1
PRJNA57623
SAMN02603969
null
2001/01/09
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/745/GCF_000006745.1_ASM674v1
637,000,333
RS_GCF_000006745.1
Monoisolate
Complete Genome
Full
reference genome
Major
243,277
666
Vibrio cholerae O1 biovar El Tor str. N16961
strain=N16961
null
Bacteria
Proteobacteria
Gammaproteobacteria
Vibrionales
Vibrionaceae
Vibrio
Vibrio cholerae
true
Vibrio cholerae O1 biovar El Tor str. N16961
Eubacteria
Proteobacteria
1
0.998
0.9
1
4,033,464
2
47.49
2,961,149
1
3,594
1,184,587
86.533164
99.86
0.03
0
360
yes
yes
yes
20
high
3,174,340
TCAAGGAATTACACAATGCGTATCGAACAAGAACTTAAGTTAGGTTTTAAAGATGTCCTGTTTCGCCCGAAACGTTCAACCCTGAAAAGCCGTTCTCAAGTAAATTTAACCCGCGAGTTTACTTTCAAACATAGTGGTCGTCAATGGTCA
0no label
G000007945
ASM794v1
GCF_000007945.1
PRJNA224116
SAMN02604087
null
2003/07/23
Univ. Ohio
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/945/GCF_000007945.1_ASM794v1
637,000,124
RS_GCF_000007945.1
Monoisolate
Complete Genome
Full
representative genome
Major
233,412
730
Haemophilus ducreyi 35000HP
strain=35000HP
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pasteurellales
Pasteurellaceae
Haemophilus
[Haemophilus] ducreyi
true
Haemophilus ducreyi 35000HP
Eubacteria
Proteobacteria
1
1
1
1
1,698,955
1
38.22
1,698,955
1
1,689
506,660
87.856241
99.43
0.02
0
277
yes
yes
yes
20
high
583,310
TGCATTAATTCTGCTGGCGGCTAGCGGATCAATTTGGGTTAATTGTTGATGTAAACTCGCCCAACCATATTGGTTGGCGTGAGCTTCAATTTCTGTACGAATATGTTCATTGGCAGATGGCAAAGGAGAAAGCCCTTCTAGTAGCGCTTT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,736,550
CAGGCTGGAGTGTATTGGCGTGATCTCAGCTCACTGCAACCTCTGCCTCTGGGGTTCAAGTGATTCTCCTGCCTCGCCCTCCCAAGTAGCTGGGATTACAGGTGCACACCGCCAAACCCAGCTAATTTTTTTTGTATTTTAGTAGTGATG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,881,500
CCGGCAGGTGCTGTGCAGTCTGGCCTGTCTCAGCCTCCCCCAGGGTCTGCTCTCAGTGCCTCATTCCTCCTCACCTCCTCCTCTTCCCTGGCGTTGGTCTATCAGGGGTGGAACAGCCACCGGTGTTTCTGATGGGGCCACCTCACCTGG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,893,700
GGAAGGTTCATAATTCAACCCATAGCACCTGAAATTTGTGTTCTGTTTCTTCAGCAAGCATTTTAGCAAATTTACTTTTGGCAGGAAAAGATTGTTATTTGGTGGGAGGCCAAGGTGGGTGGATCACTTGAGGTCAGGAGTTTGAGACCA
11
G000007845
ASM784v1
GCF_000007845.1
PRJNA57909
SAMN02603432
null
2003/04/30
J. Craig Venter Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/845/GCF_000007845.1_ASM784v1
637,000,014
RS_GCF_000007845.1
Monoisolate
Complete Genome
Full
reference genome
Major
198,094
1,392
Bacillus anthracis str. Ames
strain=Ames
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus anthracis
true
Bacillus anthracis str. Ames
Eubacteria
Firmicutes
1
1
1
1
5,227,293
1
35.38
5,227,293
1
5,474
1,495,110
84.244541
99.23
0.15
0
381
yes
yes
yes
20
high
4,420,520
TCTCTTCGTTATATGCATGCCATTGCTGCACTGTATCATTTGGTTTTAAATATAACGTCTCTTCAATTGGCGTTAAAATATCTTCAACGAGTACAATTTCTTTCTTAATAAGCTGATCGTAAATCGCACGGTTAATTAACGTTGCAACTG
0no label

Dataset Card for "autotrain-data-human_dna_classify_150bp"

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