tax_id
int64 1
3.12M
| parent_tax_id
int64 1
3.12M
| rank
stringlengths 5
16
| embl_code
stringlengths 2
2
⌀ | division_id
int64 0
11
| inherited_div_flag
int64 0
1
| genetic_code
int64 1
31
| inherited_gc_flag
int64 0
1
| mitochondrial_genetic_code
int64 0
33
| inherited_mgc_flag
int64 0
1
| genbank_hidden_flag
int64 0
1
| hidden_subtree_root_flag
int64 0
0
| comments
stringclasses 8
values | scientific_name
stringlengths 2
153
| common_name
nulllengths 2
69
⌀ | genbank_common_name
stringlengths 2
57
⌀ | synonym
stringlengths 3
151
⌀ | children_ids
stringlengths 2
391k
| all_children_ids
stringlengths 5
22.1M
|
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 1 | no rank | null | 8 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | null | root | null | null | all | [10239, 131567, 2787823, 2787854] | "{2, 6, 7, 9, 10, 11, 13, 14, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 27, 28, 29, 31, 32, 33, 34, 35(...TRUNCATED) |
2 | 131,567 | superkingdom | null | 0 | 0 | 11 | 0 | 0 | 0 | 0 | 0 | null | Bacteria | null | eubacteria | null | "[1224, 2323, 29547, 32066, 40117, 48479, 49928, 57723, 67818, 68297, 68525, 74152, 200783, 200918, (...TRUNCATED) | "{6, 7, 9, 10, 11, 208415, 13, 14, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 208416, 27, 28, 29, 31, 3(...TRUNCATED) |
6 | 335,928 | genus | null | 0 | 1 | 11 | 1 | 0 | 1 | 0 | 0 | code compliant | Azorhizobium | null | null | null | [7, 281091, 378176, 980631, 2645479] | "{589568, 1799425, 589569, 281091, 589570, 589571, 589572, 7, 345608, 345609, 1038858, 345610, 58957(...TRUNCATED) |
7 | 6 | species | AC | 0 | 1 | 11 | 1 | 0 | 1 | 1 | 0 | code compliant; specified | Azorhizobium caulinodans | null | null | null | [438753] | {438753} |
9 | 32,199 | species | BA | 0 | 1 | 11 | 1 | 0 | 1 | 1 | 0 | code compliant; specified | Buchnera aphidicola | null | null | null | "[98785, 98791, 98792, 98793, 98794, 98795, 98796, 98797, 98798, 98799, 98800, 98801, 98802, 98803, (...TRUNCATED) | "{655378, 655379, 655380, 655381, 655382, 655383, 655384, 655385, 655386, 655387, 1470492, 655388, 6(...TRUNCATED) |
10 | 1,706,371 | genus | null | 0 | 1 | 11 | 1 | 0 | 1 | 0 | 0 | code compliant | Cellvibrio | null | null | null | "[39650, 126348, 126350, 155077, 174585, 180915, 180916, 200905, 1193626, 1237077, 1815559, 2082724,(...TRUNCATED) | "{1537408, 454658, 454659, 454660, 454661, 454662, 1815559, 421896, 126346, 1134474, 126348, 126347,(...TRUNCATED) |
11 | 1,707 | species | CG | 0 | 1 | 11 | 1 | 0 | 1 | 1 | 0 | effective current name;specified | Cellulomonas gilvus | null | null | Cellvibrio gilvus | [593907] | {593907} |
13 | 203,488 | genus | null | 0 | 1 | 11 | 1 | 0 | 1 | 0 | 0 | code compliant | Dictyoglomus | null | null | null | [14, 221212, 513050, 2627482] | "{203489, 1793724, 2010949, 309799, 762092, 28205, 14, 762093, 69007, 595615, 515635, 483028, 483029(...TRUNCATED) |
14 | 13 | species | DT | 0 | 1 | 11 | 1 | 0 | 1 | 1 | 0 | code compliant; specified | Dictyoglomus thermophilum | null | null | null | [309799] | {309799} |
16 | 32,011 | genus | null | 0 | 1 | 11 | 1 | 0 | 1 | 0 | 0 | code compliant | Methylophilus | null | null | null | [17, 45393, 54520, 214633, 313369, 492660, 640084, 640108, 752553, 1971610, 2588534, 2630143] | "{3082881, 3082882, 3082883, 421892, 1853444, 703628, 242832, 17, 1907344, 2876561, 1303189, 1303190(...TRUNCATED) |
End of preview. Expand
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The data is retrieved from NCBI Taxonomy on 1 Feb 2024. Please refer to my GitHub for the detail of data extraction.
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