Dataset Preview
Viewer
The full dataset viewer is not available (click to read why). Only showing a preview of the rows.
Couldn't get the size of external files in `_split_generators` because a request failed: No connection adapters were found for 'ftp://ftp.sra.ebi.ac.uk/vol1/run//ERR173/ERR173157/CTCF_full_AJ_TAGCGA20NGCT_4.fastq.gz' Please consider moving your data files in this dataset repository instead (e.g. inside a data/ folder).
Error code:   ExternalFilesSizeRequestError
Exception:    InvalidSchema
Message:      No connection adapters were found for 'ftp://ftp.sra.ebi.ac.uk/vol1/run//ERR173/ERR173157/CTCF_full_AJ_TAGCGA20NGCT_4.fastq.gz'
Traceback:    Traceback (most recent call last):
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 488, in _is_too_big_from_external_data_files
                  for i, size in enumerate(pool.imap_unordered(get_size, ext_data_files)):
                File "/usr/local/lib/python3.9/multiprocessing/pool.py", line 870, in next
                  raise value
                File "/usr/local/lib/python3.9/multiprocessing/pool.py", line 125, in worker
                  result = (True, func(*args, **kwds))
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 386, in _request_size
                  response = http_head(url, headers=headers, max_retries=3)
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/utils/file_utils.py", line 429, in http_head
                  response = _request_with_retry(
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/utils/file_utils.py", line 328, in _request_with_retry
                  response = requests.request(method=method.upper(), url=url, timeout=timeout, **params)
                File "/src/services/worker/.venv/lib/python3.9/site-packages/requests/api.py", line 59, in request
                  return session.request(method=method, url=url, **kwargs)
                File "/src/services/worker/.venv/lib/python3.9/site-packages/requests/sessions.py", line 589, in request
                  resp = self.send(prep, **send_kwargs)
                File "/src/services/worker/.venv/lib/python3.9/site-packages/requests/sessions.py", line 697, in send
                  adapter = self.get_adapter(url=request.url)
                File "/src/services/worker/.venv/lib/python3.9/site-packages/requests/sessions.py", line 794, in get_adapter
                  raise InvalidSchema(f"No connection adapters were found for {url!r}")
              requests.exceptions.InvalidSchema: No connection adapters were found for 'ftp://ftp.sra.ebi.ac.uk/vol1/run//ERR173/ERR173157/CTCF_full_AJ_TAGCGA20NGCT_4.fastq.gz'

Need help to make the dataset viewer work? Open a discussion for direct support.

id
int32
identifier
string
seq
string
quality
string
count
int32
0
ERR173157:24430
AAAAAAAAAGGATTTGAATT
DDFAFDFI6FF9?DFFE<FB
1
1
ERR173157:69321
AAAAAAAACGAGCGCGGCAA
FFHHHHHJGIIIIIJJIGFF
1
2
ERR173157:8010
AAAAAAAACTGAAGCGTGAG
FFGHHHHJJJJJJJJJFHIJ
1
3
ERR173157:91308
AAAAAAAAGAGAAAGAGGAA
DDHBF@DGABE9FD@FGG8D
1
4
ERR173157:79486
AAAAAAAAGCCCTCACGAAC
FFHHHHHJIJJJJIJJJJIJ
1
5
ERR173157:45910
AAAAAAACAAAAAATGGGAT
FFFHGFFGIIJIGIIIGGGH
1
6
ERR173157:2530
AAAAAAACACAAGAGATTGT
FFHHHGFJIJJJJGIIJJIE
1
7
ERR173157:113115
AAAAAAACCAACGGGGATCA
FFHHHHHJJJJJJJJJIJJI
1
8
ERR173157:1134
AAAAAAAGAATGATGCGACG
FFHHHHHJIJJJJJJJJJJJ
1
9
ERR173157:17182
AAAAAAAGTAAACAAGGGTC
FFHHHHHJCGHJJJJJJJBG
1
10
ERR173157:35040
AAAAAAAGTGGGTAAAGAAC
DDHHHH:D?DEE?FHGDHII
1
11
ERR173157:34849
AAAAAAATTGTTGCGCCGCG
FFHHHHHJJJJJJJJJJJJJ
1
12
ERR173157:102634
AAAAAACAAAGTGAGCAGTT
FFHHHHHJJJJIIIJJJJIJ
1
13
ERR173157:107040
AAAAAACAAATAATGATACG
D@FFFDHHGIIGGEHH@EG?
1
14
ERR173157:124612
AAAAAACAAGTGCACCGTAC
FFHHHHGJJJHIIJJIIGGI
1
15
ERR173157:67840
AAAAAACACAAGGAAGACGT
DA?CDD::??CE8:CD;:BA
1
16
ERR173157:80791
AAAAAACACCACTAGGTGGC
FFHHHHHJJJJJJJJJGHII
1
17
ERR173157:118458
AAAAAACACCATGCACCCCA
680@3DADED;)1CDDD;DD
1
18
ERR173157:10293
AAAAAACCTAAAACTAAGCG
FFHHHHHJJJJJJJJJJJJJ
2
19
ERR173157:31008
AAAAAACGGCTCACCTTGTG
FFHHHHHJJJJJJJJJJGHI
1
20
ERR173157:11720
AAAAAACGTACTCCCGGTGC
FFHHHHHJGHHIIJJJJFII
1
21
ERR173157:61790
AAAAAACGTAGGATGTTACG
DDDFHDD@H@C;DGGFHHCE
1
22
ERR173157:80302
AAAAAAGAGGAACAGTGTGA
FFHHHHHIJJJJJJJGIGHG
1
23
ERR173157:97705
AAAAAAGATAAAAAACCGGG
DDDHFHAFIEHGIG@HHIIE
1
24
ERR173157:83524
AAAAAAGGAAATTACGGATG
FFHHHHHJJJJJJJJJJJJJ
1
25
ERR173157:112492
AAAAAAGGAAGTGAACATGT
DFHHHHDEHII9:DB?G>GB
1
26
ERR173157:114138
AAAAAAGGAGCAGACAAAGA
FFHHHHHJHIJJJJJJJJJJ
1
27
ERR173157:113911
AAAAAAGGATGCACTAAACG
FFHHHHHJJJJJJJJJJJJJ
1
28
ERR173157:107680
AAAAAAGGGATGTGACAAAT
FFHGHHHJJIJJIJJJJJJJ
1
29
ERR173157:113776
AAAAAAGGGGAATGCCGAAT
FFHHHHHJJJJJIJJIJJJJ
1
30
ERR173157:22720
AAAAAAGTAATTAAGAACGC
FFGHHHHEFHIJJJIIJJJJ
1
31
ERR173157:106139
AAAAAAGTATGAGGAACGAC
FFHHHHHEHIJJJJJJJJJJ
1
32
ERR173157:16152
AAAAAATATGCCACCGAACT
@DF?D@FBEGGDHIG<G@HH
1
33
ERR173157:12006
AAAAAATGAATAGGGAAACA
FFHHHHHJIIIGIJJJIIJI
1
34
ERR173157:2729
AAAAAATGATAAAGGGGGAG
FFHHHHHJJJJJJJJJJJFI
1
35
ERR173157:5740
AAAAAATGGTGTACGACCAG
FFHHHHHJIFGFFFHIJJJJ
1
36
ERR173157:16947
AAAAAATGTGGAATACGCGA
FFHHHGHJGIIJJJJJJIJI
1
37
ERR173157:11033
AAAAACAACCAGCAGGGGGC
FFHHHHHIIIIJJJJJJIJD
1
38
ERR173157:35464
AAAAACACAAAAATGATACG
FFHHHHHJJJJJJJJJJJJJ
3
39
ERR173157:29510
AAAAACACAACACCCCCACG
FDDHHDFGHIIIIIGGAD??
1
40
ERR173157:52661
AAAAACACGGAAAATATAGG
FFHHHHHJJJJJJJJJIIJJ
1
41
ERR173157:7060
AAAAACACGGTAAGGACTTA
FFHHHHHJJJFIJJJJJJJI
1
42
ERR173157:55584
AAAAACAGCCACTAGGTGGC
DFHDADFEFE@DFHHICDHH
1
43
ERR173157:11450
AAAAACATACGCTAGGTGGC
FFGHHGHJIJJEHIJJDHID
3
44
ERR173157:51161
AAAAACCAAACATAATTTGA
FFHHHHGJJJJJHIJJIJII
2
45
ERR173157:124537
AAAAACCCAATTGTAACGGC
DADCF?FEHICHG?E?<C:0
1
46
ERR173157:91643
AAAAACCCAGTTGTTCCCGG
FFHHHF?EHGFGCFGEEGGB
1
47
ERR173157:93676
AAAAACCCCTGCTGAATGGG
FFHHHHHJIJJJJJIIIJJJ
1
48
ERR173157:1141
AAAAACGAAACGTGTCATAG
DDHHHHFGGIIIJJ?FHGFI
1
49
ERR173157:121144
AAAAACGAAGTTCGTGCCAT
FFHGHHHJJJIIJIHGHIJJ
1
50
ERR173157:84344
AAAAACGACCAATAGATGGC
FFHHHHHJJJJJJJJJJJJJ
2
51
ERR173157:54724
AAAAACGACCACCAGGTGTC
FFHFDFHIIEIIIIIIFH?F
1
52
ERR173157:110136
AAAAACGGCCACAAGGGGGC
DDF?HHHI:CDGGIHHIIGE
1
53
ERR173157:51657
AAAAACGGGCCACGCACACT
FFHHHHHJJIJJJJJJJJJJ
1
54
ERR173157:24611
AAAAACGTCCACTAGGTGGC
:DDFAFAGB;@EG@9B*:CF
1
55
ERR173157:58915
AAAAACTACAGCTAGGTGGC
FFHGGHDGGEHI>FGH?BDD
1
56
ERR173157:67450
AAAAACTACCAGCAGGTGGC
DDAHHFHEF@BGICB;CFEH
2
57
ERR173157:40286
AAAAACTCCACTGCTGCCAT
DDF:DFHIGIIIIGDFEHIE
1
58
ERR173157:46698
AAAAACTGAACCCAAACCGG
DDFF?CB@F@FFIFIBBCDF
1
59
ERR173157:58256
AAAAACTGACGTTTGACAAG
FFGHHHHJJJJIJIIHJJJJ
1
60
ERR173157:81579
AAAAACTGCCACTAGAGGGC
DFFFHFDGBHHIIHHIIIHE
1
61
ERR173157:70682
AAAAACTGCCGCTAGGTGGC
FFHHHHHJJJJJJJJJBFHI
1
62
ERR173157:98748
AAAAACTTGAGAATGACTCG
DDHFFHFIIEHEI>FHHGEC
1
63
ERR173157:40490
AAAAACTTGGTGTAGAAGAA
DFHFFHDGIIGIEGEGGEHJ
2
64
ERR173157:76160
AAAAAGAAGAAAAGAATGAG
FFHHHHHJJJGIJJJJJJJJ
1
65
ERR173157:106179
AAAAAGAAGAAAGTGAATGG
FFHHHHHJJJJIIGHGJJJJ
1
66
ERR173157:15607
AAAAAGAAGGTAGAGGATAA
FFHHHHGJJJFHGJJJJJJJ
1
67
ERR173157:50569
AAAAAGAATGCACGATAGCG
DDHHHHHGGI9AFHAGF@BD
1
68
ERR173157:50926
AAAAAGACCTTAACTAGTAC
FFGHHHHJJJJJJJJJJHIG
1
69
ERR173157:109711
AAAAAGACGACGTACGTGCT
FFHHHHHIIJGIIGGHDFGG
1
70
ERR173157:33876
AAAAAGAGAAAGATAATGGC
FFHHHHGJJJJJIJIJJIJJ
1
71
ERR173157:97361
AAAAAGAGAGTTTCAAATAC
FFHHHHHGHGEGEGIIJJGI
1
72
ERR173157:93387
AAAAAGATAGTACCGTCATA
FFHHHHHJJIGHIIIGIIJJ
1
73
ERR173157:101031
AAAAAGATGAAAAACCTAAA
DDDHHF?BGIIIHIGIIIGI
1
74
ERR173157:43169
AAAAAGATGGTAGATAAGGT
FFHHHHFGIJEHGIGGIJI?
1
75
ERR173157:76072
AAAAAGATTGGTATTGTGGG
FFHHHHGJJJJFHIJJIJJJ
1
76
ERR173157:79694
AAAAAGCGAAATGAGGGGGC
FFHFHHGJJIJJJIJJJJJI
1
77
ERR173157:110303
AAAAAGCGGGAAATGTTCAG
FFHHHHHJJJIJGIJHIIII
1
78
ERR173157:30460
AAAAAGGACGACATTGGCAT
FFHHHHHJJJJJJJJJJJJJ
1
79
ERR173157:31733
AAAAAGGATCAAGTTCGCTG
FFHHHHGHIJBFGFHIIIGI
1
80
ERR173157:16233
AAAAAGGCGAAAGGAGGGGA
FFHHHHHJJJIJJJGIJJI@
1
81
ERR173157:72967
AAAAAGGGCGACAAATGCAC
FFHHHHHJJJJJJJJJJJJI
1
82
ERR173157:48649
AAAAAGGTACTCTTTCAATA
ADHHHHH9CFHHIIJJJIGG
1
83
ERR173157:115809
AAAAAGGTCAGGACATGTGA
FFHHGGHFHHIJIGJJJIIG
1
84
ERR173157:70787
AAAAAGGTGACCGAGTACGA
DFHHHHGHIIJIIIEBDHGG
1
85
ERR173157:107517
AAAAAGTCGAGTTTTGCGGA
FFHHHDCFHFHHIHIECFAF
2
86
ERR173157:13978
AAAAAGTGAAATAAGACTGT
DD:3<C+2<<A@FEA9::::
1
87
ERR173157:122868
AAAAATAACGTAACCCGTTC
FFHHHHHJJJGIJJJJJJJJ
1
88
ERR173157:69519
AAAAATAGGATCTCACGCCT
FFHHHHHJJJJJJJJJJJJJ
1
89
ERR173157:94097
AAAAATATGCGACCGAATAA
FFHHGHHIGEHHIEGIIGIG
1
90
ERR173157:14022
AAAAATCGCCACTAGGTGGC
FFHHHHHJJJJJJJJJDGIJ
1
91
ERR173157:25947
AAAAATCTGGAATGTAAAGG
FFHHGHHJJJJJJJHIIIJJ
1
92
ERR173157:86127
AAAAATCTTGGCGACCACTC
FFHHHHHJJJJJJJJJIJJJ
1
93
ERR173157:7799
AAAAATGAACTTGCGATCAC
FFHHHHHJJJJJJJJJJJJJ
1
94
ERR173157:6408
AAAAATGAGAATGACACCCG
FFHHHHHIJJJJJJJJJJJJ
1
95
ERR173157:107711
AAAAATGAGGAACACTCGGG
FFHHHHHJJJJJJJJJJJJJ
1
96
ERR173157:37901
AAAAATGATACGGTTCGTAG
FFHHHHHJIIIJJFHIJHGG
1
97
ERR173157:98152
AAAAATGCACACTAGATGGC
FFHHGHHJJJJJJGH*1@FD
1
98
ERR173157:122516
AAAAATGCACACTAGGTGGC
ADAHDDDFH>GAHIIIGBGH
1
99
ERR173157:70963
AAAAATGGAGGGCGACCACC
ADDAAFDGBHGIIDHGIGIG
1
End of preview.
README.md exists but content is empty. Use the Edit dataset card button to edit it.
Downloads last month
0
Edit dataset card