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Couldn't get the size of external files in `_split_generators` because a request failed:
No connection adapters were found for 'ftp://ftp.sra.ebi.ac.uk/vol1/run//ERR173/ERR173157/CTCF_full_AJ_TAGCGA20NGCT_4.fastq.gz'
Please consider moving your data files in this dataset repository instead (e.g. inside a data/ folder).
Error code: ExternalFilesSizeRequestError Exception: InvalidSchema Message: No connection adapters were found for 'ftp://ftp.sra.ebi.ac.uk/vol1/run//ERR173/ERR173157/CTCF_full_AJ_TAGCGA20NGCT_4.fastq.gz' Traceback: Traceback (most recent call last): File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 488, in _is_too_big_from_external_data_files for i, size in enumerate(pool.imap_unordered(get_size, ext_data_files)): File "/usr/local/lib/python3.9/multiprocessing/pool.py", line 870, in next raise value File "/usr/local/lib/python3.9/multiprocessing/pool.py", line 125, in worker result = (True, func(*args, **kwds)) File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 386, in _request_size response = http_head(url, headers=headers, max_retries=3) File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/utils/file_utils.py", line 429, in http_head response = _request_with_retry( File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/utils/file_utils.py", line 328, in _request_with_retry response = requests.request(method=method.upper(), url=url, timeout=timeout, **params) File "/src/services/worker/.venv/lib/python3.9/site-packages/requests/api.py", line 59, in request return session.request(method=method, url=url, **kwargs) File "/src/services/worker/.venv/lib/python3.9/site-packages/requests/sessions.py", line 589, in request resp = self.send(prep, **send_kwargs) File "/src/services/worker/.venv/lib/python3.9/site-packages/requests/sessions.py", line 697, in send adapter = self.get_adapter(url=request.url) File "/src/services/worker/.venv/lib/python3.9/site-packages/requests/sessions.py", line 794, in get_adapter raise InvalidSchema(f"No connection adapters were found for {url!r}") requests.exceptions.InvalidSchema: No connection adapters were found for 'ftp://ftp.sra.ebi.ac.uk/vol1/run//ERR173/ERR173157/CTCF_full_AJ_TAGCGA20NGCT_4.fastq.gz'
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id
int32 | identifier
string | seq
string | quality
string | count
int32 |
---|---|---|---|---|
0 | ERR173157:24430 | AAAAAAAAAGGATTTGAATT | DDFAFDFI6FF9?DFFE<FB | 1 |
1 | ERR173157:69321 | AAAAAAAACGAGCGCGGCAA | FFHHHHHJGIIIIIJJIGFF | 1 |
2 | ERR173157:8010 | AAAAAAAACTGAAGCGTGAG | FFGHHHHJJJJJJJJJFHIJ | 1 |
3 | ERR173157:91308 | AAAAAAAAGAGAAAGAGGAA | DDHBF@DGABE9FD@FGG8D | 1 |
4 | ERR173157:79486 | AAAAAAAAGCCCTCACGAAC | FFHHHHHJIJJJJIJJJJIJ | 1 |
5 | ERR173157:45910 | AAAAAAACAAAAAATGGGAT | FFFHGFFGIIJIGIIIGGGH | 1 |
6 | ERR173157:2530 | AAAAAAACACAAGAGATTGT | FFHHHGFJIJJJJGIIJJIE | 1 |
7 | ERR173157:113115 | AAAAAAACCAACGGGGATCA | FFHHHHHJJJJJJJJJIJJI | 1 |
8 | ERR173157:1134 | AAAAAAAGAATGATGCGACG | FFHHHHHJIJJJJJJJJJJJ | 1 |
9 | ERR173157:17182 | AAAAAAAGTAAACAAGGGTC | FFHHHHHJCGHJJJJJJJBG | 1 |
10 | ERR173157:35040 | AAAAAAAGTGGGTAAAGAAC | DDHHHH:D?DEE?FHGDHII | 1 |
11 | ERR173157:34849 | AAAAAAATTGTTGCGCCGCG | FFHHHHHJJJJJJJJJJJJJ | 1 |
12 | ERR173157:102634 | AAAAAACAAAGTGAGCAGTT | FFHHHHHJJJJIIIJJJJIJ | 1 |
13 | ERR173157:107040 | AAAAAACAAATAATGATACG | D@FFFDHHGIIGGEHH@EG? | 1 |
14 | ERR173157:124612 | AAAAAACAAGTGCACCGTAC | FFHHHHGJJJHIIJJIIGGI | 1 |
15 | ERR173157:67840 | AAAAAACACAAGGAAGACGT | DA?CDD::??CE8:CD;:BA | 1 |
16 | ERR173157:80791 | AAAAAACACCACTAGGTGGC | FFHHHHHJJJJJJJJJGHII | 1 |
17 | ERR173157:118458 | AAAAAACACCATGCACCCCA | 680@3DADED;)1CDDD;DD | 1 |
18 | ERR173157:10293 | AAAAAACCTAAAACTAAGCG | FFHHHHHJJJJJJJJJJJJJ | 2 |
19 | ERR173157:31008 | AAAAAACGGCTCACCTTGTG | FFHHHHHJJJJJJJJJJGHI | 1 |
20 | ERR173157:11720 | AAAAAACGTACTCCCGGTGC | FFHHHHHJGHHIIJJJJFII | 1 |
21 | ERR173157:61790 | AAAAAACGTAGGATGTTACG | DDDFHDD@H@C;DGGFHHCE | 1 |
22 | ERR173157:80302 | AAAAAAGAGGAACAGTGTGA | FFHHHHHIJJJJJJJGIGHG | 1 |
23 | ERR173157:97705 | AAAAAAGATAAAAAACCGGG | DDDHFHAFIEHGIG@HHIIE | 1 |
24 | ERR173157:83524 | AAAAAAGGAAATTACGGATG | FFHHHHHJJJJJJJJJJJJJ | 1 |
25 | ERR173157:112492 | AAAAAAGGAAGTGAACATGT | DFHHHHDEHII9:DB?G>GB | 1 |
26 | ERR173157:114138 | AAAAAAGGAGCAGACAAAGA | FFHHHHHJHIJJJJJJJJJJ | 1 |
27 | ERR173157:113911 | AAAAAAGGATGCACTAAACG | FFHHHHHJJJJJJJJJJJJJ | 1 |
28 | ERR173157:107680 | AAAAAAGGGATGTGACAAAT | FFHGHHHJJIJJIJJJJJJJ | 1 |
29 | ERR173157:113776 | AAAAAAGGGGAATGCCGAAT | FFHHHHHJJJJJIJJIJJJJ | 1 |
30 | ERR173157:22720 | AAAAAAGTAATTAAGAACGC | FFGHHHHEFHIJJJIIJJJJ | 1 |
31 | ERR173157:106139 | AAAAAAGTATGAGGAACGAC | FFHHHHHEHIJJJJJJJJJJ | 1 |
32 | ERR173157:16152 | AAAAAATATGCCACCGAACT | @DF?D@FBEGGDHIG<G@HH | 1 |
33 | ERR173157:12006 | AAAAAATGAATAGGGAAACA | FFHHHHHJIIIGIJJJIIJI | 1 |
34 | ERR173157:2729 | AAAAAATGATAAAGGGGGAG | FFHHHHHJJJJJJJJJJJFI | 1 |
35 | ERR173157:5740 | AAAAAATGGTGTACGACCAG | FFHHHHHJIFGFFFHIJJJJ | 1 |
36 | ERR173157:16947 | AAAAAATGTGGAATACGCGA | FFHHHGHJGIIJJJJJJIJI | 1 |
37 | ERR173157:11033 | AAAAACAACCAGCAGGGGGC | FFHHHHHIIIIJJJJJJIJD | 1 |
38 | ERR173157:35464 | AAAAACACAAAAATGATACG | FFHHHHHJJJJJJJJJJJJJ | 3 |
39 | ERR173157:29510 | AAAAACACAACACCCCCACG | FDDHHDFGHIIIIIGGAD?? | 1 |
40 | ERR173157:52661 | AAAAACACGGAAAATATAGG | FFHHHHHJJJJJJJJJIIJJ | 1 |
41 | ERR173157:7060 | AAAAACACGGTAAGGACTTA | FFHHHHHJJJFIJJJJJJJI | 1 |
42 | ERR173157:55584 | AAAAACAGCCACTAGGTGGC | DFHDADFEFE@DFHHICDHH | 1 |
43 | ERR173157:11450 | AAAAACATACGCTAGGTGGC | FFGHHGHJIJJEHIJJDHID | 3 |
44 | ERR173157:51161 | AAAAACCAAACATAATTTGA | FFHHHHGJJJJJHIJJIJII | 2 |
45 | ERR173157:124537 | AAAAACCCAATTGTAACGGC | DADCF?FEHICHG?E?<C:0 | 1 |
46 | ERR173157:91643 | AAAAACCCAGTTGTTCCCGG | FFHHHF?EHGFGCFGEEGGB | 1 |
47 | ERR173157:93676 | AAAAACCCCTGCTGAATGGG | FFHHHHHJIJJJJJIIIJJJ | 1 |
48 | ERR173157:1141 | AAAAACGAAACGTGTCATAG | DDHHHHFGGIIIJJ?FHGFI | 1 |
49 | ERR173157:121144 | AAAAACGAAGTTCGTGCCAT | FFHGHHHJJJIIJIHGHIJJ | 1 |
50 | ERR173157:84344 | AAAAACGACCAATAGATGGC | FFHHHHHJJJJJJJJJJJJJ | 2 |
51 | ERR173157:54724 | AAAAACGACCACCAGGTGTC | FFHFDFHIIEIIIIIIFH?F | 1 |
52 | ERR173157:110136 | AAAAACGGCCACAAGGGGGC | DDF?HHHI:CDGGIHHIIGE | 1 |
53 | ERR173157:51657 | AAAAACGGGCCACGCACACT | FFHHHHHJJIJJJJJJJJJJ | 1 |
54 | ERR173157:24611 | AAAAACGTCCACTAGGTGGC | :DDFAFAGB;@EG@9B*:CF | 1 |
55 | ERR173157:58915 | AAAAACTACAGCTAGGTGGC | FFHGGHDGGEHI>FGH?BDD | 1 |
56 | ERR173157:67450 | AAAAACTACCAGCAGGTGGC | DDAHHFHEF@BGICB;CFEH | 2 |
57 | ERR173157:40286 | AAAAACTCCACTGCTGCCAT | DDF:DFHIGIIIIGDFEHIE | 1 |
58 | ERR173157:46698 | AAAAACTGAACCCAAACCGG | DDFF?CB@F@FFIFIBBCDF | 1 |
59 | ERR173157:58256 | AAAAACTGACGTTTGACAAG | FFGHHHHJJJJIJIIHJJJJ | 1 |
60 | ERR173157:81579 | AAAAACTGCCACTAGAGGGC | DFFFHFDGBHHIIHHIIIHE | 1 |
61 | ERR173157:70682 | AAAAACTGCCGCTAGGTGGC | FFHHHHHJJJJJJJJJBFHI | 1 |
62 | ERR173157:98748 | AAAAACTTGAGAATGACTCG | DDHFFHFIIEHEI>FHHGEC | 1 |
63 | ERR173157:40490 | AAAAACTTGGTGTAGAAGAA | DFHFFHDGIIGIEGEGGEHJ | 2 |
64 | ERR173157:76160 | AAAAAGAAGAAAAGAATGAG | FFHHHHHJJJGIJJJJJJJJ | 1 |
65 | ERR173157:106179 | AAAAAGAAGAAAGTGAATGG | FFHHHHHJJJJIIGHGJJJJ | 1 |
66 | ERR173157:15607 | AAAAAGAAGGTAGAGGATAA | FFHHHHGJJJFHGJJJJJJJ | 1 |
67 | ERR173157:50569 | AAAAAGAATGCACGATAGCG | DDHHHHHGGI9AFHAGF@BD | 1 |
68 | ERR173157:50926 | AAAAAGACCTTAACTAGTAC | FFGHHHHJJJJJJJJJJHIG | 1 |
69 | ERR173157:109711 | AAAAAGACGACGTACGTGCT | FFHHHHHIIJGIIGGHDFGG | 1 |
70 | ERR173157:33876 | AAAAAGAGAAAGATAATGGC | FFHHHHGJJJJJIJIJJIJJ | 1 |
71 | ERR173157:97361 | AAAAAGAGAGTTTCAAATAC | FFHHHHHGHGEGEGIIJJGI | 1 |
72 | ERR173157:93387 | AAAAAGATAGTACCGTCATA | FFHHHHHJJIGHIIIGIIJJ | 1 |
73 | ERR173157:101031 | AAAAAGATGAAAAACCTAAA | DDDHHF?BGIIIHIGIIIGI | 1 |
74 | ERR173157:43169 | AAAAAGATGGTAGATAAGGT | FFHHHHFGIJEHGIGGIJI? | 1 |
75 | ERR173157:76072 | AAAAAGATTGGTATTGTGGG | FFHHHHGJJJJFHIJJIJJJ | 1 |
76 | ERR173157:79694 | AAAAAGCGAAATGAGGGGGC | FFHFHHGJJIJJJIJJJJJI | 1 |
77 | ERR173157:110303 | AAAAAGCGGGAAATGTTCAG | FFHHHHHJJJIJGIJHIIII | 1 |
78 | ERR173157:30460 | AAAAAGGACGACATTGGCAT | FFHHHHHJJJJJJJJJJJJJ | 1 |
79 | ERR173157:31733 | AAAAAGGATCAAGTTCGCTG | FFHHHHGHIJBFGFHIIIGI | 1 |
80 | ERR173157:16233 | AAAAAGGCGAAAGGAGGGGA | FFHHHHHJJJIJJJGIJJI@ | 1 |
81 | ERR173157:72967 | AAAAAGGGCGACAAATGCAC | FFHHHHHJJJJJJJJJJJJI | 1 |
82 | ERR173157:48649 | AAAAAGGTACTCTTTCAATA | ADHHHHH9CFHHIIJJJIGG | 1 |
83 | ERR173157:115809 | AAAAAGGTCAGGACATGTGA | FFHHGGHFHHIJIGJJJIIG | 1 |
84 | ERR173157:70787 | AAAAAGGTGACCGAGTACGA | DFHHHHGHIIJIIIEBDHGG | 1 |
85 | ERR173157:107517 | AAAAAGTCGAGTTTTGCGGA | FFHHHDCFHFHHIHIECFAF | 2 |
86 | ERR173157:13978 | AAAAAGTGAAATAAGACTGT | DD:3<C+2<<A@FEA9:::: | 1 |
87 | ERR173157:122868 | AAAAATAACGTAACCCGTTC | FFHHHHHJJJGIJJJJJJJJ | 1 |
88 | ERR173157:69519 | AAAAATAGGATCTCACGCCT | FFHHHHHJJJJJJJJJJJJJ | 1 |
89 | ERR173157:94097 | AAAAATATGCGACCGAATAA | FFHHGHHIGEHHIEGIIGIG | 1 |
90 | ERR173157:14022 | AAAAATCGCCACTAGGTGGC | FFHHHHHJJJJJJJJJDGIJ | 1 |
91 | ERR173157:25947 | AAAAATCTGGAATGTAAAGG | FFHHGHHJJJJJJJHIIIJJ | 1 |
92 | ERR173157:86127 | AAAAATCTTGGCGACCACTC | FFHHHHHJJJJJJJJJIJJJ | 1 |
93 | ERR173157:7799 | AAAAATGAACTTGCGATCAC | FFHHHHHJJJJJJJJJJJJJ | 1 |
94 | ERR173157:6408 | AAAAATGAGAATGACACCCG | FFHHHHHIJJJJJJJJJJJJ | 1 |
95 | ERR173157:107711 | AAAAATGAGGAACACTCGGG | FFHHHHHJJJJJJJJJJJJJ | 1 |
96 | ERR173157:37901 | AAAAATGATACGGTTCGTAG | FFHHHHHJIIIJJFHIJHGG | 1 |
97 | ERR173157:98152 | AAAAATGCACACTAGATGGC | FFHHGHHJJJJJJGH*1@FD | 1 |
98 | ERR173157:122516 | AAAAATGCACACTAGGTGGC | ADAHDDDFH>GAHIIIGBGH | 1 |
99 | ERR173157:70963 | AAAAATGGAGGGCGACCACC | ADDAAFDGBHGIIDHGIGIG | 1 |
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