Patent Application: US-201615261335-A

Abstract:
the present invention includes a method of introducing a pathogenic infection into one or more peripheral lymph nodes of an animal for testing of meat , comprising : inoculating at one or more peripheral lymph node drainage areas the animal with a known amount of a known pathogen ; harvesting one or more peripheral lymph nodes from the animal ; grinding meat or meat trimmings and the one or more peripheral lymph nodes into ground meat ; and determining a ratio of a number of peripheral lymph nodes infected to the weight of the meat or meat trimmings used to create the ground meat , wherein the infected ground meat can be used to test interventions against the known pathogen in a grinding process .

Description:
while the making and using of various embodiments of the present invention are discussed in detail below , it should be appreciated that the present invention provides many applicable inventive concepts that can be embodied in a wide variety of specific contexts . the specific embodiments discussed herein are merely illustrative of specific ways to make and use the invention and do not delimit the scope of the invention . to facilitate the understanding of this invention , a number of terms are defined below . terms defined herein have meanings as commonly understood by a person of ordinary skill in the areas relevant to the present invention . terms such as “ a ”, “ an ” and “ the ” are not intended to refer to only a singular entity , but include the general class of which a specific example may be used for illustration . the terminology herein is used to describe specific embodiments of the invention , but their usage does not delimit the invention , except as outlined in the claims . the present inventors developed a trans - and intra - dermal route of inoculation to challenge calves with bacteria such as salmonella . a multi inoculator ( e . g ., lancet ) allergy skin - testing device is inoculated with a salmonella broth and applied with mild pressure to specific regions of the bovine &# 39 ; s hide that are drained to region - specific lymph nodes . this process may be repeated at the time of initial inoculation or at subsequent days . fig1 shows one embodiment of the vaccination device for use with the present invention in which ( in this example ) 10 inoculation needles are shown . fig2 shows the loading of vaccine into the inoculation needles . fig3 shows a trans / intra dermal challenge site for inoculation to the lymph nodes . fig4 shows the location of the inoculations and the lymph nodes from which the different strains of bacteria were recovered . at various time - points after inoculation , the cattle are sacrificed and target lymph nodes are aseptically harvested and salmonella is recovered and / or detected by culture and isolation or non - culture based detection assays . the method is applicable to many salmonella serotypes and predictably results in salmonella - positive lymph nodes . inoculation of the hind leg results in salmonella recovery from the popliteal lymph node . inoculation of the ventral abdomen results in salmonella recovery from the subiliac lymph node . inoculation of the fore leg results in salmonella recovery from the prescapular lymph node . the present inventors recognized that non - mesenteric lymph nodes in cattle may be a significant source of , e . g ., salmonella , listeria , e . coli , yersinia , campylobacter , shigella , francisella , clostridum , staphylococcus , streptococcus , or bacillus contaminating ground beef . the objective of this work was to determine whether , e . g ., a commercially - available salmonella vaccine protects calves from lymph node colonization following significant oral challenge with two strains of salmonella frequently isolated from dairy cattle , salmonella newport and montevideo . briefly , thirty - two holstein calves were purchased from a calf ranch in the panhandle of texas and transported to a laboratory in college station , tex . one week following arrival ( d 0 ), all calves were randomly assigned to treatment ( control or vaccine ; n = 16 hd / treatment ). vaccinate calves were administered a commercially - available salmonella newport srp vaccine ( 2 ml s . c .) while control calves received a sham - injection of corn oil ( 2 ml s . c .). a second booster vaccination and sham - injections were administered on d 21 . body weights were recorded weekly throughout the study period and rectal swabs collected at time of weighing on d 0 , 7 , 14 , 21 and 28 . on d 33 , calves were assigned to pen ( 8 pens , 4 calves per pen ) and inoculated salmonella strain ( montevideo or newport ; 4 pens / strain ). on d 35 , all calves were inoculated with either salmonella montevideo or newport resulting in four treatments : control — newport ; control — montevideo ; vaccine — newport ; vaccine — montevideo ; eight calves and two pens per treatment . on d 49 ( 14 d post - inoculation ) one - half of the calves ( group 1 ) in each pen ( and treatment ) were euthanized and necropsied . the following lymph nodes were collected and cultured for the challenge strains of salmonella : subiliac ( left and right ), popliteal ( left and right ), retropharangeal , superficial cervical ( left and right ), and mesenteric ( ileo - cecal ). on d 56 ( 21 d post - inoculation ), all remaining calves ( group 2 ) were euthanized and necropsied . all lymph nodes were quantitatively and qualitatively cultured for the challenge strains of salmonella . very few lymph nodes contained quantifiable populations . the percentages of salmonella - positive lymph nodes following enrichment were much higher , although at 14 d post - inoculation ( group 1 ), no significant treatment differences were observed in the percentage of lymph nodes positive for salmonella montevideo or newport . however at 21 d post - inoculation , there were fewer ( p & lt ; 0 . 05 ) right popliteal ( 0 versus 75 %) and right pre - scapular nodes ( 0 versus 75 %) that were salmonella positive in the vaccine — newport compared to control — newport treatments . the percentage of left popliteal and left pre - scapular nodes likewise tended ( p = 0 . 10 ) to decrease in the vaccine - newport treatment compared to non - vaccinated controls , while more ileo - cecal lymph nodes tended ( p = 0 . 10 ) to be positive in the vaccine - newport treatment . salmonella - positive mandibular nodes tended ( p = 0 . 10 ) to increase in the vaccine — montevideo treatment compared to control — montevideo calves . all fecal swabs , collected weekly for five weeks prior to salmonella infection , were culture negative . post - inoculation fecal samples were not affected by treatment ( p & gt ; 0 . 05 ) for either strain , although in group 2 there was a tendency ( p = 0 . 09 ) for the control - newport calves to shed lower concentrations of salmonella compared to the vaccine - newport animals . initial and final body weights and overall body weight change were not different ( p & gt ; 0 . 05 ) due to treatment . while no treatment effects were observed in the group 1 calves , the data from group 2 suggests that the vaccine may have been more effective with additional time between initial infection and necropsy and / or a lower challenge dose of salmonella . a second study was conducted identical to the above study with the exception that the challenge dose of salmonella was lower ( 10 7 vs 10 8 ) and the time frame between challenge and necropsy extended . lymph nodes collected on 14 and 28 d post - challenge ( 16 steers ) were all culture negative , therefore the study was terminated and future oral challenge models will employ a higher challenge dose and / or multiple challenges . a third pilot study was recently initiated to determine if intra - dermal application of salmonella is capable of infecting non - mesenteric lymph nodes . early results were positive and the potential model is currently under further investigation . fig4 shows the location of the inoculations and the lymph nodes from which the different strains of bacteria were recovered . recent investigations have found that salmonella can be routinely recovered from peripheral lymph nodes ( plns ) of cattle presented for harvest . when contained within the plns , this foodborne pathogen is protected from currently used postharvest , in - plant intervention strategies and , therefore , plns harboring salmonella may be a potential contaminant of ground beef . the objective of this work was to develop a challenge model that effectively and repeatedly results in salmonella - positive plns . a 10 - lancet skin - allergy instrument was inoculated with salmonella , and calves were inoculated intra - and / or transdermally by applying the device over various ventral regions of the skin . salmonella was successfully and predictably recovered from region - specific plns up to 8 days postchallenge . furthermore , serotypes inoculated within specific regions were only recovered from the plns draining those regions . this model provides a method to predictably infect plns with salmonella . further , this model makes it possible to determine the duration of infection and to evaluate candidate interventions that may shorten the duration of infection . recent reports indicate that it is not uncommon to recover salmonella from the peripheral lymph nodes ( plns ) of cattle presented for harvest ( 1 , 6 ); moreover , others have implicated salmonella - positive plns as a likely source of salmonella in ground beef ( 7 ). because salmonella is a gastrointestinal pathogen ( 2 - 4 ), it seems logical that pln infection by salmonella occurs via systemic spread from the gastrointestinal tract . this hypothesized route has been supported by studies in which salmonella was isolated from the mesenteric lymph nodes of healthy cattle at slaughter ( 10 ) and systemic translocation of salmonella from the small intestine was found to occur via the lymphatic system ( 8 , 9 ). however , recent attempts in the inventors &# 39 ; laboratory to develop a model of salmonella infection of the plns using an oral challenge ( 5 ) have produced inconsistent and , therefore , unpredictable results . it is possible that salmonella may infect plns , whereby salmonella crosses the host &# 39 ; s integument transdermally . this may occur as a consequence of abrasions , diseases of the integument , or other means such as biting flies , whereby salmonella is introduced intradermally or transdermally and then transported from the interstitial spaces to the regional draining plns . the present invention includes a model in which salmonella is challenged either intradermally or transdermally may provide a more consistent infection of plns . the objective of this study was to develop and evaluate the intra - and transdermal routes of inoculation as potential models of pln infection with salmonella . materials and methods . care , use , and handling of experimental animals were preapproved by the animal care and use committee of the food and feed safety research laboratory , u . s . department of agriculture . because of the unknowns associated with a transdermal route of inoculation and because these studies are necessarily terminal in nature , a series of studies were developed to provide proof of principle and subsequent model development while limiting the number of animals involved . all steers were individually penned in covered , concrete floored pens with feed ( hay and grain ) and ad libitum water to meet the animal &# 39 ; s nutritional requirements . study i . of five holstein steers ( approximate body weight 635 kg ), three were inoculated with salmonella and two were controls . animals were restrained in a squeeze chute , and each leg was immobilized . salmonella inocula were injected intradermally above the metacarpus and metatarsus using a 1 . 0 - ml tuberculin syringe fitted with a 22 - gauge , 1 . 5 - in . needle . tryptic soy broth ( tsb , 1 ml ) containing the salmonella ( 10 8 cfu salmonella per ml ) or corn oil ( control ) was administered in a series of five injections ( 0 . 2 ml per injection site ) in each of the four legs . four serovars were used : pansusceptible salmonella montevideo was inoculated in the right foreleg , multidrug - resistant ( mdr ) salmonella newport in the left foreleg , mdr salmonella typhimurium in the right rear leg , and pansusceptible salmonella senftenberg in the left rear leg . steers were necropsied 2 , 3 , and 4 days following treatment administration ( one treated steer on day 2 ; one control and one treated steer on each of days 3 and 4 ). steers were euthanized ( euthasol , delmarva laboratories , inc ., midlothian , va . ), and the right and left subiliacs , popliteal , and superficial cervical nodes were collected , weighed , and cultured for the challenge strains of salmonella . study ii . one holstein steer ( approximate body weight 150 kg ) was utilized to evaluate an alternative method for intradermal inoculation of salmonella . a 10 - microlancet , skin allergy testing instrument ( comforten multiple skin test device , hollister - stier allergy , spokane , wash .) was dip inoculated with mdr salmonella typhimurium ( tsb with 4 . 5 | 10 8 / ml salmonella ) or pansusceptible salmonella senftenberg ( tsb with 3 . 8 | 10 8 / ml salmonella ). the instrument is designed to penetrate intradermally , not subcutaneously . the inoculated instrument was applied with light pressure both medially and laterally ( twice each ) above the metacarpus and metatarsus of the steer ; salmonella typhimurium was inoculated in the right legs and salmonella senftenberg in the left legs . in between applications ( i . e ., four applications per leg ), the 10 - lancet instrument was redipped into the appropriate salmonella broth , and a new instrument was used for each leg . two days following salmonella challenge , the steer was euthanized and necropsied as above and salmonella was cultured . study iii . two holstein steers ( approximate body weight 180 kg ) were used to further examine the suitability of the 10 - lancet inoculation instrument . each steer was challenged with mdr salmonella newport ( instrument was dip inoculated into tsb with 1 . 9 to 3 . 7 | 10 8 salmonella per ml ) administered to each leg ( five instrument applications per leg ; one anterior and two each on medial and lateral sides of metacarpus and metatarsus ). each leg was inoculated at different times , with the right fore , right rear , left fore , and left rear legs inoculated 2 , 4 , 6 , and 8 days prior to necropsy , respectively . steers were euthanized and lymph nodes harvested as described above . lymph node processing and bacterial culture . lymph nodes were transferred to the laboratory within 30 min of collection and processed as described previously ( 1 ). tetrathionate broth ( 20 ml ) was added to each sample bag containing the processed lymph node and was mixed for 60 s . for quantitative estimation , 1 ml of the pulverized lymph node - tetrathionate broth mixture was removed and 50 ml was direct plated on xylose lysine deoxycholate agar using a commercially available spiral plater ( spiral biotech autoplate 4000 , advanced instruments , inc ., norwood , mass .). plates were incubated ( 37 ° c ., 24 h ), followed by an additional 24 h at room temperature . black colonies were counted and converted to log cfu per gram lymph node tissue . following spiral plating , an additional 80 ml of tetrathionate broth was added and the lymph node - tetrathionate mixture was incubated overnight ( 37 ° c .). then 100 ml of the enrichment was transferred to 5 ml of rappaport - vassiliadis broth and incubated at 42 ° c . for 24 h , prior to plating on brilliant green agar supplemented with novobiocin ( 25 mg / ml ). plates were incubated ( 37 ° c ., overnight ), and presumptive salmonella isolates were serogrouped ( five isolates per positive sample ) using slide agglutination with salmonella antiserum ( difco laboratories , detroit , mich .). results . the intradermal route of inoculation described herein predictably resulted in salmonella - positive plns . in the first study , the majority of plns examined in the three salmonella - treated steers were culture positive for the specific challenge strains , and most contained significant quantifiable concentrations ( 2 . 9 to 5 . 3 log cfu / g lymph node tissue ; table 1 ). the exceptions were that all subiliac lymph nodes were culture negative . furthermore , the route of inoculation provided excellent serotype - region specificity ; the inventors only recovered the serotype ( represented by distinct serogroups ) from the plns that drain the region of inoculation . we did not recover any salmonella from the plns of the two control steers . mild to moderate swelling and lameness were observed in the steers inoculated with salmonella but not in the controls . although every effort was made to administer the salmonella intradermally , controlling the depth of the injection using the tuberculin syringe was difficult . because of the challenge using the syringe and lameness issues , the inventors then used the 10 - microlancet instrument . no swelling or lameness was observed following the use of this instrument ; furthermore , it required minimal animal restraint and improved the ease of application . use of this instrument in the second proof of principle study resulted in recovery of salmonella from both the left popliteal and left superficial cervical plns , whereas those of the right legs and the subiliac nodes were culture negative ( data not shown ). in contrast to the first study , however , the concentration of salmonella within the plns was below the limit of quantification . isolates cultured from the lymph nodes of the left leg all belonged to serogroup b , the same serogroup administered to the left legs . results from the third proof of principle study were similar to the second . in one steer , salmonella was recovered from both right and left superficial cervical and popliteal plns ; in the other steer , salmonella was only recovered from the left superficial cervical plns ( table 2 ). none of the plns contained quantifiable salmonella populations . all lymph node isolates belonged to serogroup c2 , the same serogroup used to inoculate all legs in both animals . salmonella was recovered from the lymph nodes at 2 , 4 , 6 , and 8 days postinoculation . all subiliac lymph nodes were culture negative . the present inventors describe the development of a challenge model that predictably results in salmonella - positive plns . the intradermal route of inoculation is novel and somewhat unconventional , but the inventors believe it is an appropriate approach to determine that a proportion of the salmonella observed in plns of cattle presented for harvest in the united states crosses the integument transdermally . this model provides distinct advantages over other routes of infection used , such as oral or intravenous . first , this route of inoculation predictably results in salmonella - positive plns for at least 8 days postinoculation . with this approach , an estimate of the duration of infection can be made , and the impact of interventions , such as a vaccine , on the duration of infection can be evaluated . duration of infection is an important biological attribute because prevalence , e . g ., prevalence of salmonella - positive plns in cattle presented for harvest , is a function of incidence and duration of infection . incidence , rate of new pln infections per unit time , is difficult to measure directly in real - world settings , but it can be estimated if the duration of infection is known . a further advantage is that this model allows examination of the effect of an intervention against multiple serotypes within an individual animal and the individual can serve as its own control , given the regional specificity of inoculation and recovery . this salient observation will reduce the number of animals required in future challenge models . the 10 - microlancet instrument is that a single - day inoculation resulted in concentrations of salmonella within plns that were below the limit of quantification , yet this approach did not result in lameness or swelling and was well tolerated by the animals . on the other hand , the syringe application provided predictably quantifiable concentrations of salmonella in the regional plns , but unfortunately , this method of inoculation ( and the amount of inoculum ) resulted in overt lameness and swelling and was difficult to administer . a further limitation of the approaches described herein is that none of the subiliac plns were positive for salmonella following inoculation . this may be viewed as an important shortcoming since most of the work demonstrating recovery of salmonella from plns of cattle presented for harvest has used the subiliac plns . in a companion paper ( 5 ), however , the inventors describe the use of a 10 - microlancet instrument to inoculate salmonella intradermally over the ventral abdomen region , resulting in predictably positive subiliac plns . the studies described demonstrate the use of the present invention despite the number of animals in each study . animals of different sizes were used . despite the number of animals and the various sizes , the intradermal route of inoculation proved to be predictable and a suitable challenge model to result in salmonella - positive plns . however , the excellent specificity of the serogroups recovered to those of the regionally inoculated strains suggests that prior exposure is not a high probability . development of challenge models to evaluate the efficacy of a vaccine to reduce carriage of salmonella in peripheral lymph nodes of cattle because challenge models to infect peripheral lymph nodes ( plns ) with salmonella have not been reported , the inventors performed a series of studies to develop and refine challenge models to evaluate an intervention applied at the animal level and to provide initial estimates of efficacy of an intervention ( i . e ., a vaccine ) to aid in the design of future studies . in each of four studies , steers ( control or vaccinated ) were inoculated with salmonella strains montevideo or newport , and in study iv , salmonella senftenberg was also used . calves were euthanized 14 to 42 days postinoculation , and plns were collected . in the first study , calves were challenged with , 10 10 salmonella cells , and few treatment differences were observed 14 days postchallenge . however , by day 21 , salmonella newport was recovered from fewer vaccinated calves than control calves ( p & lt ; 0 . 05 ). in study ii , calves were challenged with , 10 7 salmonella cells and , after two necropsies ( 14 and 28 days postchallenge ), only one lymph node was salmonella positive ; therefore , the study was terminated . in study iii , calves were again challenged with , 10 10 salmonella cells , and no significant effect of vaccine was observed in calves challenged with montevideo or newport strains . a transdermal route of challenge was explored in study iv , using a 10 - lancet , allergy testing instrument . sixteen steers were challenged with either salmonella newport or salmonella montevideo ( salmonella newport right legs ; salmonella montevideo left legs ), and all steers were challenged on the lower abdomen with salmonella senftenberg . transdermal inoculation resulted in predictably salmonella - positive plns , and a modest vaccine effect was detected . because it is well tolerated by the calves and results in predictable and regionally specific salmonella recovery from plns , the transdermal route of challenge may be preferred by researchers wishing to evaluate the impact of interventions designed to reduce the carriage of salmonella in plns . recent research suggests that salmonella may be commonly harbored in peripheral lymph nodes ( plns ) of cattle presented for harvest ( 1 , 7 , 10 ). because plns are frequently included in ground beef , salmonella carriage in plns likely results in some degree of salmonella contamination of ground beef . it may be practical to remove large , easily accessible plns during harvest ; however , it is impractical to remove all plns , as cattle have many small plns throughout their carcasses . it is possible that preharvest control of salmonella may complement within - plant control efforts and reduce the likelihood of ground beef contamination . a vaccine containing siderophore receptors and porin proteins from salmonella newport was associated with reduced shedding of salmonella in the feces of dairy cattle ( 6 , 11 ). in another study ( 9 ) of this vaccine , no difference in fecal salmonella prevalence was observed , although the salmonella prevalence and study design did not lend itself to such a comparison . no differences were observed in fecal shedding of salmonella in studies of feedlot cattle ( 2 ) or dairy cows ( 8 ). it is possible , however , that immunity against salmonella may reduce the duration of infection within lymph nodes regardless of an effect , or lack thereof , within the lumen of the intestine . if so , this vaccine may reduce the prevalence of salmonella within the plns of cattle presented for harvest . because challenge models to infect plns with salmonella have not been reported , the inventors performed a series of four studies to develop and refine challenge models that can be used to evaluate an intervention applied at the animal level and to provide initial estimates of efficacy of an intervention ( i . e ., a vaccine ) that can be used by researchers to aid the design of future studies . materials and methods . care , use , and handling of experimental animals were preapproved by the animal care and use committee of the food and feed safety research laboratory , u . s . department of agriculture . recently weaned holstein and holstein - cross steers were purchased from a single supplier and transported to the laboratory in college station , tex . upon arrival , steers were weighed , identified with an ear tag , and maintained in a large outside lot and fed a commercial nonmedicated calf starter and grass hay . in study i , symptoms of bovine respiratory disease were observed in most steers , and all were administered enrofloxacin ( baytril 100 , bayer animal health llc , shawnee mission , kans .). in subsequent studies , steers were metaphylactically administered tulathromycin ( draxxin , pfizer animal health , new york , n . y .) per manufacturer &# 39 ; s recommendations upon arrival . rectal swabs were collected weekly prechallenge and were cultured for salmonella . following acclimation ( 3 to 5 weeks ), steers were randomly assigned to treatment ( control or vaccine ). vaccinated steers were administered a commercially available salmonella vaccine on days 0 and 21 per label directions ( 2 ml subcutaneous ; salmonella newport bacterial extract vaccine with srp technology , pfizer animal health , madison , n . j . ), whereas control animals received a sham injection of corn oil ( 2 ml subcutaneous ). steers were housed outdoors in covered , concrete floored pens , either two or four steers per pen , and were fed a diet to meet or exceed their nutritional requirements . pens were washed daily . steers were euthanized ( euthasol , delmarva laboratories , midlothian , va . ), and the right and left subiliacs , popliteals , and superficial cervical nodes were collected , weighed , and cultured for the challenge strains of salmonella as described below . study i . thirty - two steers ( average body weight 81 kg ) were inoculated with either salmonella montevideo or salmonella newport in a 2 | 2 factorial design such that there were eight calves per treatment . calves were challenged orally with 20 ml of tryptic soy broth ( tsb ) containing 1 . 0 and 1 . 2 | 10 10 cfu of salmonella montevideo or salmonella newport , respectively . body weights were collected weekly throughout the study period . fourteen days postchallenge , one - half of the calves in each pen ( and treatment ) were euthanized and plns were collected . at 21 days postchallenge , all remaining calves were euthanized and plns were collected . study ii . the design was similar to that of study i , except that the oral challenge included 4 . 2 and 6 . 0 | 107 cfu of salmonella montevideo and salmonella newport , respectively . two calves per treatment were necropsied 14 and 28 days postchallenge . due to the poor recovery of salmonella from the plns , the study was terminated . study iii . using a design similar to that of studies i and ii , calves were challenged with 1 . 5 and 1 . 3 | 10 10 cfu of salmonella montevideo and salmonella newport , respectively , in 20 ml of tsb , and two calves per treatment were necropsied on days 14 , 28 , 35 , and 42 postchallenge . in addition to the nodes described above , axillary lymph nodes ( right and left ) were collected . study iv . sixteen steers ( average body weight 193 kg ; two per pen by treatment ) were randomly allocated to vaccine or control treatment . calves were challenged with either salmonella newport ( 7 . 9 | 10 8 / ml ; eight steers ) or salmonella montevideo ( 1 . 2 | 10 9 / ml ; eight steers ) using a 10 - lancet allergy testing instrument ( comforten multiple skin test device , hollister - stier allergy , spokane , waash .) as described elsewhere ( 5 ). four applications of this 10 - lancet instrument were made to each leg ; two applications were medial and two were lateral to the metacarpus - metatarsus , such that salmonella newport was challenged in the right legs and salmonella montevideo in the left legs . additionally , all calves were challenged on the lower abdomen with salmonella senftenberg ( 4 . 3 | 10 8 / ml ) via two applications each on the right and left sides . a new instrument was used for the different serovars and for each calf . three and 6 days following salmonella challenge , one - half of the calves in each treatment were euthanized and plns were collected . lymph node processing . within 15 min of collection , lymph nodes were transferred to the laboratory and each node was trimmed of excess fat and fascia . trimmed lymph nodes were weighed and then surface sterilized by immersion in boiling water for 3 s . the sterilized lymph node was placed into a filtered stomacher bag , and the tissue was pulverized using a rubber mallet . tetrathionate broth ( 20 ml ) was added to each sample bag , followed by mixing for 60 s with a laboratory blender . for quantitative culture , 1 ml of the pulverized lymph node - tetrathionate broth mixture was removed and 50 ml was direct plated on xylose lysine deoxycholate agar using a commercially available spiral plater ( spiral biotech autoplate 4000 , advanced instruments , inc ., norwood , mass .). plates were incubated ( 37 ° c ., 24 h ) followed by an additional 24 h at room temperature . black colonies were counted and converted to log cfu per gram pln . following spiral plating , an additional 80 ml of tetrathionate broth was added , and the lymph node - tetrathionate mixture was incubated overnight ( 37 ° c .). a sample ( 100 ml ) of this enrichment was transferred to 5 ml of rappaport - vassiliadis broth and incubated at 42 ° c . for 24 h , and then it was plated for isolation on brilliant green agar supplemented with novobiocin ( 25 mg / ml ). plates were incubated at 37 ° c . overnight , and salmonella isolates were serogrouped ( three isolates per pln ). serogrouping was conducted using slide agglutination with salmonella antiserum ( difco , bd , detroit , mich .). rectal swabs were enriched in 20 ml of tetrathionate broth and were incubated at 37 ° c . overnight ; next , 100 ml was inoculated into 5 ml of rappaport - vassiliadis broth , incubated as above , and then plated for isolation on brilliant green agar supplemented with novobiocin and incubated as described . statistical analysis . data were analyzed using sas software ( version 9 . 3 , sas institute inc ., cary , n . c .). contingency tables were developed and within - table dependency was evaluated using either a chi - square statistic or a fisher &# 39 ; s exact test . logistic regression models were constructed to compare treatment effects . results . rectal swabs collected prechallenge were all salmonella negative except for study iii , in which a few swabs were positive and all of the isolates belonged to serogroups different from the challenge strains . in study i , salmonella was recovered from 58 . 3 and 87 . 5 % of plns and calves , respectively . no significant differences were observed in the percentage of plns positive for salmonella montevideo or salmonella newport on day 14 ( table 3 ). at 21 days postinoculation , salmonella newport was recovered from fewer ( p & lt ; 0 . 05 ) plns among the vaccinated calves ( 4 %) compared with the control calves ( 54 %). with two exceptions , all recovered isolate serogroups matched the respective challenge strains . two steers in the montevideo ( serogroup c1 ) treatment ( one each control and vaccine ) also had serogroup c2 isolates cultured from their lymph nodes . a vaccine , administered a commercially available salmonella vaccine ; control , administered a sham injection . values followed by letters a and b indicate that row percentages within necropsy and salmonella strain tend to differ ( p & lt ; 0 . 10 ); values followed by letters c and d indicate that row percentages within necropsy and salmonella strain are different ( p & lt ; 0 . 05 ). in study ii , salmonella was only recovered from two plns harvested during the first two necropsies ( 14 and 28 days postinoculation ); therefore , the study was terminated . the higher challenge dose ( i . e ., 10 10 ) in study iii resulted in the recovery of salmonella from plns . salmonella was recovered from 35 . 2 and 62 . 5 % of plns and calves , respectively . no significant treatment differences were observed , with one exception : the vaccine treatment decreased ( p & lt ; 0 . 05 ) the percentage of salmonella - positive left axillary nodes compared with controls across serotypes . salmonella was recovered from fewer plns of calves challenged with salmonella newport than from those challenged with salmonella montevideo ( table 4 ). the majority of isolates ( 98 %) matched the serogroup of the challenge strain . the only exceptions were that salmonella montevideo was cultured from the popliteal and subiliac in one calf on day 35 and from the subiliac in another calf on day 42 ; both of these calves were inoculated with salmonella newport . in the transdermal challenge model ( study iv ), salmonella was recovered from 58 . 3 and 93 . 8 % of plns and calves , respectively . no treatment differences were observed among calves inoculated with salmonella montevideo , except that there was reduced ( p & lt ; 0 . 05 ) likelihood of recovery from the right subiliac lymph nodes among vaccinates compared with controls ( table 5 ). across all nodes , the likelihood of recovery of salmonella newport from plns was lower ( p = 0 . 03 ) among vaccinated calves ( 33 . 3 %) compared with controls ( 66 . 7 %). all but one isolate matched the serogroup of regional challenge . the only exception was that one isolate from a subiliac lymph node was serogroup c2 ( presumably newport ) instead of e4 ( i . e ., senftenberg ). discussion . in the work described herein , the inventors developed two distinct routes of salmonella challenge that resulted in salmonella recovery from plns . because prevalence of salmonella in plns is a function of incidence ( i . e ., rate of new pln infections ) and duration of infection , the inventors included various windows of harvest to capture a change in the duration of infection , given that the inventors attempted to control the incidence ( i . e ., by providing the challenge at one time point ). in study i , the oral challenge , no evidence of a reduction in prevalence was observed 14 days after challenge . after 21 days , a decrease was observed in calves challenged with salmonella newport , which likely indicated an increased rate of clearance ( or reduced duration of infection ). also , a treatment effect was observed in study iv ( transdermal ), and a numerical reduction was observed in study iii . despite this evidence supporting its efficacy against salmonella newport , no association ( even with a liberal interpretation of p values ) was observed for salmonella montevideo . this may be because there is a lack of antigenic homology between the challenge serotypes or because montevideo has additional mechanisms for iron acquisition , or it may be due to other variations among host - bacteria interactions . a salmonella strains montevideo and newport ( n ~ 16 calves each ) were administered to the lower legs ; salmonella senftenberg ( all calves ) was administered to the ventral abdomen . vaccine , administered a commercially available salmonella vaccine ; control , administered a sham injection . values followed by letters a and b indicate that row percentages within salmonella strain are different ( p & lt ; 0 . 05 ); values followed by letters c and d indicate that row percentages within salmonella strain tend to differ ( p ≦ 0 . 10 ). it is clear from the work described herein that a substantial oral dose ( i . e ., 10 10 ) of salmonella is required to result in recovery of salmonella from plns . in study ii , the lower dose failed to produce salmonella in plns at detectable concentrations . on occasion , the inventors did recover serogroups other than the challenge serogroup . it may be that repeated lower doses would have been equally effective as ( or even more effective than ) a single large challenge . whereas repeated exposures may better mimic real - world events , the inventors attempted to control incidence to the extent possible so that observed differences in vaccine status ( or in serotype status ) were primarily a reflection of changes in duration of infection . once duration of infection is known for specific serotypes , variation in challenge regimens might be explored . the recovery of serogroup c2 in calves challenged with salmonella montevideo ( i . e ., c1 ) ( study i ) and of c1 in calves challenged with salmonella newport ( study iii ) may have resulted from cross - contamination via workers , flies , birds , air movement , or the environment . alternatively , the inventors cannot rule out prior exposure , as these serotypes are frequently isolated from dairy cattle ( 3 , 4 , 12 ). a transdermal route of infection may account for some salmonella recovered from the plns of cattle presented for harvest . the inventors shows a transdermal route of infection as the study iv challenge study . multiple serotypes were used within the sample animal ( i . e ., senftenberg and montevideo or senftenberg and newport ), and this route of challenge predictably resulted in positive plns . moreover , the serogroups recovered from the plns that drain the challenge region ( e . g ., right foreleg to prescapular lymph node versus ventral abdomen to subiliac lymph node ) matched in all but one instance . similar to study i , a vaccine effect was observed for salmonella newport but not for salmonella montevideo . across all necropsy days , the relative magnitude of association between vaccine status and salmonella newport prevalence for studies i , iii , and iv was 20 . 3 , 39 . 4 , and 50 %, respectively . these data , in conjunction with the control prevalence , should inform the design and sample size calculations of future studies . while the ideal window in which to sample plns subsequent to challenge is not completely certain , the time periods described herein provide a reasonable estimate . recent studies have shown that salmonella can routinely be recovered from peripheral lymph nodes of cattle and other animals . when salmonella is harbored within lymph nodes it is protected from current interventions employed in abattoirs . since these lymph nodes are often incorporated into ground meat , they may be a point of contamination within ground product . using lymph nodes as a method to introduce salmonella provides a model system for measuring and treating salmonella distributed throughout ground meat during commercial production . illnesses associated with exposure to foodborne pathogens pose a significant economic burden on the united states each year ( scharff ). of the many known foodborne pathogens , salmonella enterica is estimated to cause over 1 million illnesses annually ( scallan ). it is widely accepted that cattle are associated with salmonella the pathogen can persist on hides or in feces . as such , beef has been recognized as a vehicle for human exposure to salmonella ( bacon ; fedorka - cray ; fegan ; kunze ; loneragan ). despite the use of effective post - harvest pathogen interventions within the abattoir , salmonella is still present in retail ground beef . in a study of commercially produced ground beef , bosilevac , recovered salmonella from 4 . 2 % of retail ground beef samples ( n = 4 , 136 ) collected from seven regions of the united states . salmonella has been recovered from peripheral lymph nodes ( pln ) of cattle at harvest . because lymph nodes containing salmonella are commonly present in lean and fat trimmings that are incorporated into ground beef , pln are a likely a significant source of salmonella contamination . however , the majority of studies have only examined a select few nodes ( e . g . subiliac and mesenteric lymph nodes ) leaving a critical knowledge gap ( arthur ; brichta - harhay ; gragg 2013a ; gragg 2013b ; haneklaus ). the present inventors describe the prevalence and concentration of salmonella in small pln of cattle harvested in high - and medium - prevalence regions of the us , and evaluate and characterize the distribution of salmonella in ground beef when the contamination arises from pln . small pln sample collection . a total of 1 , 270 pln were collected from six anatomically distinct areas of the carcass ( i . e . chuck plate fat side , chuck plate bone side , shoulder clod , loin , tenderloin , and popliteal ) during fabrication from two separate commercial slaughter facilities ( approximately 100 per each pln type ). additionally , 50 subiliac lymph nodes were collected from each facility to facilitate some comparison of salmonella prevalence estimates to historical data . peripheral lymph nodes were not collected from the same carcass . lymph nodes were placed in coolers with ice packs during transportation . lymph node samples were analyzed for the presence of salmonella as previously described by brichta - harhay . briefly , each node was aseptically trimmed from its surrounding adipose tissue and submerged in boiling water for 3 to 5 seconds for surface sterilization . surface - sterilized lymph nodes were immediately placed in a sterile whirl - pack bag and weighed . lymph nodes were then pulverized with a rubber mallet and enriched with 40 ml of tryptic soy broth ( emd millipore , billerica , mass .). culture and quantification procedures proceeded as described below and previously by brichta - harhay . grinding study processing . peripheral lymph nodes were collected from steers challenged with salmonella via transdermal inoculation as described by edrington . six pln ( i . e ., pre - scapular , subiliac and popliteal lymph nodes collected from either side of the animal ) were thoroughly mixed into 10 kilograms of 85 / 15 beef trim and ground using a ⅜ - inch grinder plate to simulate a coarse grind . the ground product passed through a loafing attachment ( colosimo &# 39 ; s original , magna , utah ) and onto wax paper . the continuous ground beef loaf was portioned into approximately 100 - gram samples and kept in chronological order . the residual ground beef left between the loafing attachment and the grinder plate , as well as , what was left in the auger was also collected and processed . ground beef samples were individually placed into filtered sample bags and enriched with 400 ml of tsb . culture and quantification procedures followed previously described methods brichta - harhay et al ., ( 2012 ). in a second study , pln were collected from steers challenged with salmonella via transdermal inoculation as described by edrington et al ., ( 2013 ). one pln was ground with 10 kilograms of 85 / 15 beef trim and ground using a ⅜ - inch grinder plate to simulate a coarse grind . first , 1 kg of trim was weighed and this was ground first . then the lymph node and remaining 9 kg of trim were ground . the ground product passed through a loafing attachment and onto wax paper . the continuous ground beef loaf was portioned into approximately 100 - gram samples and kept in chronological order . the residual ground beef left between the colosimo attachment and the grinder plate , as well as , what was left in the auger was also collected and processed . ground beef samples were individually placed into filtered sample bags and enriched with 400 ml of tsb and subjected to previously described culture and quantification procedures brichta - harhay et al ., ( 2012 ). for all studies , pln and ground beef ( gb ) enrichments were plated onto dehydrated enterobacteriaceae petrifilms in duplicate ( pln ) or quadruplicate ( gb ) to determine the concentration of salmonella present in each sample . for salmonella confirmation , the incubated media films were pressed onto xylose lysine deoxycholate agar ( becton , dickson , and co ., sparks , md .) and incubated at 37 ° c . for approximately 16 hours . colonies displaying typical salmonella morphology types were counted and reported as cfu / pln or cfu / 100 g gb , and cfu / gram of pln or gb . peripheral lymph node and gb enrichments were incubated at 25 ° c . for 2 hours and then 42 ° c . for 12 hours . immunomagnetic separation was performed on incubated sample enrichments using anti - salmonella dynabeads ® ( invitrogen , carlsbad , calif .). recovered beads ( approximately 100 μl ) were placed into 3 ml of rappaport - vassiliadis broth ( neogen , lansing , mich .) for secondary enrichment and incubated at 42 ° c . for 18 - 20 hours and then streaked to xld and brilliant green sulfa agar ( bgs ). typical colonies on xld ( black center ) and bgs ( bright pink ) indicated salmonella - positive samples . for the small pln study , the average weight of individual pln collected was 0 . 5 , 2 . 5 , 4 . 1 , 12 . 7 , 13 . 6 , and 14 . 4 grams among the shoulder clod , chuck plate , loin , tenderloin , subiliac , and popliteal lymph nodes , respectively . in all pln samples collected from both facilities , salmonella was recovered from 0 , 3 . 9 , 0 . 5 , 0 . 5 , 1 , 3 . 5 , 12 . 5 and 26 % of chuck plate fat side ( plant 1 only ), chuck plate bone side ( plant 1 only ), chuck ( plant 2 only ), shoulder clod , loin , tenderloin , subiliac and popliteal lymph nodes , respectively . the prevalence of salmonella observed in subiliac lymph nodes ( i . e . facility 1 - 13 % and facility 2 - 12 %) was similar to the reported findings of gragg 2013a for fed cattle . of the total pln positive for salmonella from both plants , 46 % contained quantifiable levels . for positive pln , salmonella was found at 2 . 2 , 1 , 1 . 4 , 0 . 9 , and 3 . 2 log 10 cfu / pln among chuck plate bone side ( plant 1 only ), chuck plate ( plant 2 only ), tenderloin , subiliac , and popliteal lymph nodes , respectively . the distribution of qualitative and quantitative salmonella recovery from course gb is presented in fig5 . the chart labeled rep 1 preliminary was the first run through of the protocol . this rep was performed using 15 kg of trim and was an exploratory effort to fine - tune the model . another difference in this rep was that the lymph nodes were trimmed of all adipose tissue prior to grinding . for the remainder of the studies , 10 kg was used and the adipose tissue surrounding the lymph node was left to better reflect how lymph nodes are incorporated into trim for ground beef production . because there were only two samples in the first ( preliminary ) rep that were quantifiable , the amount of trim used was reduced from 15 kg to 10 kg in order to try to increase the number of quantifiable samples . the six reps of the initial grinding study ( labeled rep 2 - 7 ) yielded very different results . the charts show the distribution of positive samples . the percentage of salmonella positive samples in reps 2 - 7 were 87 . 4 %, 56 . 7 %, 50 . 9 %, 28 . 4 %, 68 . 6 %, and 49 . 5 %, respectively . enumeration analysis of each sample resulted in a mean concentration of 2 . 28 logio cfu per 100 - g ground beef sample ( gb ) among quantifiable nodes . in reps 1 - 6 of the single node grinding study , the percentage of positive samples were 3 . 9 %, 15 . 7 %, 6 . 0 %, 13 . 7 %, 19 . 8 %, and 8 . 8 % respectively . there were no samples in the single node study that were enumerable . as part of the single node study ten lymph nodes were cultured to determine concentration of salmonella . these lymph nodes were the remaining lymph nodes from each animal that weren &# 39 ; t used in the grinding process . each lymph node was divided into thirds in an effort to determine if the concentration is the same throughout the lymph node and provide insights into the salmonella replication within pln . salmonella was not recovered from 3 of the lymph nodes , i . e ., two popliteal from one animal and another popliteal from a different animal . the concentration of each part of the node varied to a limited degree , and not all parts of the each node were above the limit of quantification . the concentrations of each part as well as the whole lymph node are in presented in tables 6a and 6b . fig6 shows how the lymph node was divided into thirds . fig7 shows the distribution of salmonella concentration in ground beef samples . recent work on salmonella within pln of cattle has focused on establishing baseline prevalence data for a select few nodes ( arthur ; brichta - harhay ; gragg ; haneklaus ). data from the present pln study provides new and important findings on the burden of salmonella in small pln that are routinely exposed during carcass fabrication . in this study , the inventors observed that salmonella can be present within multiple small pln of cattle , suggesting that salmonella may be dispersed throughout the lymphatic system of infected cattle . in addition , collection of the subiliac and popliteal pln provided a reasonable comparison to prior studies . the data described herein indicate that the burden of salmonella in small pln found widely throughout beef carcasses is low relative to that of large pln ( i . e ., prescapular , subiliac and popliteal nodes ). these data ought to inform risk assessment models and our understanding of the risk associated with small pln , which appears to be low . the improved understanding of the distribution of salmonella within lymphatic tissue of harvest - ready cattle can inform beef processors of the risk associated with pln during carcass fabrication . the data provided herein lead to a better understanding of the distribution — both qualitative and quantitative — of salmonella in course ground product when the contamination arises from pln . the distribution is highly clustered and clearly associated with entry of a pln into the grind then once that tissue is pushed through the plate , salmonella was no longer ( or extremely rarely ) recovered from the product . while these data provide valuable information for risk assessment efforts , they are somewhat limited in that a ) the concentration of salmonella in gb was relatively low in that in most instances it was not quantifiable and b ) course ground beef is typically reground into a fine - ground product . because lymph nodes are often encased in fat , current interventions do not have an effect on salmonella present within the lymph node . inclusion of salmonella - positive lymph nodes into ground beef leads to the development of practical interventions to reduce salmonella contamination in trim and ground beef , including , apply an intervention prior to regrinding of course ground beef in to fine ground beef . it is contemplated that any embodiment discussed in this specification can be implemented with respect to any method , kit , reagent , or composition of the invention , and vice versa . furthermore , compositions of the invention can be used to achieve methods of the invention . it will be understood that particular embodiments described herein are shown by way of illustration and not as limitations of the invention . the principal features of this invention can be employed in various embodiments without departing from the scope of the invention . those skilled in the art will recognize , or be able to ascertain using no more than routine experimentation , numerous equivalents to the specific procedures described herein . such equivalents are considered to be within the scope of this invention and are covered by the claims . all publications and patent applications mentioned in the specification are indicative of the level of skill of those skilled in the art to which this invention pertains . all publications and patent applications are herein incorporated by reference to the same extent as if each individual publication or patent application was specifically and individually indicated to be incorporated by reference . the use of the word “ a ” or “ an ” when used in conjunction with the term “ comprising ” in the claims and / or the specification may mean “ one ,” but it is also consistent with the meaning of “ one or more ,” “ at least one ,” and “ one or more than one .” the use of the term “ or ” in the claims is used to mean “ and / or ” unless explicitly indicated to refer to alternatives only or the alternatives are mutually exclusive , although the disclosure supports a definition that refers to only alternatives and “ and / or .” throughout this application , the term “ about ” is used to indicate that a value includes the inherent variation of error for the device , the method being employed to determine the value , or the variation that exists among the study subjects . as used in this specification and claim ( s ), the words “ comprising ” ( and any form of comprising , such as “ comprise ” and “ comprises ”), “ having ” ( and any form of having , such as “ have ” and “ has ”), “ including ” ( and any form of including , such as “ includes ” and “ include ”) or “ containing ” ( and any form of containing , such as “ contains ” and “ contain ”) are inclusive or open - ended and do not exclude additional , unrecited elements or method steps . the term “ or combinations thereof ” as used herein refers to all permutations and combinations of the listed items preceding the term . for example , “ a , b , c , or combinations thereof ” is intended to include at least one of : a , b , c , ab , ac , bc , or abc , and if order is important in a particular context , also ba , ca , cb , cba , bca , acb , bac , or cab . continuing with this example , expressly included are combinations that contain repeats of one or more item or term , such as bb , aaa , ab , bbc , aaabcccc , cbbaaa , cababb , and so forth . the skilled artisan will understand that typically there is no limit on the number of items or terms in any combination , unless otherwise apparent from the context . in certain embodiments , the present invention may also include methods and compositions in which the transition phrase “ consisting essentially of ” or “ consisting of ” may also be used . as used herein , words of approximation such as , without limitation , “ about ”, “ substantial ” or “ substantially ” refers to a condition that when so modified is understood to not necessarily be absolute or perfect but would be considered close enough to those of ordinary skill in the art to warrant designating the condition as being present . the extent to which the description may vary will depend on how great a change can be instituted and still have one of ordinary skilled in the art recognize the modified feature as still having the required characteristics and capabilities of the unmodified feature . in general , but subject to the preceding discussion , a numerical value herein that is modified by a word of approximation such as “ about ” may vary from the stated value by at least ± 1 , 2 , 3 , 4 , 5 , 6 , 7 , 10 , 12 or 15 %. all of the compositions and / or methods disclosed and claimed herein can be made and executed without undue experimentation in light of the present disclosure . while the compositions and methods of this invention have been described in terms of preferred embodiments , it will be apparent to those of skill in the art that variations may be applied to the compositions and / or methods and in the steps or in the sequence of steps of the method described herein without departing from the concept , spirit and scope of the invention . all such similar substitutes and modifications apparent to those skilled in the art are deemed to be within the spirit , scope and concept of the invention as defined by the appended claims . 1 . arthur , t . m ., d . m . brichta - 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