PATENT CLAIM ANALYSIS

Application Number: 15997654
Application Type: Utility
Filing Date: 2018-06
Publication Date: 2018-10
Patent Classification: ["702", "019000"]

Abstract:
Embodiments of a method and/or system for characterizing one or more sleep-related conditions can include determining a microorganism dataset associated with a set of subjects; and/or performing a characterization process associated with the one or more sleep-related conditions, based on the microorganism dataset, where performing the characterization process can additionally or alternatively include performing a sleep-related characterization process for the one or more sleep-related conditions, and/or determining one or more therapies S 140.

Claim (Index 25):
The method of  claim 12 , wherein the first sleep-related condition comprises a bad sleep quality condition, wherein determining user microbiome features comprises determining the user microbiome composition features comprising a set of composition features associated with a skin site and with at least one of:  Abiotrophia defectiva, Achromobacter xylosoxidans, Acinetobacter baumannii, Acinetobacter radioresistens, Acinetobacter  sp. 423D,  Acinetobacter  sp. C-S-NA3 , Acinetobacter  sp. C-S-PDA7 , Acinetobacter  sp. HD5.2 , Acinetobacter  sp. RBE2CD-114 , Acinetobacter  sp. RBE2CD-76 , Acinetobacter  sp. S2(2009),  Acinetobacter  sp. T133 , Acinetobacter ursingii, Actinobacillus porcinus, Actinomyces dentalis, Actinomyces georgiae, Actinomyces gerencseriae, Actinomyces graevenitzii, Actinomyces massiliensis, Actinomyces odontolyticus, Actinomyces radingae, Actinomyces  sp. ICM41 , Actinomyces  sp. ICM54 , Actinomyces  sp. S4-C9 , Actinomyces  sp. canine oral taxon 374 , Actinomyces  sp. oral taxon 175 , Actinomyces  sp. ph3 , Actinoplanes auranticolor, Aeromonas salmonicida, Aeromonas  sp. B11 , Aerosphaera taetra, Aggregatibacter aphrophilus, Aggregatibacter segnis, Akkermansia muciniphila, Albidovulum inexpectatum, Alistipes finegoldii, Alistipes shahii, Alistipes  sp. EBA6-25c12 , Alistipes  sp. NML05A004 , Alkanindiges illinoisensis, Alloiococcus otitis, Alloprevotella rava, Anaerobacillus alkalidiazotrophicus, Anaerococcus hydrogenalis, Anaerococcus lactolyticus, Anaerococcus murdochii, Anaerococcus octavius, Anaerococcus prevotii, Anaerococcus provencensis, Anaerococcus  sp. 8405254 , Anaerococcus  sp. 9401487 , Anaerococcus  sp. S8 F2 , Anaerococcus tetradius, Anaerococcus vaginalis, Anaerostipes hadrus, Anoxybacillus  sp. HT14 , Aquabacterium  sp. Aqua2 , Aquamicrobium lusatiense, Aquaspirillum  sp. canine oral taxon 091 , Arthrobacter  sp. LM27(2011),  Arthrobacter  sp. NIO-1057 , Atopobium  sp. S3MV24 , Aureimonas phyllosphaerae, Bacillus cereus, Bacillus flexus, Bacillus pocheonensis, Bacillus pseudofirmus, Bacillus safensis, Bacillus  sp. CBMAI 1158 , Bacillus  sp. T41 , Bacteroides caccae, Bacteroides clarus, Bacteroides coprocola, Bacteroides eggerthii, Bacteroides finegoldii, Bacteroides fragilis, Bacteroides massiliensis, Bacteroides nordii, Bacteroides ovatus, Bacteroides plebeius, Bacteroides  sp. 2_2_4 , Bacteroides  sp. 35AE37 , Bacteroides  sp. AR20 , Bacteroides  sp. D22 , Bacteroides  sp. DJF_B097 , Bacteroides  sp. EBA5-17 , Bacteroides  sp. J1511 , Bacteroides  sp. XB12B,  Bacteroides  sp. XB44A,  Bacteroides  sp. canine oral taxon 040 , Bacteroides stercoris, Bacteroides thetaiotaomicron, Bacteroides uniformis, Bacteroides vulgatus, Barnesiella intestinihominis, Bergeyella  sp. h1971d,  Bibersteinia trehalosi, Bifidobacterium animalis, Bifidobacterium longum, Bilophila  sp. 4_130 , Blastococcus  sp. FXJ6.383 , Blautia faecis, Blautia luti, Blautia  sp. YHC-4 , Blautia stercoris, Blautia wexlerae, Bosea  sp. B0.09-49 , Bosea  sp. BIWAKO-01 , Bosea  sp. R-46060 , Brachybacterium faecium, Brachybacterium  sp. NIO-27 , Bradyrhizobium  sp. CCBAU 53380 , Brevibacterium pityocampae, Brevibacterium  sp. A9C6 , Brevibacterium  sp. MBTD_CMFRI_Bro2 , Brevundimonas diminuta, Brevundimonas  sp. JW23.4a,  Brevundimonas  sp. V3M6 , Brevundimonas  sp. ao0l-4 , Brevundimonas subvibrioides, Brochothrix  sp. MVP25 , Burkholderia  sp. S32 , Butyricimonas virosa, Campylobacter gracilis, Campylobacter ureolyticus, Capnocytophaga canimorsus, Capnocytophaga  genosp. AHN8471 , Capnocytophaga gingivalis, Capnocytophaga granulosa, Capnocytophaga ochracea, Capnocytophaga  sp. oral taxon 338 , Catonella morbi, Caulobacter  sp.,  Cellulomonas denverensis, Cellulosimicrobium cellulans, Cellulosimicrobium  sp. 143-1 , Centipeda periodontii, Chryseobacterium haifense, Chryseobacterium  sp. MCio-6 , Chryseobacterium  sp. R31,  Chryseobacterium  sp. Y1D,  Chryseobacterium  sp. bk_9 , Chryseobacterium  sp. sptzw36 , Chryseomicrobium imtechense, Citrobacter  sp. BW4 , Cloacibacterium rupense, Clostridioides difficile, Collinsella aerofaciens, Collinsella intestinalis, Comamonas jiangduensis, Comamonas  sp. HM_AF10 , Comamonas  sp. RV_F08_22d,  Conchiformibius steedae, Corynebacterium argentoratense, Corynebacterium atypicum, Corynebacterium canis, Corynebacterium capitovis, Corynebacterium ciconiae, Corynebacterium diphtheriae, Corynebacterium durum, Corynebacterium epidermidicanis, Corynebacterium freiburgense, Corynebacterium glucuronolyticum, Corynebacterium mastitidis, Corynebacterium  sp. 713182/2012 , Corynebacterium  sp. NML 97-0186 , Corynebacterium  sp. jw37 , Corynebacterium spheniscorum, Corynebacterium ulcerans, Curvibacter gracilis, Cutibacterium acnes, Cutibacterium avidum, Cutibacterium granulosum, Deinococcus antarcticus, Deinococcus  sp. MN4-8 , Delftia lacustris, Delftia  sp. BN-SKY3 , Dermabacter hominis, Dermacoccus nishinomiyaensis, Dermacoccus  sp. Ellin185 , Dermacoccus  sp. SST-20 , Desulfovibrio piger, Dialister invisus, Dialister micraerophilus, Dialister propionicifaciens, Dialister  sp. S7MS R5 , Dialister succinatiphilus, Dietzia cinnamea, Dietzia lutea, Dietzia  sp. ISA13 , Dolosigranulum pigrum, Duganella  sp. SB,  Eisenbergiella tayi, Elizabethkingia meningoseptica, Empedobacter falsenii, Enterobacter cloacae, Enterococcus  sp. C6I11 , Enterococcus  sp. SI-4 , Erythrobacter  sp. DHXJ15 , Exiguobacterium  sp. IT2 , Exiguobacterium  sp. Sh3 , Exiguobacterium  sp. YS1 , Exiguobacterium  sp. icr3 , Facklamia languida, Faecalibacterium prausnitzii, Filifactor villosus, Finegoldia magna, Finegoldia  sp. BV3C29 , Finegoldia  sp. S8 F7 , Finegoldia  sp. S9 AA1-5 , Flavobacterium ceti, Flavobacterium  sp. CS43 , Flavonifractor plautii, Friedmanniella  sp. Ellin171 , Friedmanniella spumicola, Frigoribacterium  sp. PDD-31b-8 , Fusicatenibacter saccharivorans, Fusobacterium nucleatum, Fusobacterium periodonticum, Gardnerella vaginalis, Gemella morbillorum, Gemella  sp. 933-88 , Geobacillus stearothermophilus, Gordonia sputi, Gordonia terrae, Gordonibacter pamelaeae, Granulicatella adiacens, Granulicatella elegans, Haematobacter massiliensis, Haemophilus parainfluenzae, Halomonas pacifica, Herbaspirillum huttiense, Herbaspirillum seropedicae, Hymenobacter  sp. MIC2056 , Janibacter  sp. IARI-RP17 , Jeotgalicoccus aerolatus, Jeotgalicoccus nanhaiensis, Jeotgalicoccus  sp. AD9 , Kingella oralis, Klebsiella pneumoniae, Klebsiella  sp. B12 , Kluyvera georgiana, Knoellia  sp. BA3(2011),  Knoellia  sp. Zs20 , Kocuria kristinae, Kocuria rhizophila, Kocuria  sp. FXJ6.339 , Kytococcus  sp. YB227 , Lachnoanaerobaculum saburreum, Lachnoanaerobaculum  sp. OBRC5-5 , Lachnospira pectinoschiza, Lactobacillus crispatus, Lactobacillus curvatus, Lactobacillus delbrueckii, Lactobacillus fornicalis, Lactobacillus iners, Lactobacillus jensenii, Lactobacillus plantarum, Lactobacillus salivarius, Lactobacillus  sp. 7_1_47FAA,  Lactobacillus  sp. BL302 , Lactobacillus  sp. CR-609S,  Lactobacillus  sp. TAB-22 , Lactococcus  sp. MH5-2 , Lactonifactor longoviformis, Lautropia  sp. TeTO,  Leifsonia psychrotolerans, Leptotrichia buccalis, Leptotrichia goodfellowii, Leptotrichia hongkongensis, Leptotrichia shahii, Leptotrichia  sp. PTE15 , Leptotrichia  sp. oral taxon 225 , Leptotrichia trevisanii, Leptotrichia wadei, Leuconostoc inhae, Leuconostoc lactis, Luteimonas aestuarii, Lysinibacillus  sp. SJ2SN2 , Lysinibacillus sphaericus, Malassezia restricta, Marmoricola aurantiacus, Massilia  sp. MA5-1 , Massilia  sp. hp37 , Megamonas funiformis, Megasphaera genomosp . C1 , Mesorhizobium loti, Mesorhizobium  sp. RE 62 , Mesorhizobium  sp. mat916 , Methanobrevibacter smithii, Methylobacterium  sp. AMS64 , Methylobacterium  sp. CBMB45 , Methylobacterium  sp. PB142 , Methylobacterium  sp. PDD-23b-14 , Methylobacterium  sp. RK-2008-1 , Microbacterium lacticum, Microbacterium lacus, Microbacterium oxydans, Microbacterium  sp. PcRBo24 , Microbacterium  sp.  absalar, Microbacterium yannicii, Micrococcus luteus, Micrococcus  sp. M12-2-2 , Micrococcus  sp. WB18-01 , Microlunatus aurantiacus, Mobiluncus curtisii, Mobiluncus mulieris, Modestobacter multiseptatus, Modestobacter  sp. R-36506 , Mogibacterium pumilum, Moraxella nonliquefaciens, Moraxella  sp.,  Moraxella  sp. 1967 , Moraxella  sp. 26 , Moraxella  sp. BBN2P-02d,  Moraxella  sp. WB19-16 , Moryella indoligenes, Murdochiella  sp. S9 PR-10 , Mycobacterium  sp. 18 GUW,  Mycobacterium  sp. KNUC297 , Negativicoccus  sp. S5-A15 , Negativicoccus succinicivorans, Neisseria elongata, Neisseria macacae, Neisseria mucosa, Neisseria oralis, Neisseria sicca, Neisseria wadsworthii, Nocardioides daphniae, Nocardioides ginsengagri, Nocardioides mesophilus, Nocardioides  sp. BA32(2011),  Novosphingobium panipatense, Novosphingobium sediminicola, Novosphingobium  sp. iMX1 , Nubsella zeaxanthinifaciens, Ochrobactrum  sp. LC498 , Ochrobactrum  sp. SCTS14 , Ochrobactrum tritici, Odoribacter splanchnicus, Oerskovia  sp. Tibet-YD4604-5 , Oribacterium  sp. CM12 , Oribacterium  sp. oral taxon 078 , Ornithinimicrobium  sp. L5 , Pantoea agglomerans, Parabacteroides merdae, Paraprevotella clara, Parasutterella excrementihominis, Parvimonas micra, Pasteurella multocida, Paucibacter  sp. 186 , Paucibacter toxinivorans, Pedobacter  sp. DL5 , Pedomicrobium ferrugineum, Peptococcus  sp. S9 Pr-12 , Peptococcus  sp. canine oral taxon 344 , Peptococcus  sp. oral taxon i68 , Peptoniphilus  lacrimalis,  Peptoniphilus  sp. 1-14 , Peptoniphilus  sp. 2002-2300004 , Peptoniphilus  sp. 2002-38328 , Peptoniphilus  sp. 7-2 , Peptoniphilus  sp. S9 PR-13 , Peptoniphilus  sp. gpac018A,  Peptoniphilus  sp. gpac148 , Peptoniphilus  sp. oral taxon 375 , Peptostreptococcus anaerobius, Phascolarctobacterium faecium, Photobacterium  sp. CAIM 866 , Photobacterium  sp. squidInt_04 , Phyllobacterium  sp. T50 , Phyllobacterium trifolii, Planomicrobium alkanoclasticum, Planomicrobium  sp. TPD46 , Polaromonas aquatica, Porphyromonas asaccharolytica, Porphyromonas bennonis, Porphyromonas cangingivalis, Porphyromonas canoris, Porphyromonas catoniae, Porphyromonas crevioricanis, Porphyromonas endodontalis, Porphyromonas  sp. 2024b,  Porphyromonas uenonis, Prevotella bivia, Prevotella buccalis, Prevotella intermedia, Prevotella maculosa, Prevotella nanceiensis, Prevotella nigrescens, Prevotella oris, Prevotella oulorum, Prevotella pallens, Prevotella timonensis, Propionibacterium  sp. KPL1844 , Propionibacterium  sp. KPL2005 , Propionibacterium  sp. MSPo9A,  Propionibacterium  sp. V07/12348 , Pseudoclavibacter bifida, Pseudoclavibacter  sp.  Timone, Pseudoflavonifractor capillosus, Pseudomonas aeruginosa, Pseudomonas baetica, Pseudomonas brenneri, Pseudomonas citronellolis, Pseudomonas fluorescens, Pseudomonas monteilii, Pseudomonas  sp. CBMVAI 1177 , Pseudomonas  sp. DQ-01 , Pseudomonas  sp. G1116 , Pseudomonas  sp. GmFRB023 , Pseudomonas  sp. KNUC378 , Pseudomonas  sp. KVS86 , Pseudomonas  sp. PDD-31b-4 , Pseudomonas  sp. PKG89 , Pseudomonas  sp. PcFRBo68 , Pseudomonas  sp. PcFRB100,  Pseudomonas  sp. StFRB280, Pseudomonas sp. a101-18-2 , Pseudoxanthomonas japonensis, Psychrobacter sanguinis, Psychrobacter  sp. b110-1, Rahnella sp. FB303 , Ralstonia pickettii, Ralstonia  sp. A52 , Ralstonia  sp. CCUG 46389 , Ralstonia  sp. S2.MAC.005 , Rheinheimera sp. G 3DM-27 , Rhizobium etli, Rhizobium skierniewicense, Rhizobium  sp. 10II,  Rhizobium  sp. T45 , Rhodococcus erythropolis, Rhodococcus  sp. CO56 , Rhodococcus  sp. MARGlo,  Rhodococcus  sp. PDD-31b-7 , Rhodococcus  sp. p52 , Rhodopseudomonas boonkerdii, Roseburia inulinivorans, Roseburia  sp. 11SE39 , Roseomonas cervicalis, Rothia dentocariosa, Rothia  sp. CCUG 25688 , Rothia  sp. THG-N7 , Salinibacterium  sp. MDT1-9-1 , Selenomonas genomosp . P5 , Serratia nematodiphila, Shewanella  sp. 8113 , Shinella  sp. DR33 , Simonsiella muelleri, Skermanella aerolata, Solobacterium moorei, Sphingobacterium  sp. HTc4-a,  Sphingobacterium  sp. TB1 , Sphingobium yanoikuyae, Sphingomonas aquatilis, Sphingomonas oligophenolica, Sphingomonas  sp. 24T,  Sphingomonas  sp. 540 , Sphingomonas  sp. CS81 , Sphingomonas  sp. KOPRI 25661 , Sphingomonas  sp. PDD-26b-16 , Sphingomonas  sp. Z1-YC6841 , Sphingomonas yunnanensis, Spirosoma rigui, Staphylococcus aureus, Staphylococcus epidermidis, Staphylococcus equorum, Staphylococcus simulans, Staphylococcus  sp. 334802 , Staphylococcus  sp. 335602 , Staphylococcus  sp. C-D-MA2 , Staphylococcus  sp. C5116 , Staphylococcus  sp. C912 , Staphylococcus  sp. WB18-16 , Stenotrophomonas pavanii, Stenotrophomonas  sp. C-S-TSA3 , Stenotrophomonas  sp. I_63-LFP1A9B1 , Stenotrophomonas  sp. KITS-1 , Stenotrophomonas  sp. PDD-33b-8 , Stenotrophomonas  sp. Z2-S2 , Stomatobaculum longum, Streptococcus dysgalactiae, Streptococcus mutans, Streptococcus parasanguinis, Streptococcus pyogenes, Streptococcus  sp. 11aTha1 , Streptococcus  sp. 2011_Oral_MS_A3 , Streptococcus  sp. BS35a,  Streptococcus  sp. GMD6S,  Streptococcus  sp. S16-11 , Streptococcus  sp. canine oral taxon 279 , Streptococcus  sp. oral taxon G59 , Streptococcus thermophilus, Subdoligranulum variabile, Sutterella  sp. 252 , Sutterella stercoricanis, Tannerella forsythia, Tannerella  sp. oral taxon HOT-286 , Terrisporobacter glycolicus, Tessaracoccus lapidicaptus, Turicella otitidis, Varibaculum cambriense, Varibaculum  sp. CCUG 45114 , Varibaculum  sp. CCUG 61255 , Variovorax  sp. IMER-B2-7 , Variovorax  sp. MM43Nov,  Veillonella  atypica,  Veillonella  parvula,  Veillonella  sp. 2011_Oral_VSA_D3 , Veillonella  sp. AS16 , Veillonella  sp. CM60 , Veillonella  sp. MSA12 , Veillonella  sp. oral taxon 780 , Xanthomonas campestris, Xanthomonas gardneri, Abiotrophia, Acetitomaculum, Achromobacter, Acidaminococcus, Acidiphilium, Acidovorax, Acinetobacter, Actinobacillus, Actinomadura, Actinomyces, Aero coccus, Aeromonas, Aerosphaera, Aggregatibacter, Agromyces, Akkermansia, Albidovulum, Alicyclobacillus, Alkanindiges, Alloprevotella, Altererythrob acter, Amaricoccus, Amnibacterium, Anaerob acillus, Anaerococcus, Anaerosporobacter, Anaerostipes, Anoxybacillus, Aquabacterium, Aquamicrobium, Aquaspirillum, Arthrobacter, Atopobium, Aurantimonas, Aureimonas, Azospira, Bacillus, Bacteroides, Barnesiella, Belnapia, Bergeyella, Bifidobacterium, Bilophila, Blastocatella, Blautia, Bosea, Brachybacterium, Bradyrhizobium, Brevibacterium, Brevundimonas, Brochothrix, Burkholderia, Butyrivibrio, Campylobacter, Candidatus Alysiosphaera, Candidatus Saccharimonas, Candidatus Stoquefichus, Candidatus Xiphinematobacter, Capnocytophaga, Catonella, Caulobacter, Cellulomonas, Cellulosimicr obium, Centipeda, Chitinophaga, Chryseobacterium, Chryseomicrobium, Chthoniobacter, Citrobacter, Cloacibacterium, Clostridium, Comamonas, Conchiformibius, Corynebacterium, Craurococcus, Cupriavidus, Curvibacter, Cutibacterium, Defluviimonas, Deinococcus, Delftia, Dermacoccus, Desulfovibrio, Devosia, Dietzia, Dolosigranulum, Duganella, Eggerthella, Eisenbergiella, Elizabethkingia, Enterobacter, Enterococcus, Enterorhabdus, Erysipelatoclostridium, Erythrobacter, Euzebya, Exiguobacterium, Facklamia, Faecalibacterium, Ferruginibacter, Filifactor, Finegoldia, Flavisolibacter, Flavobacterium, Fretibacterium, Friedmanniella, Frigoribacterium, Fusibacter, Fusicatenibacter, Fusobacterium, Gallicola, Gardnerella, Gemella, Geobacillus, Gordonia, Granulicatella, Granulicella, Haematobacter, Halomonas, Herbaspirillum, Hespellia, Holdemania, Hymenobacter, Iamia, Intestinibacter, Intestinimonas, Janibacter, Jatrophihabitans, Jeotgalicoccus, Johnsonella, Kineosporia, Kingella, Klebsiella, Kluyvera, Knoellia, Kocuria, Kytococcus, Lachnoanaerobaculum, Lactobacillus, Lactococcus, Lactonifactor, Lautropia, Leifsonia, Leptotrichia, Leuconostoc, Luteimonas, Luteococcus, Lysinibacillus, Lysobacter, Malassezia, Marmoricola, Marvinbryantia, Massilia, Megamonas, Megasphaera, Mesorhizobium, Methanobrevibacter, Methylobacterium, Microbacterium, Micrococcus, Microvirga, Mobiluncus, Modestobacter, Mogibacterium, Moraxella, Murdochiella, Mycobacterium, Mycoplasma, Nakamurella, Negativicoccus, Neisseria, Nesterenkonia, Nitrososphaera, Nocardioides, Novosphingobium, Nubsella, Ochrobactrum, Odoribacter, Oerskovia, Oribacterium, Ornithinimicrobium, Oscillibacter, Oscillospira, Paenibacillus, Pantoea, Papillibacter, Paraprevotella, Parasutterella, Parvimonas, Pasteurella, Patulibacter, Pedobacter, Pedomicrobium, Peptoclostridium, Peptococcus, Peptoniphilus, Peptostreptococcus, Phascolarctobacterium, Phenylobacterium, Photobacterium, Phyllobacterium, Planococcus, Planomicrobium, Polaromonas, Porphyromonas, Prevotella, Propionibacterium, Propionimicrobium, Pseudoclavibacter, Pseudoflavonifractor, Pseudolabrys, Pseudomonas, Pseudonocardia, Pseudorhodoferax, Pseudoxanthomonas, Psychrobacter, Rahnella, Raistonia, Rhizobium, Rhodobacter, Rhodococcus, Rhodoplanes, Rhodopseudomonas, Robinsoniella, Roseburia, Roseomonas, Rubellimicrobium, Rummeliibacillus, Saccharibacillus, Salinibacterium, Sarcina, Serinicoccus, Shewanella, Shuttleworthia, Simonsiella, Singulisphaera, Skermanella, Solirubrobacter, Solobacterium, Sorangium, Sphingobacterium, Sphingobium, Sphingomonas, Spirosoma, Staphylococcus, Stenotrophomonas, Stomatobaculum, Streptococcus, Streptomyces, Subdoligranulum, Sutterella, Tannerella, Terrisporobacter, Tessaracoccus, Thalassospira, Turicella, Vagococcus, Varibaculum, Veillnella, Virgibacillus, Wautersiella, Weissella, Zymomonas

Metadata:
- Claim Count in Document: 74.0
- Percentile: 94.0
- Lexical Diversity: 2.10811
- Patent Class: 702.0
- Transitional Phrase Type: open
- Component Type: 1
- Foreign Priority: False
- Related Applications: ['15845190', '15844360', '15844139', '15068438', '15497072']

Analysis Scores:
- 35 USC 101 Eligibility (BERT): 0.2036329060878599
- 35 USC 102 Novelty (BERT): 0.5902992562996364
- Combined Prediction Score: 0.2422995411090375
- Mean Citation Score: 475.51612
- Max Citation Score: 616.0888
- Similarity Product: 397.191084955883

Labels:
- Claim Label 101: 1
- Claim Label 102: 1
- Claim Label 103: 1
- Claim Label 112: 0
- Combined Label: 1
- Label 101 Adjusted: 1

Dataset: test