PATENT CLAIM ANALYSIS

Application Number: 15997654
Application Type: Utility
Filing Date: 2018-06
Publication Date: 2018-10
Patent Classification: ["702", "019000"]

Abstract:
Embodiments of a method and/or system for characterizing one or more sleep-related conditions can include determining a microorganism dataset associated with a set of subjects; and/or performing a characterization process associated with the one or more sleep-related conditions, based on the microorganism dataset, where performing the characterization process can additionally or alternatively include performing a sleep-related characterization process for the one or more sleep-related conditions, and/or determining one or more therapies S 140.

Claim (Index 28):
The method of  claim 12 , wherein the first sleep-related condition comprises a shift work condition, wherein determining user microbiome features comprises determining the user microbiome composition features comprising a set of composition features associated with a mouth site and with at least one of:  Abiotrophia defectiva, Actinobacillus porcinus, Actinomyces dentalis, Actinomyces georgiae, Actinomyces gerencseriae, Actinomyces graevenitzii, Actinomyces massiliensis, Actinomyces meyeri, Actinomyces naeslundii, Actinomyces odontolyticus, Actinomyces oris, Actinomyces  sp.,  Actinomyces  sp. ICM34 , Actinomyces  sp. ICM41 , Actinomyces  sp. ICM47 , Actinomyces  sp. ICM54 , Actinomyces  sp. ICM58 , Actinomyces  sp. S6-Spd3 , Actinomyces  sp. ZSY-1 , Actinomyces  sp. oral strain Hal-1065 , Actinomyces  sp. oral taxon 170 , Actinomyces  sp. oral taxon 175 , Actinomyces  sp. oral taxon 178 , Actinomyces  sp. oral taxon 448 , Actinomyces  sp. ph3 , Actinomyces viscosus, Aerococcus christensenii, Aggregatibacter aphrophilus, Aggregatibacter segnis, Akkermansia muciniphila, Alistipes finegoldii, Alistipes inops, Alistipes putredinis, Alistipes  sp. EBA6-25c12 , Alistipes  sp. HGB5 , Alistipes  sp. NML05A004 , Alistipes  sp. RMA 9912 , Alloprevotella rava, Alloprevotella tannerae, Alloscardovia omnicolens, Anaeroglobus geminatus, Anaerostipes hadrus, Anaerostipes  sp. 5_1_63FAA,  Anaerotruncus  sp. NML 070203 , Asaccharospora irregularis, Atopobium parvulum, Atopobium rimae, Atopobium  sp. DMCT15023 , Atopobium  sp. ICM57 , Bacteroides acidifaciens, Bacteroides caccae, Bacteroides clarus, Bacteroides coprocola, Bacteroides eggerthii, Bacteroides fragilis, Bacteroides intestinalis, Bacteroides massiliensis, Bacteroides nordii, Bacteroides plebeius, Bacteroides  sp. 3_1_40A,  Bacteroides  sp. AR200 , Bacteroides  sp. AR29 , Bacteroides  sp. D22 , Bacteroides  sp. DJF_B097 , Bacteroides  sp. EBA5-17 , Bacteroides  sp. J1511 , Bacteroides  sp. SLC1-38 , Bacteroides  sp. XB12B,  Bacteroides  sp. XB44A,  Bacteroides stercorirosoris, Bacteroides stercoris, Bacteroides thetaiotaomicron, Bacteroides uniformis, Bacteroides vulgatus, Barnesiella intestinihominis, Bergeriella denitrificans, Bifidobacterium adolescentis, Bifidobacterium kashiwanohense, Bifidobacterium longum, Bifidobacterium  sp. MSX5B,  Bilophila wadsworthia, Blautia faecis, Blautia luti, Blautia  sp. YHC-4 , Blautia stercoris, Blautia wexlerae, Bradyrhizobium  sp. 68A4SAPT,  Brevundimonas  sp. FXJ8.080 , Butyricimonas faecihominis, Butyricimonas paravirosa, Butyricimonas virosa, Butyrivibrio crossotus, Campylobacter concisus, Campylobacter gracilis, Campylobacter showae, Campylobacter  sp. 10_1_50 , Campylobacter  sp. FOBRC15 , Campylobacter ureolyticus, Capnocytophaga gingivalis, Capnocytophaga granulosa, Capnocytophaga haemolytica, Capnocytophaga ochracea, Capnocytophaga  sp. AHN9576 , Capnocytophaga  sp. AHN9687 , Capnocytophaga  sp. AHN9756 , Capnocytophaga  sp. CM59 , Capnocytophaga  sp. HS5_2W_I24 , Capnocytophaga  sp. oral taxon 335 , Capnocytophaga  sp. oral taxon 336 , Capnocytophaga  sp. oral taxon 338 , Capnocytophaga sputigena, Cardiobacterium hominis, Catenibacterium mitsuokai, Catonella morbi, Centipeda periodontii, Clostridioides difficile, Collinsella aerofaciens, Coprobacter fastidiosus, Corynebacterium durum, Corynebacterium glucuronolyticum, Corynebacterium matruchotii, Corynebacterium  sp.,  Corynebacterium spheniscorum, Corynebacterium ulcerans, Cryptobacterium curtum, Cutibacterium acnes, Delftia lacustris, Delftia  sp. BN-SKY3 , Desulfobulbus  sp. oral taxon 041 , Desulfovibrio  sp. 3_1_syn3 , Dialister invisus, Dialister micraerophilus, Dialister pneumosintes, Dolosigranulum pigrum, Dorea formicigenerans, Dorea longicatena, Eggerthella lenta, Eggerthia catenaformis, Eikenella corrodens, Eisenbergiella tayi, Erysipelatoclostridium ramosum, Faecalibacterium prausnitzii, Faecalibacterium  sp. canine oral taxon 147 , Filifactor alocis, Finegoldia  sp. S8 F7 , Finegoldia  sp. S9 AA1-5 , Flavonifractor plautii, Fretibacterium fastidiosum, Fusicatenibacter saccharivorans, Fusobacterium nucleatum, Fusobacterium periodonticum, Fusobacterium  sp. AS2 , Fusobacterium  sp. CM21 , Fusobacterium  sp. CM22 , Fusobacterium  sp. OBRC1 , Gardnerella vaginalis, Gemella morbillorum, Gemella sanguinis, Gemella  sp. 933-88 , Gordonibacter pamelaeae, Granulicatella adiacens, Granulicatella elegans, Haemophilus influenzae, Haemophilus parainfluenzae, Herbaspirillum seropedicae, Kingella oralis, Kluyvera georgiana, Lachnoanaerobaculum orale, Lachnoanaerobaculum saburreum, Lachnoanaerobaculum  sp. MSX33 , Lachnoanaerobaculum  sp. OBRC5-5 , Lachnoanaerobaculum umeaense, Lachnospira pectinoschiza, Lactobacillus crispatus, Lactobacillus paracasei, Lactobacillus salivarius, Lactobacillus  sp. 7_1_47FAA,  Lactobacillus  sp.  Akhmrol, Lactobacillus  sp. BL302 , Lactobacillus  sp. NRCT-KU 1 , Lactobacillus vaginalis, Lautropia  sp. TeTO,  Leptotrichia buccalis, Leptotrichia genomosp . C1 , Leptotrichia goodfellowii, Leptotrichia hofstadii, Leptotrichia hongkongensis, Leptotrichia shahii, Leptotrichia  sp. PG10 , Leptotrichia  sp. PTE15 , Leptotrichia  sp. oral taxon 223 , Leptotrichia  sp. oral taxon 225 , Leptotrichia trevisanii, Leptotrichia wadei, Lysinibacillus  sp. SJ2SN2, Mannheimia  granulomatis, Megamonas funiformis, Megasphaera genomosp . C1 , Megasphaera massiliensis, Megasphaera micronuciformis, Megasphaera  sp. UPII 199-6 , Methanobrevibacter smithii, Methanosphaera stadtmanae, Methylobacterium longum, Methylobacterium  sp. RK-2008-1 , Mogibacterium pumilum, Mogibacterium  sp. CM50 , Mogibacterium  sp. CM96 , Mogibacterium timidum, Moraxella  sp. WB19-16 , Mycoplasma falconis, Mycoplasma salivarium, Mycoplasma subdolum, Neisseria bacilliformis, Neisseria elongata, Neisseria flavescens, Neisseria macacae, Neisseria mucosa, Neisseria oralis, Neisseria shayeganii, Neisseria sicca, Neisseria skkuensis, Neisseria  sp. 104(2012),  Odoribacter laneus, Odoribacter splanchnicus, Olsenella  sp. F0004 , Oribacterium  sp. CM12 , Oribacterium  sp. oral taxon 078 , Oribacterium  sp. oral taxon 102 , Oribacterium  sp. oral taxon 108 , Parabacteroides distasonis, Parabacteroides faecis, Parabacteroides goldsteinii, Parabacteroides gordonii, Parabacteroides johnsonii, Parabacteroides merdae, Parascardovia denticolens, Parasutterella excrementihominis, Parvimonas micra, Parvimonas  sp. oral taxon 393 , Peptococcus  sp. oral taxon 168 , Peptoniphilus  sp. 2002-2300004 , Peptoniphilus  sp. gpac018A,  Peptostreptococcus stomatis, Phascolarctobacterium faecium, Phascolarctobacterium  sp. 377 , Phascolarctobacterium succinatutens, Porphyromonas bennonis, Porphyromonas catoniae, Porphyromonas endodontalis, Porphyromonas gingivalis, Porphyromonas uenonis, Prevotella aurantiaca, Prevotella bivia, Prevotella disiens, Prevotella intermedia, Prevotella nanceiensis, Prevotella nigrescens, Prevotella oralis, Prevotella oris, Prevotella oulorum, Prevotella pallens, Prevotella  sp. WAL 2039G,  Prevotella  sp. oral taxon 299 , Prevotella  sp. oral taxon G60 , Propionibacterium  sp. MSP09A,  Pseudomonas  sp. KB23 , Pseudopropionibacterium propionicum, Rhizobium  sp. T45 , Robinsoniella  sp. KNHs210 , Rodentibacter pneumotropicus, Roseburia faecis, Roseburia hominis, Roseburia intestinalis, Roseburia inulinivorans, Roseburia  sp. 11SE39 , Rothia aeria, Rothia dentocariosa, Rothia mucilaginosa, Rothia  sp. CCUG 25688 , Rothia  sp. THG-N7 , Scardovia wiggsiae, Selenomonas genomosp . P5 , Selenomonas  sp. CM52 , Shuttleworthia  sp. oral taxon G69 , Slackia  sp. NATTS,  Solobacterium moorei, Solobacterium sp. S 4-A19 , Staphylococcus epidermidis, Staphylococcus  sp. 334802 , Staphylococcus  sp. C912 , Stomatobaculum longum, Streptococcus dentirousetti, Streptococcus gordonii, Streptococcus infantis, Streptococcus intermedius, Streptococcus mitis, Streptococcus mutans, Streptococcus parasanguinis, Streptococcus peroris, Streptococcus  sp. 11aTha1 , Streptococcus  sp. 2011_Oral_MS_A3 , Streptococcus  sp. 2011_Oral_MS_H4 , Streptococcus  sp. BS35a,  Streptococcus  sp. GMD6S,  Streptococcus  sp. oral taxon G59 , Streptococcus  sp. oral taxon G63 , Streptococcus thermophilus, Subdoligranulum variabile, Sutterella sterco ricanis, Sutterell a wadsworthensis, Tannerella forsythia, Tannerella  sp. oral taxon HOT-286,  Terrisporobacter glycolicus, Tessaracoccus lapidicaptus, Vagococcus  sp. SIX2 (2011),  Varibaculum cambriense, Veillonella atypica, Veillonella dispar, Veillonella parvula, Veillonella rogosae, Veillonella  sp. 2011_Oral_VSA_B12 , Veillonella  sp. 2011_Oral_VSA_D3 , Veillonella  sp. 6_127 , Veillonella  sp. CM60 , Veillonella  sp. JL-2 , Veillonella  sp. oral taxon 780 , Veillonella tobetsuensis, [Collinsella] massiliensis, Abiotrophia, Acetitomaculum, Achromobacter, Actinobacillus, Actinomyces, Aerococcus, Aggregatibacter, Akkermansia, Alistipes, Alloprevotella, Alloscardovia, Alysiella, Anaerobacillus, Anaerococcus, Anaeroglobus, Anaeroplasma, Anaerosporobacter, Anaerostipes, Anaerotruncus, Anaerovorax, Asaccharospora, Atopobium, Barnesiella, Bergeriella, Bergeyella, Bifidobacterium, Bilophila, Blautia, Brevundimonas, Butyricimonas, Butyrivibrio, Campylobacter, Candidatus Saccharimonas, Candidatus Soleaferrea, Capnocytophaga, Cardiobacterium, Catenibacterium, Catonella, Centipeda, Chryseobacterium, Clostridium, Collinsella, Comamonas, Coprobacter, Corynebacterium, Cryptobacterium, Delftia, Desulfobulbus, Dialister, Dolosigranulum, Dorea, Eggerthella, Eggerthia, Eikenella, Eisenbergiella, Enterococcus, Enterorhabdus, Erysipelatoclostridium, Faecalibacterium, Fibrobacter, Filifactor, Finegoldia, Flavobacterium, Flavonifractor, Fretibacterium, Fusicatenibacter, Fusobacterium, Gardnerella, Gemella, Gordonibacter, Granulicatella, Haemophilus, Herbaspirillum, Howardella, Intestinibacter, Intestinimonas, Johnsonenella, Kingella, Kluyvera, Lachnoanaerobaculum, Lachnospira, Lactobacillus, Lautropia, Leptotrichia, Marvinbryantia, Megamonas, Megasphaera, Methanobrevibacter, Methanosphaera, Methylobacterium, Mogibacterium, Moraxella, Moryella, Mycobacterium, Neisseria, Odoribacter, Olsenella, Oribacterium, Oscillibacter, Oscillospira, Pantoea, Parabacteroides, Paraprevotella, Parascardovia, Parasporobacterium, Parasutterella, Parvimonas, Pasteurella, Peptoclostridium, Peptococcus, Peptostreptococcus, Porphyromonas, Prevotella, Propionibacterium, Pseudobutyrivibrio, Rhizobium, Roseburia, Rothia, Sarcina, Scardovia, Selenomonas, Shuttleworthia, Solobacterium, Sphingomonas, Staphylococcus, Stomatobaculum, Streptococcus, Subdoligranulum, Sutterella, Tannerella, Terrisporobacter, Tessaracoccus, Vagococcus, Veillonella, Victivallis

Metadata:
- Claim Count in Document: 74.0
- Percentile: 94.0
- Lexical Diversity: 2.10811
- Patent Class: 702.0
- Transitional Phrase Type: open
- Component Type: 1
- Foreign Priority: False
- Related Applications: ['15845190', '15844360', '15844139', '15068438', '15497072']

Analysis Scores:
- 35 USC 101 Eligibility (BERT): 0.2011119824912229
- 35 USC 102 Novelty (BERT): 0.60029639749541
- Combined Prediction Score: 0.2410304239916416
- Mean Citation Score: 475.51612
- Max Citation Score: 616.0888
- Similarity Product: 430.88395531044006

Labels:
- Claim Label 101: 1
- Claim Label 102: 1
- Claim Label 103: 1
- Claim Label 112: 0
- Combined Label: 1
- Label 101 Adjusted: 1

Dataset: test