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[FFN paper], [data from the paper]

We downloaded and processed the data into formats that are easier to share.

  • Ground truth

    • train: j0126-train-34vol.zip, 34 densely labeled subvolumes
    • validaiton: valid_12_skeletons.h5, manually traced skeletons for 12 neurons
    • test: test_50_skeletons.h5, manually traced skeletons for 50 neurons
  • FFN result (due to the file size constraint, we split the zip into two files)

# first, merge the two parts together
zip -s 0 ffn_seg_part.zip --out ffn_seg.zip
rm ffn_seg_part*
# then, unzip the segmentation in tiles of the size 128x2048x2048 (saved in h5)
unzip ffn_seg.zip
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