erdes / README.md
yozkut's picture
Update README with resource links and license
7867e25
metadata
license: cc-by-4.0
task_categories:
  - video-classification
tags:
  - medical
  - ultrasound
  - eye
  - ocular
  - classification
arxiv: 2508.04735
size_categories:
  - 1K<n<10K
language:
  - en
pretty_name: erdes
dataset_info:
  features:
    - name: clip_id
      dtype: string
    - name: file_path
      dtype: string
    - name: diagnostic_class
      dtype: string
    - name: subtype
      dtype: string
    - name: anatomical_subclass
      dtype: string
    - name: fps
      dtype: float32
    - name: frame_count
      dtype: int32
    - name: width
      dtype: int32
    - name: height
      dtype: int32
    - name: duration_seconds
      dtype: float32
  splits:
    - name: train
      num_examples: 5381
configs:
  - config_name: default
    data_files:
      - split: train
        path: metadata.csv
  - config_name: non_rd_vs_rd
    data_files:
      - split: train
        path: splits/non_rd_vs_rd/train.csv
      - split: validation
        path: splits/non_rd_vs_rd/val.csv
      - split: test
        path: splits/non_rd_vs_rd/test.csv
  - config_name: macula_detached_vs_intact
    data_files:
      - split: train
        path: splits/macula_detached_vs_intact/train.csv
      - split: validation
        path: splits/macula_detached_vs_intact/val.csv
      - split: test
        path: splits/macula_detached_vs_intact/test.csv
  - config_name: normal_vs_pvd
    data_files:
      - split: train
        path: splits/normal_vs_pvd/train.csv
      - split: validation
        path: splits/normal_vs_pvd/val.csv
      - split: test
        path: splits/normal_vs_pvd/test.csv
  - config_name: normal_vs_rd
    data_files:
      - split: train
        path: splits/normal_vs_rd/train.csv
      - split: validation
        path: splits/normal_vs_rd/val.csv
      - split: test
        path: splits/normal_vs_rd/test.csv
  - config_name: pvd_vs_rd
    data_files:
      - split: train
        path: splits/pvd_vs_rd/train.csv
      - split: validation
        path: splits/pvd_vs_rd/val.csv
      - split: test
        path: splits/pvd_vs_rd/test.csv

ERDES: Eye Retinal Detachment Ultrasound Dataset

Resource Link
Website Website
Paper arXiv
Checkpoints HF Checkpoints Zenodo
Dataset Zenodo
Code GitHub

πŸ“Œ Introduction

ERDES is a large-scale, publicly available dataset of 3D ocular ultrasound videos for retinal and macular detachment classification. It was introduced in our paper ERDES: A Benchmark Video Dataset for Retinal Detachment and Macular Status Classification in Ocular Ultrasound. The corpus consists of 5,381 expertly annotated video clips totaling 5 hours and 10 minutes, providing a valuable resource for medical AI research in ophthalmology.

Key Features:

  • 5,381 labeled ultrasound video clips
  • Expert annotations for retinal detachment (RD) and macular status
  • Structured classification (Normal, RD, PVD, macula-detached/intact)
  • Preprocessed for privacy and consistency

🎯 Motivation

Medical video datasets for AI are scarce despite their clinical importance. ERDES bridges this gap by offering:

  • A standardized benchmark for retinal detachment classification in ultrasound videos.
  • Support for spatiotemporal analysis (e.g., 3D CNNs).
  • Open access to accelerate research in ocular diagnostics.

πŸ“Š Dataset Overview

1. Data Structure

Videos are categorized into two primary groups:

Non-RD (Non-Retinal Detachment):

  • Normal
  • Posterior Vitreous Detachment (PVD)

RD (Retinal Detachment):

  • Macula-Detached
    • Bilateral (nasal and temporal regions involved)
    • Temporal detachment only
  • Macula-Intact
    • Nasal detachment
    • Temporal detachment
Folder Structure

2. Annotations

Each clip is labeled by sonologists for:

  • Presence/absence of retinal detachment.
  • Macular involvement (detached/intact).
Data Statistics

3. Preprocessing

  • Privacy: PHI removed using YOLOv8-based globe detection.
  • Consistency: Cropped to the ocular ROI.
  • Format: MP4 videos.

πŸ“₯ Download

Access the dataset via the HuggingFace API:

from datasets import load_dataset

dataset = load_dataset("pcvlab/erdes")

πŸ› οΈ Code & Baselines

We open source our baseline experiments on our GitHub repo, which includes:

  • Baseline 3D CNN and ViT models for classification.
  • End-to-end diagnostic pipeline for macular detachment.

πŸ“œ Citation

If you use ERDES, please cite:

@article{ozkuterdes,
  title={ERDES: A Benchmark Video Dataset for Retinal Detachment and Macular Status Classification in Ocular Ultrasound},
  author={Ozkut, Yasemin and Navard, Pouyan and Adhikari, Srikar and Situ-LaCasse, Elaine and Acu{\~n}a, Josie and Yarnish, Adrienne A and Yilmaz, Alper},
  journal={arXiv preprint arXiv:2508.04735},
  year={2025}
}