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removing the
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Download zenodo dataset files using huggingface datasets
You can download a specific file from the Zenodo dataset using the following code:
Zenodo id : 5172018 File name : FDB-17-fragmentset.smi.gz
from datasets import load_dataset
load_dataset("osbm/zenodo", "5172018_FDB-17-fragmentset.smi.gz")
This command will also copy the file into your current directory so that you can use it directly.
Here is an example notebook: https://gist.github.com/osbm/35a499f5756df22de30be20463aa6331
Contribution
The huggingface repository is actually a mirror of the github repository osbm/zenodo. If you want to open an issue or PR, please do it on the github repository. I chose to do it this way because I wanted to use github actions. Currently only github action is mirroring the repository to huggingface. 😅
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