Source: https://www.vutbr.cz/en/people/radim-kolar-2796/publikace
Timestamp: 2019-04-24 22:13:57+00:00

Document:
VIČAR, T.; GUMULEC, J.; BALVAN, J.; HRACHO, M.; KOLÁŘ, R. Label-free nuclear staining reconstruction in quantitative phase images using deep learning. In World Congress on Medical Physics and Biomedical Engineering, June 3-8, 2018, Prague, Czech Republic. Springer, Singapore, 2018. p. 1-4. ISBN: 978-981-10-9034-9.
TORNOW, R.; ODSTRČILÍK, J.; KOLÁŘ, R. Time-resolved quantitative inter-eye comparison of cardiac cycle-induced blood volume changes in the human retina. Biomedical Optics Express, 2018, vol. 9, no. 12, p. 6237-6254. ISSN: 2156-7085.
JAKUBÍČEK, R.; CHMELÍK, J.; NECKÁŘ, J.; KOLÁŘ, R. Automatic Segmentation of Myocardial Infarction in Rats Subjected to Regional Ischemia. In Computing in Cardiology 2018. Computing in Cardiology. Maastricht, Netherlands: Computing in Cardiology, 2018. p. 1-4. ISSN: 2325-887X.
HESKO, B.; KOLÁŘ, R.; HARABIŠ, V. Optical Disc Segmentation Using Fully Convolutional Neural Network in Retina Images. In Proceedings of IEEE Student Branch Conference Blansko 2018. 2018. Brno: Vysoké učení technické v Brně, Fakulta elektrotechniky a komunikačních technologií, 2018. p. 16-20. ISBN: 978-80-214-5661-7.
ŠTOHANZLOVÁ, P.; KOLÁŘ, R. Tissue perfusion modelling in optical coherence tomography. BIOMED ENG ONLINE, 2017, vol. 16, no. 1, p. 1-16. ISSN: 1475-925X.
LIBERDOVÁ, I.; KOLÁŘ, R. Simultaneous ECG, finger and retinal photoplethysmography measurement. In Proceedings of The 23rd Conference STUDENT EEICT 2017. 1. Brno: Vysoké učení technické vBrně, Fakulta elektrotechniky a komunikačních technologií, 2017. p. 329-333. ISBN: 978-80-214-5496- 5.
ŠIKNER, T.; KOLÁŘ, R. Impact of gain on high–frequency contrast– enhanced ultrasound video and radio frequency data. Elektrorevue - Internetový časopis (http://www.elektrorevue.cz), 2017, vol. 19, no. 3, p. 73-77. ISSN: 1213-1539.
HRACHO, M.; KOLÁŘ, R.; LABOUNKOVÁ, I.; ODSTRČILÍK, J.; TORNOW, R. Automatic detection of spontaneous venous pulsations using retinal image sequences. In Proceedings of the IV ECCOMAS Thematic Conference on Computational Vision and Medical Image Processing: VipIMAGE 2017. Taylor and Francis, Publication, 2017. p. 1-9. ISBN: 9780415457774.
HESKO, B.; KOLÁŘ, R.; HARABIŠ, V. Design of an experimental laser speckle contrast imaging system and image evaluation. Lékař a technika, 2017, vol. 47, no. 3, p. 101-107. ISSN: 0301-5491.
VIČAR, T.; KOLÁŘ, R. Random Forests Pixel-wise Classification for Detection and Segmentation of Cells in the Images from Holographic Microscope. In Proceedings of IEEE Student Branch Conference Mikulov 2017. Brno: Vysoké učení technické v Brně, Fakulta elektrotechniky a komunikačních technologií, 2017. p. 67-70. ISBN: 978-80-214-5526-9.
HESKO, B.; KOLÁŘ, R.; HARABIŠ, V. Vessels model for laser speckle contrast imaging method. In Proceedings of IEEE Student Branch Conference Mikulov 2017. Brno: Vysoké učení technické v Brně, Fakulta elektrotechniky a komunikačních technologií, 2017. p. 25-29. ISBN: 978-80-214-5526- 9.
TORNOW, R.; MILCZAREK, A.; ODSTRCILIK, J.; KOLAR, R. Binocular video ophthalmoscope for simultaneous recording of sequences of the human retina to compare dynamic parameters. In SPIE Proceedings (Optical Society of America). Novel Biophotonics Techniques and Applications IV. Mnichov: 2017. p. 1-6. ISBN: 9781510612846.
KOLÁŘ, R.; LABOUNKOVÁ, I.; ODSTRČILÍK, J.; HRACHO, M.; TORNOW, R. Detection of distorted frames in retinal video-sequences via machine learning. In SPIE Proceedings (Optical Society of America). Novel Biophotonics Techniques and Applications IV. SPIE-OSA, 2017. p. 1-4. ISBN: 9781510612846.
KOLÁŘ, R.; TORNOW, R.; ODSTRČILÍK, J.; LIBERDOVÁ, I. Registration of retinal sequences from new video- ophthalmoscopic camera. BIOMED ENG ONLINE, 2016, vol. 15, no. 57, p. 1-17. ISSN: 1475-925X.
LIBERDOVÁ, I.; KOLÁŘ, R.; TORNOW, R. Image Quality Assessment of ophthalmologic videosequences using phase correlation. Elektrorevue - Internetový časopis (http://www.elektrorevue.cz), 2016, vol. 18, no. 5, p. 153-159. ISSN: 1213-1539.
MÉZL, M.; JIŘÍK, R.; DVOŘÁKOVÁ, L.; DRAŽANOVÁ, E.; KOLÁŘ, R. Comparison of Arterial Input Function Models for, Small- Animal Ultrasound Perfusion Imaging. In Proceedings of 2016 IEEE International Ultrasonics Symposium. Tours, Francie: IEEE Ultrasonics, Ferroelectrics, and Frequency Control Society, 2016. p. 1-4. ISBN: 978-1-4673-9897- 8.
LIBERDOVÁ, I.; KOLÁŘ, R. Video Quality Assessment in Experimental Retinal Imaging. In Sborník příspěvků studentské konference Blansko. 1. Blansko: Brno University of Technology, 2016. p. 51-54. ISBN: 978-80-214-5389- 0.
ODSTRČILÍK, J.; KOLÁŘ, R.; TORNOW, R.; BUDAI, A.; JAN, J.; MACKOVÁ, P.; VODÁKOVÁ, M. Analysis of the Retinal Nerve Fiber Layer Texture Related to the Thickness Measured by Optical Coherence Tomography. In Developments in Medical Image Processing and Computational Vision. Lecture Notes in Computational Vision and Biomechanics. Switzerland: Springer International Publishing, 2015. p. 19-40. ISBN: 978-3-319-13406- 2.
ŠIKNER, T.; KOLÁŘ, R. Registration of Contrast- Enhanced Ultrasound Sequences. In Proceedings of the 21st Conference STUDENT EEICT 2015. 2015. p. 495-499. ISBN: 978-80-214-5148- 3.
MÉZL, M.; JIŘÍK, R.; HARABIŠ, V.; KOLÁŘ, R.; STANDARA, M.; NYLUND, K.; GILJA, O.; TAXT, T. Absolute ultrasound perfusion parameter quantification of a tissue- mimicking phantom using bolus tracking. IEEE Transactions on Ultrasonocs, Ferroelectrics, and Frequency Control, 2015, vol. 62, no. 5, p. 983-987. ISSN: 0885- 3010.
ŠIKNER, T.; JANOUŠEK, O.; KOLÁŘ, R. Detrended fluctuation analysis of heart rate variability: Comparison of classic and frequency- based parameters. Elektrorevue - Internetový časopis (http://www.elektrorevue.cz), 2015, vol. 6, no. 2, p. 30-36. ISSN: 1213- 1539.
ŠTOHANZLOVÁ, P.; KOLÁŘ, R. Flow rate estimation by optical coherence tomography using contrast dilution approach. In Optical Coherence Imaging Techniques and Imaging in Scattering Media. 9541. Munich: SPIE, 2015. p. 954107- 1 (954107-6 p.)ISBN: 9781628417067.
ODSTRČILÍK, J.; ČMIEL, V.; KOLÁŘ, R.; RONZHINA, M.; BAIAZITOVA, L.; PEŠL, M.; PŘIBYL, J.; PROVAZNÍK, I. Computer Analysis of Isolated Cardiomyocyte Contraction Process via Advanced, Image Processing Techniques. In Computing in Cardiology 2015. 42. Nice, France: Computing in Cardiology, Inc., 2015. p. 453-456. ISBN: 978-1-4799-4347- 0.
DRAHANSKÝ, M.; KOLÁŘ, R.; MŇUK, T. Elektronické zařízení pro snímání obrazu sítnice a duhovky oka. Česká a slovenská oftalmologie, 2015, vol. 71, no. 6, p. 302-308. ISSN: 1211-9059.
KOLÁŘ, R.; TORNOW, R.; ODSTRČILÍK, J. Video ophthalmoscope measures fast temporal changes in the human retina. SPIE Newsroom, 2015, no. 2015, p. 1-2. ISSN: 1818- 2259.
KOLÁŘ, R.; TORNOW, R.; ODSTRČILÍK, J. Retinal Image Registration for Eye Movement Estimation. In Proceedings of IEEE EMBC. Proceedings IEEE EMBC. 2015. p. 5247-5250. ISBN: 978-1-4244-9270- 1. ISSN: 1557- 170X.
TORNOW, R.; KOLÁŘ, R.; ODSTRČILÍK, J. Non- mydriatic video ophthalmoscope to measure fast temporal changes of the human retina. In Proceedings of SPIE, Volume 9540. 2015. p. 954006 (954006-6 p.)ISBN: 9781628417050.
MÉZL, M.; JIŘÍK, R.; SOUČEK, K.; KOLÁŘ, R. Evaluation of Accuracy of Bolus and Burst Method for Quantitative Ultrasound Perfusion Analysis with Various Arterial Input Function Models. In Proceedings on IEEE International Ultrasonics Symposium 2015. 2015. p. 1-4. ISBN: 978-1-4799-8182- 3.
KOLÁŘ, R.; SEMERÁD, L.; DRAHANSKÝ, M.; ODSTRČILÍK, J.; HÁJEK, J.; BOROVSKÝ, J. Bimodal Eye Imaging System for Biometric and Medical Applications. In Security and Protection of Information 2015. Brno: University of Defence in Brno, 2015. p. 83-95. ISBN: 978-80-7231-997-8.
HÁJEK, J.; DRAHANSKÝ, M.; KOLÁŘ, R.; ODSTRČILÍK, J.; BOROVSKÝ, J. Bimodal eye imaging system. In Signal-Image Technology and Internet-Based Systems. Bangkok: Institute of Electrical and Electronics Engineers, 2015. p. 572-575. ISBN: 978-1-4673-9721-6.
ODSTRČILÍK, J.; KOLÁŘ, R.; HARABIŠ, V.; TORNOW, R. Classification- Based Blood Vessel Segmentation in Retinal Images. In Computational Vision and Medical Image Processing V. London, UK: CRC Press Taylor and Francis Group, 2015. p. 95-100. ISBN: 978-1-138-02926- 2.
ODSTRČILÍK, J.; KOLÁŘ, R.; TORNOW, R.; JAN, J.; BUDAI, A.; MAYER, M.; VODÁKOVÁ, M.; LAEMMER, R.; LAMOŠ, M.; KUNA, Z.; GAZÁREK, J.; KUBĚNA, T.; ČERNOŠEK, P.; RONZHINA, M. Thickness related textural properties of retinal nerve fiber layer in color fundus images. COMPUTERIZED MEDICAL IMAGING AND GRAPHICS, 2014, vol. 38, no. 6, p. 508-516. ISSN: 0895- 6111.
ODSTRČILÍK, J.; KOLÁŘ, R.; JAN, J.; TORNOW, R.; BUDAI, A. Blood Vessel Segmentation in Video- Sequences From the Human Retina. In 2014 IEEE International Conference on Imaging Systems and Techniques (IST) Proceedings. Santorini, Greece: IEEE, 2014. p. 129-133. ISBN: 978-1-4799-6748- 3.
ŠTOHANZLOVÁ, P.; KOLÁŘ, R. Fantom pro optickou koherentní tomografii - použití pro perfuzní analýzu. In Nové směry v biomedicínském inženýrství. Brno: UBMI, VUT v Brně, 2014. p. 61-70. ISBN: 978-80-214-5049- 3.
HÁJEK, J.; DRAHANSKÝ, M.; KOLÁŘ, R. Experimental ophthalmic multimodal imaging system for iris and retina. In Proceedings of IIAI 3rd International Conference on Advanced Applied Informatics. Kitakyushu: IEEE Computer Society, 2014. p. 676-679. ISBN: 978-1-4799-4174-2.
KOLÁŘ, R.; HOEHER, B.; ODSTRČILÍK, J.; SCHMAUSS, B.; JAN, J. Registration of image sequences from experimental low- cost fundus camera. In Biomedical Image Registration. Lecture Notes in Computer Science. London: Springer International Publishing, 2014. p. 174-183. ISBN: 978-3-319-08553- 1.
KOLÁŘ, R.; PODLIPNÁ, P. Analysis of images from optical coherence tomography for the nanoparticle transport. In Medical Image Understanding and Analysis. London: BMVA, 2014. p. 215-221. ISBN: 1-901725-51- 0.
ŠIKNER, T.; KOLÁŘ, R. Modifikace detrendované analýzy fluktuace využívající charakteristický tvar DFA křivky. In Nové směry v biomedicínském inženýrství. 2014. p. 55-60. ISBN: 978-80-214-5049- 3.
JIŘÍK, R.; NYLUND, K.; TAXT, T.; MÉZL, M.; HAUSKEN, T.; HARABIŠ, V.; KOLÁŘ, R.; STANDARA, M.; GILJA, O. Parametric Ultrasound Perfusion Analysis Parametric Ultrasound Perfusion Analysis Combining Bolus Tracking and Replenishment. In 2012 IEEE International Ultrasonics Symposium Proceedings. 2013. p. 1323-1326. ISBN: 978-1-4577-1253- 1.
HARABIŠ, V.; KOLÁŘ, R.; MÉZL, M.; JIŘÍK, R. Comparison and evaluation of indicator dilution models for bolus of ultrasound contrast agents. PHYSIOLOGICAL MEASUREMENT, 2013, vol. 34, no. 2, p. 151-162. ISSN: 0967- 3334.
ODSTRČILÍK, J.; KOLÁŘ, R.; BUDAI, A.; HORNEGGER, J.; JAN, J.; GAZÁREK, J.; KUBĚNA, T.; ČERNOŠEK, P.; SVOBODA, O.; ANGELOPOULOU, E. Retinal Vessel Segmentation by Improved Matched Filtering: Evaluation on a New High– Resolution Fundus Image Database. IET Image Processing, 2013, vol. 7, no. 4, p. 373-383. ISSN: 1751- 9659.
SLÁVIK, V.; KOLÁŘ, R.; HARABIŠ, V.; JIŘÍK, R. Application of Nakagami Distributions in Ultrasound Contrast Imaging. In Measurement 2013 Proceedings. Slovakia: VEDA, 2013. p. 117-120. ISBN: 978-80-969672-5- 4.
PODLIPNÁ, P.; KOLÁŘ, R. Single fiber perfusion phantom for optical coherence tomography. In Optical Coherence Tomography and Coherence Techniques VI. PROCEEDINGS OF SPIE. Munich, Germany: 2013. p. 88020Q- 1 (88020Q-6 p.)ISBN: 978-0-8194-9651- 5.
SLÁVIK, V.; KOLÁŘ, R.; PODLIPNÁ, P. Laboratorní úlohy pro výuku lékařské diagnostické techniky. In Trendy v biomedicínskom inžinierstve 2013 - Zborník konferencie. Košice: Technická univerzita v Košiciach, 2013. p. 27-29. ISBN: 978-80-8086-208- 4.
KOLÁŘ, R.; TORNOW, R.; LAEMMER, R.; ODSTRČILÍK, J.; GAZÁREK, J.; JAN, J.; KUBĚNA, T.; ČERNOŠEK, P.; MAYER, M. Analysis of Visual Appearance of Retinal Nerve Fibers in High Resolution Fundus Images: A Study on Normal Subjects. Computational and Mathematical Methods in Medicine (Print), 2013, vol. 2013, no. 12, p. 1-10. ISSN: 1748- 670X.
ODSTRČILÍK, J.; KOLÁŘ, R.; TORNOW, R.; BUDAI, A.; JAN, J.; MACKOVÁ, P.; VODÁKOVÁ, M. Analysis of the retinal nerve fiber layer texture related to the thickness measured by optical coherence tomography. In Computational Vision and Medical Image Processing IV. 4. London: Taylor & Francis Group, 2013. p. 105-110. ISBN: 978-1-138-00081- 0.
KOLÁŘ, R.; HARABIŠ, V.; ODSTRČILÍK, J. Hybrid retinal image registration using phase correlation. IMAGING SCIENCE JOURNAL, 2013, vol. 61, no. 4, p. 269-384. ISSN: 1368- 2199.
KOLÁŘ, R.; ODSTRČILÍK, J.; MACKOVÁ, P.; LAEMMER, R. Registration of the long- term autofluorescence retinal images taken from glaucomatic patients. In Computational Vision and Medical Image Processing. London: Taylor & Francis, 2013. p. 115-119. ISBN: 978-1-138-00081- 0.
MACKOVÁ, P.; KOLÁŘ, R.; ODSTRČILÍK, J. Analýza geometrického zkreslení multimodálních obrazových dat sítnice. Elektrorevue - Internetový časopis (http://www.elektrorevue.cz), 2013, vol. 15, no. 5, p. 315-321. ISSN: 1213- 1539.
JIŘÍK, R.; NYLUND, K.; GILJA, O.; MÉZL, M.; HARABIŠ, V.; KOLÁŘ, R.; STANDARA, M.; TAXT, T. Ultrasound perfusion analysis combining bolus-tracking and burst- replenishment. IEEE Transactions on Ultrasonocs, Ferroelectrics, and Frequency Control, 2013, vol. 60, no. 2, p. 310-319. ISSN: 0885- 3010.
ODSTRČILÍK, J.; KOLÁŘ, R.; JAN, J.; MACKOVÁ, P. Analýza obrazových dat sítnice pro podporu diagnostiky glaukomu. In Nové směry v biomedicínském inženýrství. 2013. Brno, ČR: Společnost elektrotechnického inženýrství, 2013. p. 81-92. ISBN: 978-80-214-4814- 8.
SLÁVIK, V.; KOLÁŘ, R.; HARABIŠ, V.; JIŘÍK, R. Rician inverse Gaussian model of scattering in ultrasound contrast media. In 2013 IEEE International Ultrasonics Symposium Proceedings. 2013. p. 318-321. ISBN: 978-1-4673-5684- 8.
ODSTRČILÍK, J.; KOLÁŘ, R.; JAN, J.; GAZÁREK, J.; KUNA, Z.; VODÁKOVÁ, M. Analysis of retinal nerve fiber layer via Markov random fields in color fundus images. In Proceedings of 19th International Conference on Systems, Signals and Image Processing (IEEE - IWSSIP 2012). Vídeň, Rakousko: TU Wien, 2012. p. 504-507. ISBN: 978-1-4577-2191- 5.
PODLIPNÁ, P.; KOLÁŘ, R. Concentration influence on contrast agents properties in optical coherence tomography. In Student EEICT Proceedings of the 18th conference, Volume 3. 2012. p. 350-354. ISBN: 978-80-214-4462- 1.
KOLÁŘ, R.; JIŘÍK, R.; HARABIŠ, V. Nakagami model of scattering in ultrasound contrast media. In Proceedings of the IEEE International Ultrasonics Symposium 2012, Dresden. 2012. p. 410-412. ISBN: 978-1-4577-1253- 1.
HARABIŠ, V.; KOLÁŘ, R.; MÉZL, M. Influence of injection speed of contrast agent on perfusion analysis using fast bolus method. In Proceedings of the IEEE International Ultrasonics Symposium 2012, Dresden. 2012. p. 1319-1322. ISBN: 978-1-4577-1253- 1.
JAN, J.; ODSTRČILÍK, J.; GAZÁREK, J.; KOLÁŘ, R. Retinal Image Analysis Aimed at Blood Vessel Tree Segmentation and Early Detection of Neural- Layer Deterioration. COMPUTERIZED MEDICAL IMAGING AND GRAPHICS, 2012, vol. 2012, no. 6, p. 431-441. ISSN: 0895- 6111.
MÉZL, M.; JIŘÍK, R.; BARTOŠ, M.; HARABIŠ, V.; KRATOCHVÍLA, J.; KOLÁŘ, R. Software Package for Dynamic Contrast- Enhanced Ultrasound Imaging. In Abstract Book - 2011 Joint National Ph.D. Conference in Medical Imaging and MedViz Conference. Bergen, Norway: University of Bergen, 2011. p. 120-121. ISBN: 978-82-993786-6- 6.
JAN, J.; KOLÁŘ, R.; KUBEČKA, L.; ODSTRČILÍK, J.; GAZÁREK, J. FUSION BASED ANALYSIS OF OPHTHALMOLOGIC IMAGE DATA. Kybernetika, 2011, vol. 47 (2011), no. 3, p. 455-481. ISSN: 0023- 5954.
BUDAI, A.; ODSTRČILÍK, J.; KOLÁŘ, R.; HORNEGGER, J.; JAN, J.; KUBĚNA, T.; MICHELSON, G. A Public Database for the Evaluation of Fundus Image Segmentation Algorithms. Proc. of the Association for Research in Vision and Ophthalmology conference (ARVO) 2011. ARVO 2011. Fort Lauderdale, Florida, USA: Association for Research in Vision and Ophthalmology, Inc., 2011. p. 1-2.
KUNA, Z.; KOLÁŘ, R. Modelování axiálního a laterálního rozlišení u OCT. In Trendy v biomedicínského inženýrství 2011. sborník konference Trendy v Biomedicínském inženýrství 2011. VŠB - Technická univerzita Ostrava, 2011. p. 32-35. ISBN: 978-80-248-2475- 8.
JAN, J.; KOLÁŘ, R.; KUBEČKA, L.; ODSTRČILÍK, J.; GAZÁREK, J. Ophthalmological Image Processing and Analysis in DAR - a survey. Abstracts of Contributions to 7th Intern. Workshop on Data - Algorithms - Decision making. 1. Praha: UTIA AVČR, 2011. p. 25-25.
HARABIŠ, V.; KOLÁŘ, R.; JIŘÍK, R. Registration of Ultrasound Image Sequences for Perfusion Analysis. In 19th European Signal Processing Conference (EUSIPCO-2011). 18th European Signal Processing Conference (EUSIPCO-2010). EURASIP. Barcelona: EURASIP, 2011. p. 1015-1019. ISBN: 978-3-642-03882- 2. ISSN: 2076- 1465.
KOLÁŘ, R.; ODSTRČILÍK, J.; HARABIŠ, V.; JAN, J. Illumination Correction and Contrast Equalization in Colour Fundus Images. In 19th European Signal Processing Conference (EUSIPCO-2011). 18th European Signal Processing Conference (EUSIPCO-2010). EURASIP. Barcelona: EURASIP, 2011. p. 298-302. ISSN: 2076- 1465.
ODSTRČILÍK, J.; KOLÁŘ, R.; JAN, J.; BUDAI, A. Gold Standard Database to Support Evaluation of Fundus Image Segmentation Methods. Abstracts of Contributions to 7th International Workshop on Data-Algorithms- Decision Making. UTIA. Praha, ČR: UTIA AV ČR, 2011. p. 46-46.
KUNA, Z.; KOLÁŘ, R. Experimentální určení axiálního rozlišení u systému optické koherenční tomografie. Elektrorevue - Internetový časopis (http://www.elektrorevue.cz), 2011, vol. 2011, no. 12, p. 1-4. ISSN: 1213- 1539.
ODSTRČILÍK, J.; KOLÁŘ, R.; HARABIŠ, V.; GAZÁREK, J.; JAN, J. Retinal Nerve Fiber Layer Analysis via Markov Random Fields Texture Modelling. In 18th European Signal Processing Conference (EUSIPCO-2010). 18th European Signal Processing Conference (EUSIPCO-2010). EURASIP. EURASIP, 2010. p. 1650-1654. ISSN: 2076- 1465.
KOLÁŘ, R.; HARABIŠ, V.; JIŘÍK, R. Registration of Ultrasound Contrast Images for Perfusion Analysis. In Proceedings of International Ultrasonics Symposium 2009. 2010. p. 1251-1254. ISBN: 978-1-4244-4390- 1.
KOLÁŘ, R.; ŠIKULA, V.; BAŠE, M. Retinal Image Registration using Local Phase Correlation. In Proceedings of Biosignal 2010: Analysis of Biomedical Signals and Images. 2010. p. 244-252. ISBN: 978-80-214-4106- 4.
KOLÁŘ, R.; TAŠEVSKÝ, P. Registration of 3D Retinal Optical Coherence Tomography Data and 2D Fundus Images. In Biomedical Image registration. Lecture Notes in Computer Science. 2010. p. 72-82. ISSN: 0302- 9743.
HARABIŠ, V.; KOLÁŘ, R.; JIŘÍK, R.; MÉZL, M. Perfusion Curves Modelling For Evaluating Of Ultrasound Image Registration. In Proceedings of Biosignal 2010: Analysis of Biomedical Signals and Images. Analysis of Biomedical Signals and Images. Brno University of Technology, 2010. p. 333-340. ISBN: 978-80-214-4106- 4. ISSN: 1211- 412X.
KOLÁŘ, R.; JIŘÍK, R.; HARABIŠ, V.; MÉZL, M.; BARTOŠ, M. Advanced Methods for Perfusion Analysis in Echocardiography. Physiological Research, 2010, vol. 59, no. S1, p. S33 (S41 p.)ISSN: 1802- 9973.
MÉZL, M.; JIŘÍK, R.; HARABIŠ, V.; KOLÁŘ, R. Quantitative Ultrasound Perfusion Analysis In Vitro. In Proceedings of Biosignal 2010: Analysis of Biomedical Signals and Images. Analysis of Biomedical Signals and Images. Brno University of Technology, 2010. p. 279-283. ISBN: 978-80-214-4106- 4. ISSN: 1211- 412X.
KOLÁŘ, R.; JIŘÍK, R.; HARABIŠ, V.; MÉZL, M.; BARTOŠ, M. Advanced Methods for Perfusion Analysis in Echocardiography. Physiological Research, 2010, vol. 59, no. Suppl 1, p. S33 (S41 p.)ISSN: 0862- 8408.
KUBEČKA, L.; JAN, J.; KOLÁŘ, R. Retrospective Illumination Correction of Retinal Images. International Journal of Biomedical Imaging, 2010, vol. 2010, no. 5, p. 201-223. ISSN: 1687- 4188.
GAZÁREK, J.; JAN, J.; KOLÁŘ, R.; ODSTRČILÍK, J. Bimodal Comparison of Retinal Nerve Fibre Layer Thickness: Fundus Camera versus Optical Coherence Tomography. Abstracts of Contributions to 6th International Workshop on Data-Algorithms- Decision Making. UTIA. Praha, ČR: UTIA AV ČR, 2010. p. 50-50.
ODSTRČILÍK, J.; KOLÁŘ, R.; JAN, J.; GAZÁREK, J. Retinal nerve fiber layer texture analysis via markov random fields. Abstracts of Contributions to 6th International Workshop on Data-Algorithms- Decision Making. UTIA. Praha, ČR: UTIA AV ČR, 2010. p. 49-49.
NOVOTNÝ, A.; ODSTRČILÍK, J.; KOLÁŘ, R.; JAN, J. Texture Analysis Of Nerve Fibre Layer In Retinal Images Via Local Binary Patterns And Gaussian Markov Random Fields. In 20th Biennial International EURASIP Conference BIOSIGNAL 2010. Analysis of Biomedical Signals and Images. EURASIP. Brno: EURASIP, 2010. p. 308-315. ISBN: 978-80-214-4106- 4. ISSN: 1211- 412X.
ODSTRČILÍK, J.; JAN, J.; KOLÁŘ, R.; GAZÁREK, J. Improvement of Vessel Segmentation by Matched Filtering in Colour Retinal Images. In IFMBE Proceedings of World Congress on Medical Physics and Biomedical Engineering. Springer. Springer, 2009. p. 327-330. ISBN: 978-3-642-03897- 6.
KOLÁŘ, R.; JAN, J.; LAEMMER, R.; MARDIN, C. The segmentation of zones with increased autofluorescence in the junctional zone of parapapillary atrophy. PHYSIOLOGICAL MEASUREMENT, 2009, vol. 2009, no. 30, p. 505-516. ISSN: 0967- 3334.
KOLÁŘ, R.; ČERNOŠEK, P.; JAN, J.; KUBĚNA, T. Statistická analýza vrstvy nervových vláken v barevných digitálních snímcích sítnice. Česká a slovenská oftalmologie, 2009, vol. 65, no. 2, p. 53-58. ISSN: 1803- 6597.
KOLÁŘ, R.; HARABIŠ, V. Automatic Rigid Registration and Analysis of Colour Fundus Image in Patients with Diabetic Retinopathy. World Congress on Medical Physics and Biomedical Engineering, September 7 - 12, 2009, Munich, Germany. Springer, 2009. p. 251-254. ISBN: 978-3-642-03881- 5.
ODSTRČILÍK, J.; JAN, J.; KOLÁŘ, R. Vessel Segmentation by Matched Filtering in Colour Retinal Images. Abstracts of Contributions to 5th International Workshop on Data - Algorithms - Decision Making. Ústav teorie informace AV ČR, v.v.i. 2009. p. 48-48.
GAZÁREK, J.; JAN, J.; KOLÁŘ, R. Improvement of Textural Analysis Mathod Aimed to Detection of Neural Fibre Layer Loss in Retinal Images. Abstracts of Contributions to 5th International Workshop on Data - Algorithms - Decision Making. Ústav teorie informace AV ČR, v.v.i. UTIA AV ČR, 2009. p. 41-41.
KOLÁŘ, R.; VÁCHA, P. Texture Analysis of the Retinal Nerve Fiber Layer in Fundus Images via Markov Random Fields. World Congress on Medical Physics and Biomedical Engineering, September 7 - 12, 2009, Munich, Germany. Springer, 2009. p. 247-250. ISBN: 978-3-642-03881- 5.
TAŠEVSKÝ, P.; KOLÁŘ, R. Segmentace cévního řečiště ve fotografiích sítnice s využitím 2D diskrétní vlnkové transformace. Elektrorevue - Internetový časopis (http://www.elektrorevue.cz), 2009, vol. 2009, no. 48, p. 1-4. ISSN: 1213- 1539.
BARTOŠ, M.; JIŘÍK, R.; HARABIŠ, V.; KOLÁŘ, R. Measurement of SonoVue TM Properties for Quantitative Contrast Ultrasonic Imaging. Analysis of Biomedical Signals and Images, 2008, vol. 19, no. 1, p. 22-22. ISSN: 1211- 412X.
KOLÁŘ, R.; JAN, J.; KUBEČKA, L. Registration and Fusion of the Autofluorescent and Infrared Retinal Images. International Journal of Biomedical Imaging, 2008, vol. 2008, no. 513478, p. 1-11. ISSN: 1687- 4188.
KOLÁŘ, R.; JAN, J. Detection of Glaucomatous Eye via Color Fundus Images Using Fractal Dimensions. Radioengineering, 2008, vol. 17, no. 3, p. 109-114. ISSN: 1210- 2512.
GAZÁREK, J.; JAN, J.; KOLÁŘ, R. DETECTION OF NEURAL FIBRE LAYER IN RETINAL IMAGES VIA TEXTURAL ANALYSIS. Analysis of Biomedical Signals and Images, 2008, vol. 2008(19), no. 1, p. 181-187. ISSN: 1211- 412X.
HARABIŠ, V.; KOLÁŘ, R. Automatic Landmark Detection for Retinal Image Registration. Analysis of Biomedical Signals and Images, 2008, vol. 19, no. 1, p. 1-8. ISSN: 1211- 412X.
ODSTRČILÍK, J.; JAN, J.; KOLÁŘ, R. Segmentation of Vessel Structure in Retinal Images by Matched Filtering. Analysis of Biomedical Signals and Images, 2008, vol. 2008(19), no. 1, p. 178-183. ISSN: 1211- 412X.
MALÍNSKÝ, M.; KOLÁŘ, R.; JAN, J. Localization of the Optic Nerve Head in Colour Fundus Images. Analysis of Biomedical Signals and Images, 2008, vol. 19, no. 1, p. 1-7. ISSN: 1211- 412X.
KOLÁŘ, R.; JAN, J.; URBÁNEK, D. Texture Based Discrimination of Normal and Glaucomatous Retina. Analysis of Biomedical Signals and Images, 2008, vol. 19, no. 1, p. 1-5. ISSN: 1211- 412X.
LAEMMER, R.; KOLÁŘ, R.; JAN, J.; MARDIN, C. Impact Of Parapapillary Autofluorescence In Glaucoma: Clinical Aspects. Analysis of Biomedical Signals and Images, 2008, vol. 19, no. 1, p. 1-4. ISSN: 1211- 412X.
KOLÁŘ, R. Detekce výpadku vrstvy nervových vláken v barevných fundus snímcích. Sborník abstrakt - Kongres České glaukomové společnosti. 2008. p. 58-58. ISBN: 978-80-254-1568- 9.
KOLÁŘ, R. Detekce výpadku vrstvy nervových vláken v barevných fundus snímcích. Sborník abstrakt, Kongres České glaukomové společnosti. 2008. p. 58-58. ISBN: 978-80-254-1568- 9.
KOLÁŘ, R.; JAN, J. Analýza barevných snímků, HRT obrazů a autofluorescenčních obrazů pro podporu diagnostiky glaukomu. In Sborník abstrakt - XV. sjezd České oftalmologické společnosti. Brno: ČOS, 2007. p. 173-173. ISBN: 978-80-87086-01- 8.
KOLÁŘ, R.; JAN, J. Vývoj nových metod pro včasnou diagnostiku glaukomu. In Trendy v biomedicínském inženýrství. Kladno: ČVUT v Praze, 2007. p. 212-215. ISBN: 978-80-01-03777- 5.
KOLÁŘ, R.; JAN, J.; JIŘÍK, R. Semiautomatic Detection and Evaluation of Autofluorescent Areas in Retinal Images. In Sborník konference 29th Annual International Conference of the IEEE Engineering in Medicine and Biology Society. 2007. p. 3327-3330.
KOLÁŘ, R. Lékařská diagnostická technika. 2007.
JIŘÍK, R.; JAN, J.; PETERLÍK, I.; HEMZAL, D.; FILIPÍK, A.; ZAČAL, J.; ROLEČEK, J.; KOLÁŘ, R. Ultrasound Transmission Tomography. In Sborník 7. česko- slovenské konference Trendy v biomedicínském inženýrství. Kladno, Česká republika: ČVUT, FBMI, 2007. p. 208-211. ISBN: 978-80-01-03777- 5.
KOLÁŘ, R.; JAN, J. Registration framework for the autofluorescence and infrared images. In Abstracts of Contributions to 3rd International Workshop DAR. Praha: ÚTIA AV ČR, 2007. p. 18-18.
KOLÁŘ, R.; JAN, J. Texture Analysis of Retinal Nerve Fiber Layer in Color Fundus Images. In Abstracts of Contributions to 3rd International Workshop DAR. Praha: ÚTIA AV ČR, 2007. p. 50-50.
Judinyová,K. Modelling of the Visual System. In Proceedings of the 13th Conference STUDENT EEICT 2007. Volume 1. Brno: VUT v Brně, 2007. p. 110 ( p.)ISBN: 978-80-214-3407- 3.
Zacal J, Hemzal D, Jan J, Filipik A, Jirik R, Kolar R. Comparison of Wave-Equation Versus Measurement- Processing Transducer Calibration for Ultrasonic Transmission Tomography. In Proceedings of 28th Annual International Conference IEEE EMBS. New York (USA): 2006. p. 2754 ( p.)ISBN: 14244-0033- 3.
KOLÁŘ R., JAN J., KUBEČKA L. Computer support for early glaucoma diagnosis based on the fused retinal images. Scripta medica, 2006, vol. 2006, no. 79, p. 249-259. ISSN: 1211- 3395.
Zacal J., Jan J., Kolar R. Image Data Registration as a Means to 3D Ultrasonic Data Positioning. In Analysis of Biomedical Signals and Images - Proceedings of 18th Biennial International EURASIP Conference BIOSIGNAL 2006. 18th EURASIP intern. biennial conference BIOSIGNAL 2006. Brno: VUTIUM PRESS, 2006. p. 318 ( p.)ISBN: 80-214-3152- 0.
Kolář R, Kubečka L, Flusser J, Jan J, Jiřík R. Noise Suppression In Retinal Autofluorescence Images. In Analysis of Biomedical Signals and Images. Brno: VUTIUM Press, 2006. p. 302 ( p.)ISBN: 80-214-3152- 0.
Kolář R, Kubečka L, Jan J, Jiřík R. Image Improvement in Confocal Scanning Laser Ophthalmoscopy. In Analysis of Biomedical Signals and Images. Brno: VUTIUM Press, 2006. p. 239 ( p.)ISBN: 80-214-3152- 0.
Kolář R, Jiřík R, Začal J, Jonáková M, Jan J. 3D Ultrasound Point Spread Function Measurement and Evaluation. In Analysis of Biomedical Signals and Images. Brno: VUTIUM Press, 2006. p. 305 ( p.)ISBN: 80-214-3152- 0.
KUBEČKA, L.; JAN, J.; KOLÁŘ, R.; JIŘÍK, R. Elastic Registration for Auto- fluorescence Image Averaging. In Proc. 28th IEEE/EMBS Ann.Intern. Conf. 2006. New York: IEEE, 2006. p. 1948 ( p.)ISBN: 1-4244-0033- 3.
JIŘÍK, R.; PETERLÍK, I.; ZAČAL, J.; JAN, J.; RUITER, N.; STOTZKA, R.; KOLÁŘ, R.; KUBEČKA, L. Attenuation Imaging in Ultrasound Transmission Tomography. In Proceedings of 18th Int. EURASIP Conf. BIOSIGNAL 2006. Brno, Česká republika: VUTIUM Press, 2006. p. 233 ( p.)ISBN: 80-214-3152- 0.
VALLA, M.; KOLÁŘ, R. Fraktály v obrezech. In Proceedings of the 12th Conference STUDENT EEICT 2006. Brno: VUT v Brně, 2006. p. 95-97. ISBN: 80-214-3160- 1.
Kolář Radim, Jiří Jan. Tissue Models and Speckle Reduction in Medical Ultrasound Images. In Image Analysis. Lecture Notes in Computer Science. Springer. Lecture Notes in Computer Science, 2005. p. 1017-1026. ISBN: 3-540-26320- 9. ISSN: 0302- 9743.
Kolář, R. Jan, J. Chaloupka, V. ULTRASOUND TISSUE CHARACTERIZATION USING NAKAGAMI MODEL WITH TEMPORAL AVERAGING. In IFMBE Proceedings - EMBEC 2005. IFMBE. Praha: IFMBE, 2005. p. 616-620.
Kolář, R. Jan, J. Chrástek, R. Laemmer, R. Mardin, Ch.Y. AUTOFLUORESCENCE AREAS DETECTION IN HRA IMAGES. In IFMBE Proceedings. Praha: IFMBE, 2005. p. 2384-2388.
KOLÁŘ, R.,KUBEČKA, L., JAN, J. CHRÁSTEK, R. DISPARITY ESTIMATION IN UNCALIBRATED STEREO RETINAL IMAGES. In IFMBE Proceedings. Praha: IFMBE, 2005. p. 555-559.
KOLÁŘ, R., JIŘÍK, R. Nakagami- m Distribution In Echocardiography. In Analysis of Biomedical Signals and Images. Brno: Brno University of Technology, 2004. p. 343 ( p.)ISBN: 80-214-2633- 0.
KOLÁŘ, R., JIŘÍK, R., JAN, J. Estimator Comparison of the Nakagami- m Parameter and its Application in Echocardiography. Radioengineering, 2004, vol. 13, no. 1, p. 8-12. ISSN: 1210- 2512.
KOLÁŘ, R. Surface reconstruction from retinal laser images. In Proceedings of the 26th Annual International Conference of the IEEE EMBS. San Francisco: Engeneering in Medicine and Biology Society, 2004. p. 1233 ( p.)ISBN: 0-7803-8439- 3.
KOLÁŘ, R., KUBEČKA, L. Processing and Visualization of Retina Laser Images. In IWSSIP´ 04 ambient multimedia. Poznaň, Polsko: Polish Society for Theoretical and Applied Electrical Engineering, 2004. p. 403 ( p.)ISBN: 83-906074-8- 4.
KOLÁŘ, R., FEDRA, P., ROHEL, J., KUREČKA, R., JAN, J., CHALOUPKA, V. 3D interpolation for ultrasound volume reconstruction. In Proceedings of Radioelektronika 2003. Brno: Brno University of Technology, 2003. p. 119 ( p.)ISBN: 80-214-2383- 8.
KOLÁŘ, R., JAN, J. 3D imaging of retina laser images with Visualization Toolkit. In Proceedings of Radioelektronika 2003. VUTIUM BRNO. Brno: Brno University of Technology, 2003. p. 123 ( p.)ISBN: 80-214-2383- 8.
KOLÁŘ, R., JAN, J. VISUALIZATION OF THE RETINA LASER IMAGES IN MATLAB. In Proceedings of Matlab 2003. Praha: Humusoft s.r.o., 2003. p. 306 ( p.)ISBN: 80-7080-526- 9.
KOLÁŘ, R., KOZUMPLÍK, J. Wavelet Packet Transform in Raw Ultrasound Signal Processing. Journal of Electrical Engineering, 2003, vol. 54, no. 1- 2, p. 42 ( p.)ISSN: 1335- 3632.
ZADRAŽIL, M., KOZUMPLÍK, J., KOLÁŘ, R. Denoising of ECG Signal with Real and Complex Wavelets. In Elektrotechnika a informatika 2002. Zapadočeská univerzita v Plzni: Zapadočeská univerzita v Plzni, 2002. p. 329 ( p.)ISBN: 80-7082-904- 4.
KOLÁŘ, R., KOZUMPLÍK, J. Speckle suppression and contrast enhancement in ultrasound images. In Analysis of biomedical signals and images. Brno: VUTIUM Press, 2002. p. 353 ( p.)ISBN: 80-214-2120- 7.
KOLÁŘ, R., KOZUMPLÍK, J. Komplexní vlnková transformace a filtrace obrazů. In Matlab 2002. Humusoft s.r.o. Praha: Humusoft, s.r.o., 2002. p. 252 ( p.)ISBN: 80-7080-500- 5.
KOZUMPLÍK, J., KOLÁŘ, R. Wavelet Denoising of Electrocardiograms. In Analysis of Biomedical Signals and Images. Brno: Vutium Press, 2002. p. 220 ( p.)ISBN: 80-214-2120- 7.
KOLÁŘ, R., KOZUMPLÍK, J. Noise suppression in ultrasound images in packet wavelet transform. In Radioelektronika 2002. Bratislava: 2002. p. 210 ( p.)ISBN: 80-227-1700- 2.
KOLÁŘ, R., KOZUMPLÍK, J. Fuzzy approach in ultrasound image segmentation. In Computational Intelligence, Theory and Applications. Lecture Notes in Computer Science 2206. Springer- Verlag Berlin Heidelberg: Springer- Verlag Berlin Heidelberg, 2001. p. 924 ( p.)ISBN: 3-540-42732- 5.
KOLÁŘ, R., KOZUMPLÍK, J. Denoising with real and complex wavelets. In DSP- MCOM 2001. Košice, Slovenská republika: Mercury Smékal Publishing House, 2001. p. 11 ( p.)ISBN: 80-89061-49- 4.
KOLÁŘ, R., KOZUMPLÍK, J. FILTRACE SIGNÁLŮ POMOCÍ KOMPLEXNÍ VLNKOVÉ TRANSFORMACE. In Matlab 2001. Praha: Humusoft, 2001. p. 164 ( p.)ISBN: 80-7080-446- 7.
KOLÁŘ, R. Ultrazvuková charakterizace tkání. 2001.
KOLÁŘ, R., KOZUMPLÍK, J. Adaptive noise suppression in ultrasound images via wavelet transform. In Proceedings of 7th Conference STUDENT FEI 2001. 2. Brno: Vysoké učení technické v Brně, FEI, 2001. p. 234 ( p.)ISBN: 80-214-1861- 5.
KOLÁŘ, R., KOLKA, M., KOZUMPLÍK, J., PROVAZNÍK, I. Wavelet Based Enhancement of Ultrasonic Signals for Edge Detection. In Proceedings of the 11- th International Conference Radioelektronika 2001. Brno: VUT BRNO, 2001. p. 198 ( p.)ISBN: 80-214-1861- 3.
KOLÁŘ, R., KOZUMPLÍK, J. Noise suppression in ultrasound images using wavelets. In Applied Electronics 2001. Plzeň: Západočeská universita, 2001. p. 130 ( p.)ISBN: 80-7082-758- 0.
KOZUMPLÍK, J., KOLÁŘ, R., JAN, J. Číslicové zpracování signálů v prostředí Matlab. Číslicové zpracování signálů v prostředí Matlab. Brno: VUT v Brně, FEI, Ústav biomedicínského inženýrství, 2001. ISBN: 80-214-1964- 4.
HRUBÝ, R., HOLČÍK, J., KOZUMPLÍK, J., KOLÁŘ, R. Wavelet Based Filtering of Myopotentials in Equine ECG. In SYMBIOSIS 2001. Proc. VI. Intern. Conference. Szczyrk, Poland: Szczyrk, Poland, 2001. p. 223 ( p.)ISBN: 121- 829X.
KOLÁŘ, R., KOZUMPLÍK, J. Methods for ultrasound attenuation estimation in tissues. In Analysis of biomedical signals and images. Brno: VUTIUM PRESS, 2000. p. 389 ( p.)ISBN: 80-214-1610- 6.
KOLÁŘ, R., KOZUMPLÍK, J. Wavelet based Wiener denoising with edge enhancement of radiofrequency signal. In Analysis of biomedical signals and images. Brno: VUTIUM PRESS, 2000. p. 392 ( p.)ISBN: 80-214-1610- 6.
KOLÁŘ, R., KOZUMPLÍK, J. Předzpracování ultrazvukových dat pomocí fuzzy entropie. Sborník abstrakt Kongres MEFA 2000. Brno: BVV Brno, 2000.
KOLÁŘ, R., KOZUMPLÍK, J. Optimální prahování ultrazvukových dat s využitím fuzzy entropie. In Matlab 2000. Praha: VŠCHT Praha, 2000. p. 162 ( p.)ISBN: 80-7080-401- 7.
KOLÁŘ, R., KOZUMPLÍK, J. Contrast enhancement of ultrasound images via wavelet transform. In Sborník prací studentů a doktorandů FEI VUT. Brno: FEI VUT Brno, 2000. p. 61 ( p.)ISBN: 80-7204-155- X.
KOLÁŘ, R., KOZUMPLÍK, J. Wavelet based Wiener denoising with edge enhancement of radiofrequency signal. In Radioelektronika 2000. Brno: Vydavateľstvo STU Bratislava, 2000. p. P- 15 ( p.)ISBN: 80-227-1389- 9.

References: V. 
 V. 
 V. 
 V. 
 V. 
 V. 
 V. 
 V.