Source: http://evolution.haifa.ac.il/index.php/people/195-eugene-v-koonin-ph-d
Timestamp: 2019-04-25 12:09:48+00:00

Document:
Koonin EV (2011) The logic of chance: the nature and origin of biological evolution. Upper Saddle River (NJ): FT Press.
Koonin EV, Galperin MY. (2002 )SEQUENCE - EVOLUTION - FUNCTION. Computational Approaches in Comparative Genomics. Kluwer Academic Publishers.
Galperin MY, Koonin EV (Eds). (2002) Computational genomics: from sequence to function. Horizon Press.
Koonin EV. On the origin of cells and viruses: primordial virus world scenario. Ann N Y Acad Sci. 2009 Oct;1178:47-64. PubMed PMID: 19845627.
Koonin EV. The Origin at 150: is a new evolutionary synthesis in sight? Trends Genet. 2009 Nov;25(11):473-5. Epub 2009 Oct 14. PubMed PMID: 19836100; PubMed Central PMCID: PMC2784144.
Koonin EV, Wolf YI, Puigbò P. The Phylogenetic Forest and the Quest for the Elusive Tree of Life. Cold Spring Harb Symp Quant Biol. 2009 Aug 17. [Epub ahead of print] PubMed PMID: 19687142.
Koonin EV, Aravind L. Comparative genomics, evolution and origins of the nuclear envelope and nuclear pore complex. Cell Cycle. 2009 Jul 1;8(13):1984-5.
Shabalina, S. A., and E. V. Koonin. 2008. Origins and evolution of eukaryotic RNA interference. Trends Ecol Evol.
Koonin, E. V. 2007a. Metagenomic sorcery and the expanding protein universe. Nat Biotechnol 25:540-542.
Koonin, E. V. 2007b. Chance and necessity in cellular response to challenge. Mol Syst Biol 3:107.
Koonin, E. V. 2007c. An RNA-making reactor for the origin of life. Proc Natl Acad Sci U S A 104:9105-9106.
Makarova, K. S., and E. V. Koonin. 2007. Evolutionary genomics of lactic acid bacteria. J Bacteriol 189:1199-1208.
Iyer, L. M., S. Balaji, E. V. Koonin, and L. Aravind. 2006. Evolutionary genomics of nucleo-cytoplasmic large DNA viruses. Virus Res 117:156-184.
Koonin, E. V., and V. V. Dolja. 2006. Evolution of complexity in the viral world: the dawn of a new vision. Virus Res 117:1-4.
Koonin, E. V., L. F. Landweber, and D. J. Lipman. 2006. A community experiment with fully open and published peer review. Biol Direct 1:1.
Makarova, K. S., and E. V. Koonin. 2005. Evolutionary and functional genomics of the Archaea. Curr Opin Microbiol 8:586-594.
Novozhilov, A. S., G. P. Karev, and E. V. Koonin. 2006. Biological applications of the theory of birth-and-death processes. Brief Bioinform 7:70-85.
Koonin, E. V., and Y. I. Wolf. 2006. Evolutionary systems biology: links between gene evolution and function. Curr Opin Biotechnol 17:481-487.
Koonin, E. V. 2005a. Orthologs, paralogs, and evolutionary genomics. Annu Rev Genet 39:309-338.
Koonin, E. V. 2005b. Paralogs and mutational robustness linked through transcriptional reprogramming. Bioessays 27:865-868.
Koonin, E. V. 2005c. Virology: Gulliver among the Lilliputians. Curr Biol 15:R167-169.
Koonin, E. V. 2005d. Systemic determinants of gene evolution and function. Mol Syst Biol 1:2005 0021.
Rogozin, I. B., A. V. Sverdlov, V. N. Babenko, and E. V. Koonin. 2005b. Analysis of evolution of exon-intron structure of eukaryotic genes. Brief Bioinform 6:118-134.
Rogozin, I. B., K. S. Makarova, Y. I. Wolf, and E. V. Koonin. 2004. Computational approaches for the analysis of gene neighbourhoods in prokaryotic genomes. Brief Bioinform 5:131-149.

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