Add ezSegmenter example data

#14
by alex-l-kong - opened
Files changed (2) hide show
  1. ark_example.py +9 -0
  2. data/ez_seg_data.zip +3 -0
ark_example.py CHANGED
@@ -67,6 +67,7 @@ _URL_DATA = {
67
  "spatial_lda": "./data/spatial_analysis/spatial_lda.zip",
68
  "post_clustering": "./data/post_clustering.zip",
69
  "ome_tiff": "./data/ome_tiff.zip",
 
70
  }
71
 
72
  _URL_DATASET_CONFIGS = {
@@ -114,6 +115,9 @@ _URL_DATASET_CONFIGS = {
114
  "ome_tiff": {
115
  "ome_tiff": _URL_DATA["ome_tiff"],
116
  },
 
 
 
117
  }
118
 
119
 
@@ -174,6 +178,11 @@ class ArkExample(datasets.GeneratorBasedBuilder):
174
  name="ome_tiff",
175
  version=VERSION,
176
  description="This configuration contains an OME-TIFF format of FOV1. Intended to be used with the OME-TIFF Conversion Notebook."
 
 
 
 
 
177
  )
178
  ]
179
 
 
67
  "spatial_lda": "./data/spatial_analysis/spatial_lda.zip",
68
  "post_clustering": "./data/post_clustering.zip",
69
  "ome_tiff": "./data/ome_tiff.zip",
70
+ "ez_seg_data": "./data/ez_seg_data.zip"
71
  }
72
 
73
  _URL_DATASET_CONFIGS = {
 
115
  "ome_tiff": {
116
  "ome_tiff": _URL_DATA["ome_tiff"],
117
  },
118
+ "ez_seg_data": {
119
+ "ez_seg_data": _URL_DATA["ez_seg_data"]
120
+ }
121
  }
122
 
123
 
 
178
  name="ome_tiff",
179
  version=VERSION,
180
  description="This configuration contains an OME-TIFF format of FOV1. Intended to be used with the OME-TIFF Conversion Notebook."
181
+ ),
182
+ datasets.BuilderConfig(
183
+ name="ez_seg_data",
184
+ version=VERSION,
185
+ description="This configuration contains the data used by the ezSegmenter notebook."
186
  )
187
  ]
188
 
data/ez_seg_data.zip ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:11974d7273681eb39c225e098eb2cb3d055136dcab0267bbf63ecc4e09c1ebe3
3
+ size 14149961