Datasets:
Tasks:
Token Classification
Modalities:
Text
Formats:
parquet
Sub-tasks:
named-entity-recognition
Languages:
English
Size:
1K - 10K
License:
annotations_creators: | |
- expert-generated | |
language_creators: | |
- other | |
languages: | |
- en | |
licenses: | |
- cc-by-4.0 | |
multilinguality: | |
- monolingual | |
pretty_name: 'WIESP2022-NER | |
' | |
size_categories: | |
- 1K<n<10K | |
source_datasets: [] | |
task_categories: | |
- token-classification | |
task_ids: | |
- named-entity-recognition | |
# Dataset for the first Workshop on Information Extraction from Scientific Publications (WIESP/2022) | |
## Dataset Description | |
Datasets are in JSON Lines format (each line is a json dictionary). | |
The datasets are formatted similarly to the CONLL2003 format in that they associate each token with an NER tag. The tags follow the "B-" and "I-" convention from the IOB2 syntax. | |
Each entry consists of a dictionary with the following keys: | |
- `"unique_id"`: a unique identifier for this data sample. Must be included in the predictions. | |
- `"tokens"`: the list of tokens (strings) that form the text of this sample. Must be included in the predictions. | |
- `"ner_tags"`: the list of NER tags (in IOB2 format) | |
The following keys are not strictly needed by the participants: | |
- `"ner_ids"`: the pre-computed list of ids corresponding ner_tags, as given by the dictionary in ner_tags.json | |
- `"label_studio_id"`, `"section"`, `"bibcode"`: references for internal NASA/ADS use. | |
## Instructions for Workshop participants: | |
Predictions must be given in the same JSON Lines format, must include the same `"unique_id"` and `"tokens"` keys from the dataset, as well as the list of predicted NER tags under the `"pred_ner_tags"` key. | |
### How-To | |
How to compute your scores on the training data: | |
1. If not already done, convert your predictions to a Huggingface dataset with the format described above. | |
2. pass the references and predictions datasets to the `compute_MCC()` and `compute_seqeval()` function (from the `.py` files with the same names). | |
How to load the data (assuming `./WIESP2022-NER-DEV.jsonl` is in the current directory, change as needed): | |
- python (as list of dictionaries): | |
``` | |
import json | |
with open("./WIESP2022-NER-DEV.jsonl", 'r') as f: | |
wiesp_dev_json = [json.loads(l) for l in list(f)] | |
``` | |
- into Huggingface (as a Hugginface Dataset): | |
``` | |
from datasets import Dataset | |
wiesp_dev_from_json = Dataset.from_json(path_or_paths="./WIESP2022-NER-DEV.jsonl") | |
``` | |
## File list | |
``` | |
βββ WIESP2022-NER-TRAINING.jsonl : 1753 samples for training. | |
βββ WIESP2022-NER-DEV.jsonl : 20 samples for development. | |
βββ WIESP2022-NER-VALIDATION-NO-LABELS.jsonl : 1366 samples for validation without the NER labels. Used for the WIESP2022 workshop. | |
βββ README.MD: this file. | |
βββ scoring-scripts/ : scripts used to evaluate submissions. | |
βββ compute_MCC.py : computes the Matthews correlation coefficient between two datasets. | |
βββ compute_seqeval.py : computes the seqeval scores (precision, recall, f1 overall and for each class) between two datasets. | |
``` |