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In our training process, we utilized the SAbDab (Structural Antibody Database) to gather high-quality structural data for antibodies and antibody-antigen complexes. The SAbDab database provides a comprehensive and curated collection of antibody structures, which are crucial for developing and validating our computational models.
The structural data and a summary of all available entries can be downloaded from the SAbDab website:
The complete set of antibody structures is available at: https://opig.stats.ox.ac.uk/webapps/newsabdab/sabdab/archive/all/ The summary of all entries can be accessed at: https://opig.stats.ox.ac.uk/webapps/newsabdab/sabdab/summary/all/ However, as the database is regularly updated, only the latest version is currently available for download. For reproducibility of our results, we have included the specific version of the database that we downloaded on March 20, 2023, which can be accessed here.
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