Datasets:
Dataset Viewer
chrom
string | pos
int64 | ref
string | alt
string | label
int64 | CADD
float64 | phyloP-100v
float64 | phyloP-241m
float64 | phastCons-100v
float64 | GPN-MSA
float32 | NT
float64 | NT-v2
float64 | HyenaDNA
float32 | Evo2-1B
float64 | Evo2-7B
float64 | GENERator-1B
float64 | GENERator-3B
float64 | GENERator-v2-1B
float64 | GENERator-v2-3B
float64 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1
| 69,511
|
A
|
G
| 0
| 0.112916
| -0.684
| 3.29
| 0
| -1.493164
| 1.114483
| 1.393293
| -0.000001
| 0.880025
| 0.950002
| -2.103734
| -4.694194
| -2.464122
| -4.204434
|
1
| 953,279
|
T
|
C
| 0
| 0.266107
| 0.037
| 1.27
| 0.009
| -2.578125
| 0.166788
| 0.219609
| -0.000001
| -2.346362
| -3.023306
| -3.418499
| -3.57321
| -2.806085
| -1.923287
|
1
| 973,858
|
G
|
C
| 0
| 0.787153
| -0.431
| 0.835
| 0
| -1.5625
| -1.379893
| -1.074971
| -0.000001
| -1.541645
| -1.217578
| -1.987618
| -1.342503
| -2.81057
| -2.21972
|
1
| 973,929
|
T
|
C
| 0
| 0.818047
| 0.076
| -0.539
| 0.001
| 1.328125
| -0.677588
| -0.765484
| -0.000001
| -1.107392
| 0.307195
| -0.881725
| 1.589459
| -0.955807
| 1.935213
|
1
| 978,953
|
C
|
G
| 0
| -0.096301
| -0.22
| -0.223
| 0
| -1.72168
| 0.446843
| 0.627828
| -0.000002
| 0.078472
| -0.196052
| 0.062324
| -0.664016
| 0.241698
| -3.027441
|
1
| 999,842
|
C
|
A
| 0
| 0.472275
| -0.582
| -1.508
| 0
| 1.387695
| 1.354812
| 1.603472
| -0.000004
| 1.489673
| 1.673976
| 1.476742
| 1.761477
| 1.460643
| 0.940305
|
1
| 1,014,228
|
G
|
A
| 0
| 0.027262
| -0.396
| -0.787
| 0
| 2.003906
| -0.472813
| -0.487897
| -0.000001
| 0.160815
| 2.561068
| 0.759813
| 2.307257
| 0.998826
| 2.711137
|
1
| 1,050,449
|
G
|
A
| 1
| 3.882619
| 5.271
| 6.861
| 1
| 3.966797
| -0.733227
| -0.039148
| -0.000003
| -0.741349
| 2.562749
| 3.369399
| 3.440092
| 3.182607
| 4.26941
|
1
| 1,050,575
|
G
|
C
| 1
| 4.095325
| 9.276
| 8.514
| 1
| 10.625
| 0.442092
| 1.119294
| -0.000002
| 8.492306
| 8.088392
| 7.096515
| 8.412561
| 4.549466
| 8.495306
|
1
| 1,072,052
|
G
|
A
| 0
| -0.862209
| -1.398
| -4.07
| 0
| 0.551758
| -0.007159
| 0.200124
| -0
| 1.638349
| 1.314835
| -0.009253
| 0.616521
| 0.53203
| 1.242721
|
1
| 1,179,288
|
G
|
A
| 0
| 0.167083
| -0.447
| 0.13
| 0
| -0.321289
| -0.599402
| -0.284872
| 0
| 0.16093
| -0.04256
| 0.214205
| 0.211111
| 0.144926
| 0.124804
|
1
| 1,180,851
|
T
|
C
| 0
| 0.21429
| 0.026
| 1.845
| 0
| -1.851563
| -0.915809
| -0.853654
| 0.000001
| -1.408767
| -0.865447
| -1.125332
| -3.128235
| -1.335678
| -3.132108
|
1
| 1,197,558
|
G
|
A
| 0
| 1.409054
| 1.648
| 0.167
| 0.014
| 2.478516
| -0.064281
| -0.298453
| 0.000001
| 0.428551
| 3.288478
| 0.474602
| 1.945681
| -0.099565
| 1.932765
|
1
| 1,211,863
|
A
|
C
| 0
| 0.136844
| -0.141
| 0.007
| 0.002
| 1.439453
| -0.460566
| -0.38898
| 0.000002
| -1.014731
| -1.067841
| -0.971562
| -0.303629
| -0.809525
| 0.542157
|
1
| 1,211,917
|
G
|
A
| 0
| 0.013032
| -0.135
| -0.028
| 0
| 0.191895
| -1.116793
| -0.814173
| -0.000001
| -0.699881
| -0.604482
| -0.826131
| -0.915854
| -0.9316
| -0.957773
|
1
| 1,212,042
|
C
|
T
| 0
| 0.52087
| 0.003
| 3.889
| 0.003
| 3.046875
| 1.02012
| 1.33845
| -0.000001
| 1.427116
| 0.730652
| 2.909132
| 4.036382
| 3.244247
| 4.506484
|
1
| 1,212,898
|
C
|
T
| 0
| 0.438368
| -0.235
| -4.258
| 0
| 0.602051
| 0.936681
| 0.967339
| 0.000001
| 0.297712
| 0.877394
| 0.86279
| 0.877727
| 0.798471
| 0.240011
|
1
| 1,213,738
|
G
|
A
| 1
| 1.622702
| -0.097
| 0.521
| 0
| 2.636719
| -3.576933
| -2.776128
| 0.000001
| 3.098466
| 3.235948
| 3.865761
| 6.660776
| 2.943845
| 5.550689
|
1
| 1,232,279
|
A
|
G
| 1
| 2.298613
| 2.027
| 1.886
| 0.925
| 6.527344
| 2.614562
| 2.104847
| 0.000003
| -1.082471
| -1.225142
| -0.953621
| -1.213547
| -1.04675
| -1.150101
|
1
| 1,232,280
|
T
|
C
| 1
| 2.745302
| 1.175
| 3.189
| 0.99
| 7.273438
| 2.78751
| 4.249384
| 0.000002
| 0.654265
| 0.137923
| -0.233806
| -0.259463
| -0.287814
| -0.97533
|
1
| 1,232,281
|
G
|
A
| 1
| 2.91592
| 4.788
| 7.944
| 1
| 7.144531
| 6.083667
| 6.599987
| -0.000003
| 2.676023
| 2.510659
| 2.195054
| 3.361338
| 2.216887
| 3.114417
|
1
| 1,232,471
|
A
|
G
| 1
| 2.945049
| 2.086
| -0.069
| 0.997
| 4.976563
| -1.568574
| -1.251037
| 0.000004
| 5.657095
| 3.871201
| 3.775857
| 6.414816
| 3.356358
| 7.749705
|
1
| 1,232,478
|
C
|
T
| 1
| 3.931606
| 2.033
| 7.798
| 0.993
| 5.175781
| 0.254544
| 0.152965
| -0
| 5.316516
| 7.922772
| 3.418605
| 7.465944
| 4.013833
| 7.62579
|
1
| 1,232,744
|
G
|
A
| 1
| 4.68026
| 7.4
| 5.604
| 1
| 9.640625
| 2.147749
| 4.378703
| -0.000002
| 9.014827
| 8.530225
| 9.353022
| 10.385287
| 10.022073
| 9.440873
|
1
| 1,232,754
|
C
|
A
| 1
| 4.121125
| 4.766
| 4.804
| 1
| 9.523438
| -0.403674
| -0.090313
| -0.000001
| 9.986548
| 8.469316
| 11.897447
| 11.05778
| 10.714781
| 10.995625
|
1
| 1,232,800
|
G
|
C
| 0
| 0.830179
| 0.466
| -1.097
| 0.998
| 1.115234
| -0.241392
| 0.299638
| -0
| 1.406295
| -2.435487
| 0.93186
| -2.061333
| 1.628216
| -3.510462
|
1
| 1,232,834
|
T
|
C
| 1
| 4.516843
| 3.777
| 3.569
| 1
| 7.078125
| -0.674929
| 0.049767
| 0.000001
| 6.06256
| 5.402861
| 8.332425
| 7.455811
| 6.487652
| 8.123814
|
1
| 1,232,896
|
C
|
G
| 1
| 3.667146
| -0.325
| -0.168
| 0.335
| 7.371094
| 1.320354
| 0.124077
| 0.000001
| 9.68806
| 8.844184
| 10.067963
| 7.391196
| 9.33345
| 9.149853
|
1
| 1,232,897
|
G
|
C
| 1
| 4.542989
| 6.691
| 8.625
| 1
| 9.765625
| 0.316534
| 0.226401
| 0.000001
| 6.385961
| 6.710684
| 11.117711
| 4.073869
| 11.577244
| 5.198335
|
1
| 1,232,927
|
G
|
A
| 1
| 4.493109
| 6.663
| 8.626
| 1
| 8.359375
| 1.302583
| 1.397952
| 0
| 9.257773
| 8.369882
| 7.877469
| 11.644156
| 7.907762
| 10.817743
|
1
| 1,233,044
|
C
|
T
| 1
| 4.400743
| 2.068
| 8.797
| 1
| 8.429688
| 0.71
| 1.273353
| -0.000002
| 7.125057
| 8.12361
| 9.994604
| 7.865199
| 9.516722
| 8.477415
|
1
| 1,233,177
|
G
|
C
| 1
| 4.25814
| 5.541
| 6.948
| 1
| 7.246094
| 0.185643
| 0.282621
| 0.000001
| 8.733045
| 8.942963
| 10.721902
| 10.372193
| 10.407218
| 10.594989
|
1
| 1,233,203
|
T
|
A
| 1
| 3.938952
| 5.873
| 4.681
| 1
| 8.8125
| 0.100668
| 0.435977
| 0.000001
| 4.407123
| 4.80202
| 7.855516
| 7.722699
| 7.185287
| 7.938614
|
1
| 1,243,102
|
A
|
G
| 0
| 1.275063
| 2.096
| 5.327
| 0.99
| -5.085938
| -0.512447
| -0.124545
| -0.000002
| -5.207581
| -5.412631
| -4.064004
| -4.452543
| -3.456889
| -3.791168
|
1
| 1,243,545
|
G
|
A
| 0
| 2.557367
| 7.839
| 6.608
| 1
| 7.59375
| -0.030878
| 0.005286
| -0.000002
| 5.087102
| 3.835269
| 5.045162
| 4.009425
| 4.313853
| 5.113281
|
1
| 1,264,812
|
C
|
G
| 0
| 1.274881
| -0.188
| -0.183
| 0.719
| -4.078125
| -5.620465
| -5.10713
| 0.000004
| -4.899762
| -4.480617
| -5.073435
| -5.118485
| -5.172367
| -4.914754
|
1
| 1,285,621
|
A
|
G
| 0
| 1.028294
| -1.673
| -0.04
| 0
| 1.320313
| 1.147077
| 0.891267
| -0.000001
| 0.599462
| 0.5047
| 0.759434
| 0.647841
| 0.734202
| 0.822034
|
1
| 1,288,005
|
G
|
C
| 0
| 0.149565
| -0.07
| 3.204
| 0
| -3.164063
| -0.018501
| -0.284359
| 0
| -0.138358
| -0.988611
| -1.396239
| 0.349527
| -2.297181
| 0.366534
|
1
| 1,291,377
|
G
|
A
| 0
| 0.44613
| -0.087
| 1.21
| 0
| -0.023026
| -0.327314
| -0.069913
| 0.000001
| -0.994252
| 0.949577
| 0.080654
| 0.441156
| 0.570996
| 1.053593
|
1
| 1,291,509
|
G
|
A
| 0
| -0.265035
| -2.719
| -4.19
| 0
| -0.664063
| -0.350508
| -0.493889
| 0.000002
| -0.24153
| -0.23742
| 0.081842
| 0.195433
| 0.108177
| 0.27041
|
1
| 1,312,290
|
C
|
T
| 1
| 3.357409
| 4.362
| 6.917
| 1
| 5.15625
| 0.825046
| 1.394128
| -0.000003
| 6.586631
| 4.477839
| 5.164829
| 7.501661
| 5.188582
| 7.713781
|
1
| 1,312,841
|
G
|
A
| 1
| 3.542766
| 8.924
| 6.83
| 1
| 7.707031
| -0.448924
| -0.461589
| -0.000001
| 6.908124
| 8.664447
| 6.872846
| 8.371835
| 8.306841
| 8.752136
|
1
| 1,319,063
|
G
|
A
| 0
| -0.448394
| -2.002
| -0.861
| 0
| 0.026367
| -0.890529
| -1.033995
| -0
| -0.978653
| -1.342944
| -1.271198
| -1.183078
| -1.294907
| -1.142682
|
1
| 1,319,313
|
G
|
A
| 1
| 3.038115
| 5.687
| 5.669
| 1
| 6.453125
| -1.08997
| -0.566105
| -0.000002
| 0.483856
| 8.279447
| 9.053868
| 6.297344
| 9.460393
| 7.595786
|
1
| 1,320,493
|
C
|
T
| 1
| 2.847095
| 7.635
| 8.743
| 1
| 7.183594
| 0.449967
| 0.386436
| 0.000002
| 7.096752
| 5.866085
| 6.468287
| 7.497093
| 6.325383
| 7.595631
|
1
| 1,321,072
|
C
|
A
| 1
| 4.400157
| 7.661
| 8.745
| 1
| 13.140625
| 0.901826
| 1.546521
| 0.000002
| 9.704061
| 9.426192
| 12.482918
| 12.498029
| 11.469368
| 14.537199
|
1
| 1,332,271
|
G
|
A
| 0
| -0.611933
| -2.457
| -4.275
| 0
| 0.956543
| -0.347125
| 0.333813
| -0.000001
| 0.412845
| -0.956438
| 0.288829
| 0.398478
| -0.575478
| 1.136124
|
1
| 1,334,108
|
G
|
A
| 0
| 0.004351
| 0.198
| -1.406
| 0
| 0.147461
| 0.245661
| 0.639152
| 0
| 0.94642
| 1.773067
| 2.281472
| 2.323771
| 2.180348
| 2.989002
|
1
| 1,420,203
|
C
|
A
| 0
| 2.239272
| -1.246
| 0.527
| 0
| 1.3125
| 5.897786
| 6.493897
| 0
| 3.472208
| 5.874359
| 5.772686
| 5.715295
| 5.844466
| 5.060192
|
1
| 1,426,261
|
C
|
T
| 0
| 0.466194
| -0.724
| 0.952
| 0
| -1.09375
| 0.458846
| 0.131728
| -0.000002
| -0.273889
| 0.338024
| -0.071215
| 0.116793
| -0.205806
| -0.01767
|
1
| 1,452,384
|
G
|
A
| 0
| 4.322648
| 8.17
| 8.528
| 1
| 4.957031
| 0.778354
| 1.76455
| -0.000001
| 1.575361
| 0.831984
| 1.371539
| 1.073312
| 1.215709
| 0.664846
|
1
| 1,495,605
|
C
|
T
| 0
| 0.735766
| -0.688
| -0.039
| 0
| 1.003906
| 1.712257
| 1.394565
| 0.000004
| 1.548207
| -1.411871
| 3.410594
| 3.454452
| 3.274155
| 3.480411
|
1
| 1,512,312
|
G
|
A
| 0
| 2.55411
| 3.349
| 8.396
| 0.999
| 5.585938
| 0.11172
| 1.031308
| -0.000001
| 2.35595
| 5.142383
| 5.40859
| 4.993903
| 5.457211
| 5.280863
|
1
| 1,516,036
|
T
|
G
| 1
| 3.368562
| 6.341
| 6.275
| 0.992
| 8.304688
| 0.381042
| -0.157784
| -0.000003
| 1.677646
| 7.140017
| 7.826275
| 8.899448
| 6.730504
| 8.666338
|
1
| 1,517,186
|
G
|
A
| 0
| 0.71163
| 1.385
| 2.202
| 0.011
| 1.466797
| 1.941974
| 1.774432
| -0.000002
| 1.571561
| 1.588663
| -2.733496
| -2.925762
| -2.848479
| -2.858245
|
1
| 1,525,242
|
T
|
G
| 1
| 3.512934
| 6.29
| 6.135
| 1
| 10.109375
| -1.569041
| -0.19958
| -0.000003
| 0.940007
| 3.733331
| 6.771811
| 6.223802
| 6.593787
| 6.826197
|
1
| 1,535,616
|
G
|
A
| 1
| 4.118985
| 2.772
| 6.783
| 1
| 8.273438
| 0.493152
| 0.674624
| 0.000001
| 1.61548
| 6.885662
| 3.698006
| 8.68541
| 3.695288
| 8.149363
|
1
| 1,535,723
|
G
|
A
| 1
| 3.741044
| 5.617
| 8.586
| 1
| 6.683594
| -0.525569
| -1.075023
| -0
| 3.972297
| 6.742636
| 9.131591
| 8.757953
| 8.595263
| 11.299488
|
1
| 1,616,547
|
T
|
C
| 0
| 0.54761
| -0.394
| -0.175
| 0
| -1.503906
| -2.388866
| -1.560078
| 0.000002
| -1.050493
| -0.868663
| -1.482336
| -1.00229
| -1.579914
| -0.895532
|
1
| 1,640,423
|
C
|
T
| 0
| 2.384015
| 5.637
| 3.468
| 0.995
| 4.613281
| 0.965639
| 0.690363
| -0
| 5.405758
| 5.725149
| 6.238232
| 5.686343
| 7.311368
| 5.608354
|
1
| 1,641,819
|
C
|
T
| 0
| 0.617502
| 0.039
| -0.278
| 0.987
| -0.884766
| -1.752486
| -1.860513
| 0.000004
| -1.299283
| -1.048271
| 0.675008
| 3.246334
| 0.566108
| 3.473423
|
1
| 1,668,373
|
C
|
T
| 0
| 1.409952
| 3.753
| 2.372
| 0.998
| 3.203125
| -0.303669
| -0.171759
| 0.000001
| 5.301667
| 3.29024
| 5.273205
| 3.54248
| 4.348873
| 2.975427
|
1
| 1,668,449
|
A
|
G
| 0
| -0.356083
| -0.521
| -3.961
| 0.048
| -0.150391
| -0.13061
| -0.076163
| -0.000001
| -0.582891
| -0.61123
| 0.125852
| 0.594709
| 0.231431
| 0.178945
|
1
| 1,707,486
|
C
|
T
| 0
| 1.558467
| 3.757
| 6.882
| 0.998
| 2.923828
| 1.594161
| 1.675307
| -0
| 1.278774
| 5.469384
| 4.51382
| 5.157186
| 4.283215
| 5.128084
|
1
| 1,707,555
|
C
|
T
| 0
| 2.087687
| 4.923
| 3.468
| 0.984
| 3.8125
| 1.061883
| 0.652915
| -0
| 5.023389
| 5.071245
| 5.180477
| 6.228792
| 5.243701
| 5.142193
|
1
| 1,719,406
|
G
|
A
| 0
| 4.246027
| 6.251
| 5.87
| 1
| 1.825195
| -0.534589
| -0.3699
| 0.000003
| 0.071974
| -0.482655
| 3.128936
| 1.731082
| 3.046178
| 2.803921
|
1
| 1,754,601
|
G
|
T
| 0
| -0.4479
| -1.13
| -6.418
| 0.005
| 6.25
| 2.020501
| 1.110811
| -0.000002
| 0.983163
| 4.010463
| 5.777875
| 4.983862
| 4.855288
| 6.485612
|
1
| 1,804,496
|
T
|
C
| 1
| 4.523403
| 7.839
| 6.134
| 1
| 11.46875
| 1.821613
| 4.341127
| 0.000002
| 5.362856
| 7.370704
| 13.227619
| 10.90129
| 14.739583
| 11.461182
|
1
| 1,804,497
|
C
|
A
| 1
| 4.21045
| 7.729
| 8.579
| 1
| 12.976563
| 2.483841
| 5.962761
| -0
| 7.133025
| 8.987746
| 16.853919
| 12.994359
| 18.659209
| 13.430751
|
1
| 1,804,502
|
C
|
A
| 1
| 3.918063
| 7.729
| 8.579
| 1
| 12.234375
| -0.686745
| 2.546938
| 0.000001
| 8.203038
| 8.515836
| 14.425808
| 12.087279
| 16.10641
| 13.870892
|
1
| 1,804,508
|
C
|
T
| 1
| 3.913554
| 7.729
| 8.579
| 1
| 12.179688
| 1.870025
| 3.712016
| -0.000001
| 5.516893
| 8.750956
| 11.417975
| 9.893018
| 10.747685
| 11.168369
|
1
| 1,804,562
|
C
|
A
| 1
| 3.636235
| 7.729
| 8.579
| 1
| 12.109375
| 1.033292
| 1.649601
| 0.000004
| 9.921362
| 9.487187
| 14.24494
| 11.585497
| 13.124015
| 11.907767
|
1
| 1,806,503
|
A
|
T
| 1
| 4.256918
| 9.083
| 5.836
| 1
| 13.328125
| 0.426885
| 0.263809
| 0.000001
| 9.7982
| 9.519138
| 12.522183
| 13.47315
| 13.037601
| 13.844513
|
1
| 1,806,512
|
C
|
A
| 1
| 3.826645
| 7.706
| 8.186
| 1
| 13.140625
| 2.726112
| 2.310472
| 0.000001
| 9.600264
| 8.987746
| 16.320407
| 12.596434
| 15.134084
| 13.583246
|
1
| 1,806,513
|
C
|
A
| 1
| 4.119774
| 7.706
| 8.186
| 1
| 12.445313
| 2.286345
| -0.663415
| -0.000003
| 8.530225
| 8.845664
| 13.063226
| 10.637304
| 12.680113
| 10.869285
|
1
| 1,806,514
|
A
|
T
| 1
| 3.207073
| 2.553
| -1.389
| 1
| 9.609375
| 2.066875
| 2.518185
| -0
| 9.046723
| 8.532066
| 13.651877
| 11.124712
| 12.070015
| 10.546722
|
1
| 1,806,515
|
T
|
C
| 1
| 4.491082
| 7.815
| 5.859
| 1
| 11.578125
| 3.729162
| 4.305667
| 0.000001
| 8.921301
| 8.063851
| 12.797464
| 11.192427
| 12.523984
| 12.027575
|
1
| 1,815,796
|
G
|
C
| 1
| 1.810245
| -0.022
| 0.045
| 0.933
| 8.492188
| 0.129889
| 0.150908
| -0.000002
| 4.575043
| 8.139518
| 12.744521
| 8.933823
| 10.626151
| 10.952718
|
1
| 1,916,540
|
T
|
C
| 0
| 1.204282
| -0.175
| -1.396
| 0
| -2.607422
| -1.156277
| -1.685189
| 0
| -5.322034
| -5.989702
| -5.261201
| -7.359232
| -5.373526
| -6.650831
|
1
| 1,918,090
|
A
|
G
| 0
| 0.828084
| 1.22
| 0.809
| 0.013
| 3.164063
| 0.653571
| 0.434833
| -0.000001
| 1.469493
| 3.368572
| 2.147663
| 4.615465
| 3.810565
| 4.863924
|
1
| 1,918,091
|
T
|
C
| 0
| 0.067017
| -0.082
| -0.16
| 0.001
| 2.382813
| -0.823844
| -0.971521
| -0.000001
| 0.170221
| 2.232852
| 3.770611
| 4.006744
| 3.056837
| 4.361003
|
1
| 1,918,484
|
C
|
A
| 0
| 0.529345
| -0.094
| -0.465
| 0.014
| 2.439453
| 0.745362
| 0.920779
| -0.000001
| 1.5949
| 1.318548
| 1.276761
| 5.03856
| 1.617617
| 4.373536
|
1
| 1,923,107
|
C
|
T
| 0
| 2.031239
| 0.55
| 5.883
| 0.438
| 3.990234
| 0.194937
| 0.242315
| -0.000003
| 2.3892
| 5.47671
| 3.979481
| 6.004083
| 3.529667
| 5.201937
|
1
| 1,923,833
|
C
|
G
| 1
| 3.512015
| 2.846
| 8.659
| 1
| 7.753906
| -0.196059
| 0.020362
| 0
| 5.735404
| 5.990971
| 6.877297
| 6.706469
| 5.194876
| 6.077383
|
1
| 1,927,024
|
C
|
T
| 1
| 0.783969
| 0.382
| 0.03
| 0
| 1.996094
| 0.378825
| 0.270885
| 0.000002
| 1.096279
| 2.139229
| 3.595587
| 2.430351
| 3.766405
| 1.018811
|
1
| 1,927,692
|
C
|
T
| 0
| -1.649318
| -3.588
| -5.924
| 0
| -0.583008
| -0.025471
| 0.046523
| -0
| 0.641412
| -0.504747
| 0.198315
| 1.137317
| -0.105217
| 0.758907
|
1
| 1,927,737
|
T
|
C
| 0
| 0.435867
| -0.144
| 3.951
| 0
| -1.25293
| -0.551825
| -0.595555
| 0
| -0.61533
| -0.898816
| -1.002217
| -0.132375
| -0.776046
| -2.621941
|
1
| 1,930,143
|
C
|
T
| 0
| 3.552757
| 3.98
| 6.968
| 1
| 6.273438
| 0.25559
| 0.545018
| -0.000002
| 5.057544
| 6.089229
| 3.504193
| 6.471041
| 6.050732
| 5.810993
|
1
| 1,942,086
|
T
|
C
| 0
| 1.532497
| 2.516
| 1.494
| 0.999
| -3.904297
| -0.125047
| -0.336852
| 0
| -2.138956
| 1.322391
| -5.997955
| -2.457267
| -5.342058
| -1.975613
|
1
| 1,944,419
|
C
|
G
| 0
| 2.364683
| 1.874
| 4.094
| 0.939
| 7.394531
| -0.410565
| -0.383748
| -0.000004
| 4.469774
| 4.34293
| 6.236044
| 6.269704
| 5.755176
| 6.10647
|
1
| 1,968,793
|
T
|
C
| 0
| -0.478732
| 0.054
| 0.904
| 0.001
| -2.328125
| 0.331844
| 0.760876
| -0
| 0.693147
| 0.276094
| -1.694331
| -0.408094
| -1.776515
| -0.537003
|
1
| 1,970,722
|
C
|
T
| 1
| 3.017338
| 3.879
| 8.484
| 0.98
| 6.839844
| -0.757549
| -0.503136
| -0
| -0.591364
| -3.304095
| 4.59937
| 3.922136
| 4.443548
| 2.947781
|
1
| 1,974,047
|
G
|
A
| 1
| 0.650387
| -1.589
| -0.894
| 0
| 0.416016
| 1.782265
| 0.490918
| -0
| 0.047402
| 2.128431
| 4.841298
| 2.747596
| 4.379221
| 1.032501
|
1
| 2,025,598
|
T
|
C
| 0
| 1.082832
| -1.217
| 0.193
| 0
| -3.611328
| -3.545675
| -3.586224
| 0.000001
| -3.741761
| -3.490737
| -4.20991
| -4.325091
| -3.763447
| -3.886728
|
1
| 2,029,197
|
C
|
G
| 1
| 3.146233
| 2.655
| 5.777
| 1
| 9.546875
| -0.056515
| 4.209748
| -0.000006
| 7.777823
| 8.238629
| 9.081068
| 7.677629
| 8.121512
| 7.423055
|
1
| 2,029,235
|
C
|
T
| 0
| 0.219853
| -0.476
| -1.463
| 0.112
| 0.580078
| 0.574805
| 3.325427
| -0.000001
| 2.872455
| 3.960751
| 1.841202
| 2.293186
| 3.682693
| 0.81415
|
1
| 2,193,733
|
G
|
A
| 0
| 0.285874
| -0.118
| 0.297
| 0
| 1.341797
| 1.296382
| 1.07931
| -0.000001
| 0.92587
| 2.161359
| 0.987351
| 2.121108
| 0.953787
| 1.873307
|
1
| 2,228,825
|
C
|
T
| 1
| 3.865474
| 6.406
| 5.785
| 1
| 7.746094
| -0.857549
| -0.779931
| -0.000002
| 4.938682
| 4.904568
| 5.901509
| 6.513581
| 6.689042
| 7.955806
|
1
| 2,228,828
|
T
|
G
| 1
| 3.488515
| 4.895
| 3.829
| 1
| 10.546875
| 1.431248
| 1.491518
| 0.000001
| 8.872511
| 7.401475
| 11.123493
| 9.920112
| 10.833296
| 8.392279
|
1
| 2,228,848
|
T
|
A
| 1
| 2.8778
| 1.305
| 3.824
| 1
| 7.722656
| -0.34151
| -0.390475
| 0
| 5.647832
| 3.35451
| 11.133122
| 7.351341
| 10.475573
| 7.54264
|
End of preview. Expand
in Data Studio
Updates
[2025-09-09] We have added ClinVar variant effect prediction results to the repository. The evaluation dataset was sourced from SongLab. The benchmark includes comparisons of GENERator against Evo2, NT, NT-v2, HyenaDNA, GPN-MSA, CADD, phyloP, and phastCons.
Abouts
The human reference genome data is sourced from the NCBI website.
We have applied minor formatting adjustments to the dataset to facilitate streamlined data analysis.
How to use
from datasets import load_dataset
datasets = load_dataset("GenerTeam/variant-effect-prediction")
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