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ctheodoris
/
Geneformer
like
155
Fill-Mask
Transformers
PyTorch
Safetensors
ctheodoris/Genecorpus-30M
bert
Inference Endpoints
License:
apache-2.0
Model card
Files
Files and versions
Community
341
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f0b6641
Geneformer
12 contributors
History:
59 commits
Christina Theodoris
Update links including unsorted example lengths file
f0b6641
11 months ago
examples
Update links including unsorted example lengths file
11 months ago
geneformer-12L-30M
Upload 12 layer Geneformer model
11 months ago
geneformer
Add function to create remainder emb for in silico overexpression batch
11 months ago
.gitattributes
1.24 kB
Add gene name : Ensembl ID dictionary
12 months ago
.gitignore
3.08 kB
Add gitignore file
12 months ago
MANIFEST.in
127 Bytes
Fixes to stats and adding gene dict attempt number 2 (#13)
12 months ago
README.md
5.24 kB
Update model card for 12 layer Geneformer model
11 months ago
config.json
565 Bytes
upload Geneformer 6L-30M config
about 2 years ago
pytorch_model.bin
pickle
Detected Pickle imports (4)
"collections.OrderedDict"
,
"torch.FloatStorage"
,
"torch._utils._rebuild_tensor_v2"
,
"torch.LongStorage"
What is a pickle import?
41.2 MB
LFS
upload Geneformer 6L-30M
about 2 years ago
setup.py
637 Bytes
Add setup.py
over 1 year ago
training_args.bin
pickle
Detected Pickle imports (4)
"transformers.trainer_utils.SchedulerType"
,
"transformers.training_args.TrainingArguments"
,
"torch.device"
,
"transformers.trainer_utils.IntervalStrategy"
How to fix it?
2.61 kB
LFS
upload training args for Geneformer 6L-30M
about 2 years ago