This is the baseline model used in most experiments in the paper "A Dataset for N-ary Relation Extraction of Drug Combinations".
(for just the domain-adapted masked language model that we use underneath this model, see here)
Steps to load this model
- Download accompanying code:
git clone https://github.com/allenai/drug-combo-extraction.git
conda create --name drug_combo python=3.8.5
conda activate drug_combo
- Download model from Huggingface:
git lfs install
git clone https://huggingface.co/allenai/drug-combo-classifier-pubmedbert-dapt
- Load model (
in Python):
from modeling.model import load_model
checkpoint_path = "drug-combo-classifier-pubmedbert-dapt"
model, tokenizer, metadata = load_model(checkpoint_path)
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