bsc-bio-ehr-es-pharmaconer

This model is a finetuned version of bsc-bio-ehr-es for the pharmaconer dataset used in a benchmark in the paper A comparative analysis of Spanish Clinical encoder-based models on NER and classification tasks. The model has a F1 of 0.904

Please refer to the original publication for more information.

Parameters used

parameter Value
batch size 16
learning rate 4e-05
classifier dropout 0.1
warmup ratio 0
warmup steps 0
weight decay 0
optimizer AdamW
epochs 10
early stopping patience 3

BibTeX entry and citation info

@article{10.1093/jamia/ocae054,
    author = {García Subies, Guillem and Barbero Jiménez, Álvaro and Martínez Fernández, Paloma},
    title = {A comparative analysis of Spanish Clinical encoder-based models on NER and classification tasks},
    journal = {Journal of the American Medical Informatics Association},
    volume = {31},
    number = {9},
    pages = {2137-2146},
    year = {2024},
    month = {03},
    issn = {1527-974X},
    doi = {10.1093/jamia/ocae054},
    url = {https://doi.org/10.1093/jamia/ocae054},
}
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Dataset used to train IIC/bsc-bio-ehr-es-pharmaconer

Collection including IIC/bsc-bio-ehr-es-pharmaconer

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