Training procedure

Metrics:

Train:
({'accuracy': 0.9493701823703696,
  'precision': 0.33008017001294077,
  'recall': 0.9557746202282718,
  'f1': 0.49069654137201724,
  'auc': 0.9524885451874792,
  'mcc': 0.5455384242643763},
Test:
 {'accuracy': 0.9314030701333196,
  'precision': 0.23619250970099098,
  'recall': 0.7766102080254632,
  'f1': 0.36222160719455126,
  'auc': 0.8559979053858663,
  'mcc': 0.4047468233596156})

Framework versions

PEFT 0.5.0

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Inference API

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Collection including AmelieSchreiber/esm2_t12_35M_lora_binding_sites_cp3

ESMBind (ESMB) for Protein Binding Sites

Collection

ESMBind (or ESMB) are LoRA finetuned ESM-2 models for predicting general binding sites and active sites of proteins based on sequence alone. • 14 items • Updated Oct 8, 2023 • 4