Training procedure

Test Metrics:

'eval_loss': 0.45720356702804565,
'eval_accuracy': 0.9392292210730847,
'eval_precision': 0.22106795124992942,
'eval_recall': 0.7627978181868509,
'eval_f1': 0.34279097031908445,
'eval_auc': 0.8528852594008389,
'eval_mcc': 0.3902260284864879

Framework versions

PEFT 0.5.0

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Collection including AmelieSchreiber/esm2_t12_35M_lora_binding_sites_1111K_cp2

ESMBind (ESMB) for Protein Binding Sites

Collection

ESMBind (or ESMB) are LoRA finetuned ESM-2 models for predicting general binding sites and active sites of proteins based on sequence alone. • 14 items • Updated Oct 8, 2023 • 4