File size: 1,010 Bytes
74270b2
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
{
   "config":{
      "model":"multimolecule/splicebert",
      "model_args":"pretrained=multimolecule/splicebert,revision=main,dtype=bfloat16",
      "num_fewshot":0,
      "batch_size":1,
      "batch_sizes":[
         
      ],
      "device":"cpu",
      "no_cache":true,
      "limit":20,
      "bootstrap_iters":100000,
      "description_dict":{"Tokenization":"SNT", "# of Params":"19.7M", "Pretraining Data":"65 billion nucleotides", "Species":"Multi-Species", "Nucleic Acid":"mRNA"},
      "model_dtype":"bfloat16",
      "model_name":"multimolecule/splicebert",
      "model_sha":"main"
   },
   "results":{
      "PolyA":{
         "F1":0.6523
      },
      "LncRNA":{
         "F1":0.7188
      },
      "Chrom Acc":{
         "F1":0.6362
      },
      "Prom Str":{
         "RMSE":0.75
      },
      "Term Str":{
         "RMSE":0.22
      },
      "Splice":{
         "F1":0.9645
      },
      "Gene Exp":{
         "RMSE":14.70
      },
      "Enhancer":{
         "F1":0.6971
      }
   }
}