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# Copyright (c) 2022, salesforce.com, inc.
# All rights reserved.
# SPDX-License-Identifier: BSD-3-Clause
# For full license text, see the LICENSE file in the repo root or https://opensource.org/licenses/BSD-3-Clause
model:
#use_grad_checkpoint: False
#load_finetuned: True
#finetuned: "lavis/output/BLIP2/Pretrain_stage2/20230812160/checkpoint_75.pth"
arch: blip2_protein_mistral
model_type: pretrain_protein_mistral7b
load_pretrained: True
#intialize stage 2 pretraining from stage 1 pretrained model
pretrained: "lavis/output/BLIP2/Pretrain_stage2/20240408161/checkpoint_2.pth"
freeze_vit: True
max_protein_len: 1000
max_txt_len: 150
num_query_token: 32
get_eval: True
esm_size: "3b"
datasets:
GO_protein_function:
text_processor:
train:
name: "blip_caption"
run:
task: captioning
# optimizer
batch_size_train: 1
batch_size_eval: 1
num_workers: 4
max_len: 32
min_len: 1
num_beams: 5
seed: 42
output_dir: "output/BLIP2/protein_eval"
evaluate: True
test_splits: ["test"]
report_metric: False
device: "cuda"
world_size: 1
dist_url: "env://"
distributed: True
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