GLEE/glee/backbone/eva01.py

import logging
import math
from functools import partial

import fvcore.nn.weight_init as weight_init
import torch
import torch.nn as nn
import torch.nn.functional as F
from torch import Tensor, Size
from typing import Union, List
from torch.nn.parameter import Parameter
import numbers

from detectron2.layers import CNNBlockBase, Conv2d, get_norm
from detectron2.modeling.backbone.fpn import _assert_strides_are_log2_contiguous

from fairscale.nn.checkpoint import checkpoint_wrapper
from timm.models.layers import DropPath, Mlp, trunc_normal_

# from detectron2.modeling.backbone import Backbone
from detectron2.modeling import BACKBONE_REGISTRY, Backbone, ShapeSpec

from .eva_01_utils import (
    PatchEmbed,
    add_decomposed_rel_pos,
    get_abs_pos,
    window_partition,
    window_unpartition,
)
from detectron2.modeling.backbone.fpn import LastLevelMaxPool

logger = logging.getLogger(__name__)


__all__ = ["EVAViT", "SimpleFeaturePyramid", "get_vit_lr_decay_rate"]


_shape_t = Union[int, List[int], Size]


# steal from beit https://github.com/microsoft/unilm/tree/master/beit
class LayerNormWithForceFP32(nn.Module):
    __constants__ = ['normalized_shape', 'eps', 'elementwise_affine']
    normalized_shape: _shape_t
    eps: float
    elementwise_affine: bool

    def __init__(self, normalized_shape: _shape_t, eps: float = 1e-5, elementwise_affine: bool = True) -> None:
        super(LayerNormWithForceFP32, self).__init__()
        if isinstance(normalized_shape, numbers.Integral):
            normalized_shape = (normalized_shape,)
        self.normalized_shape = tuple(normalized_shape)
        self.eps = eps
        self.elementwise_affine = elementwise_affine
        if self.elementwise_affine:
            self.weight = Parameter(torch.Tensor(*normalized_shape))
            self.bias = Parameter(torch.Tensor(*normalized_shape))
        else:
            self.register_parameter('weight', None)
            self.register_parameter('bias', None)
        self.reset_parameters()

    def reset_parameters(self) -> None:
        if self.elementwise_affine:
            nn.init.ones_(self.weight)
            nn.init.zeros_(self.bias)

    def forward(self, input: Tensor) -> Tensor:
        return F.layer_norm(
            input.float(), self.normalized_shape, self.weight.float(), self.bias.float(), self.eps).type_as(input)

    def extra_repr(self) -> Tensor:
        return '{normalized_shape}, eps={eps}, ' \
               'elementwise_affine={elementwise_affine}'.format(**self.__dict__)


class Attention(nn.Module):
    """Multi-head Attention block with relative position embeddings."""

    def __init__(
        self,
        dim,
        num_heads=8,
        qkv_bias=True,
        beit_like_qkv_bias=False,
        use_rel_pos=False,
        rel_pos_zero_init=True,
        input_size=None,
        interp_type="vitdet",
    ):
        """
        Args:
            dim (int): Number of input channels.
            num_heads (int): Number of attention heads.
            qkv_bias (bool:  If True, add a learnable bias to query, key, value.
            rel_pos (bool): If True, add relative positional embeddings to the attention map.
            rel_pos_zero_init (bool): If True, zero initialize relative positional parameters.
            input_size (int or None): Input resolution for calculating the relative positional
                parameter size.
        """
        super().__init__()
        self.num_heads = num_heads
        head_dim = dim // num_heads
        self.scale = head_dim**-0.5

        self.beit_like_qkv_bias = beit_like_qkv_bias
        if beit_like_qkv_bias:
            self.q_bias = nn.Parameter(torch.zeros(dim))
            self.v_bias = nn.Parameter(torch.zeros(dim))

        self.qkv = nn.Linear(dim, dim * 3, bias=qkv_bias)
        self.proj = nn.Linear(dim, dim)

        self.use_rel_pos = use_rel_pos
        self.interp_type = interp_type
        if self.use_rel_pos:
            # initialize relative positional embeddings
            self.rel_pos_h = nn.Parameter(torch.zeros(2 * input_size[0] - 1, head_dim))
            self.rel_pos_w = nn.Parameter(torch.zeros(2 * input_size[1] - 1, head_dim))

            if not rel_pos_zero_init:
                trunc_normal_(self.rel_pos_h, std=0.02)
                trunc_normal_(self.rel_pos_w, std=0.02)
        self.qk_float = False

    def forward(self, x):
        B, H, W, _ = x.shape
        # qkv with shape (3, B, nHead, H * W, C)
        if self.beit_like_qkv_bias:
            qkv_bias = torch.cat((self.q_bias, torch.zeros_like(self.v_bias, requires_grad=False), self.v_bias))
            qkv = torch.nn.functional.linear(input=x, weight=self.qkv.weight, bias=qkv_bias)
            qkv = qkv.reshape(B, H * W, 3, self.num_heads, -1).permute(2, 0, 3, 1, 4)
        else:
            qkv = self.qkv(x).reshape(B, H * W, 3, self.num_heads, -1).permute(2, 0, 3, 1, 4)
        # q, k, v with shape (B * nHead, H * W, C)
        q, k, v = qkv.reshape(3, B * self.num_heads, H * W, -1).unbind(0)

        if self.qk_float:
            attn = (q.float() * self.scale) @ k.float().transpose(-2, -1)
            if self.use_rel_pos:
                attn = add_decomposed_rel_pos(attn, q, self.rel_pos_h, self.rel_pos_w, (H, W), (H, W), self.interp_type)
            attn = attn.softmax(dim=-1).type_as(x)
        else:
            attn = (q * self.scale) @ k.transpose(-2, -1)
            if self.use_rel_pos:
                attn = add_decomposed_rel_pos(attn, q, self.rel_pos_h, self.rel_pos_w, (H, W), (H, W), self.interp_type)
            attn = attn.softmax(dim=-1)
        x = (attn @ v).view(B, self.num_heads, H, W, -1).permute(0, 2, 3, 1, 4).reshape(B, H, W, -1)
        x = self.proj(x)

        return x


class ResBottleneckBlock(CNNBlockBase):
    """
    The standard bottleneck residual block without the last activation layer.
    It contains 3 conv layers with kernels 1x1, 3x3, 1x1.
    """

    def __init__(
        self,
        in_channels,
        out_channels,
        bottleneck_channels,
        norm="LN",
        act_layer=nn.GELU,
    ):
        """
        Args:
            in_channels (int): Number of input channels.
            out_channels (int): Number of output channels.
            bottleneck_channels (int): number of output channels for the 3x3
                "bottleneck" conv layers.
            norm (str or callable): normalization for all conv layers.
                See :func:`layers.get_norm` for supported format.
            act_layer (callable): activation for all conv layers.
        """
        super().__init__(in_channels, out_channels, 1)

        self.conv1 = Conv2d(in_channels, bottleneck_channels, 1, bias=False)
        self.norm1 = get_norm(norm, bottleneck_channels)
        self.act1 = act_layer()

        self.conv2 = Conv2d(
            bottleneck_channels,
            bottleneck_channels,
            3,
            padding=1,
            bias=False,
        )
        self.norm2 = get_norm(norm, bottleneck_channels)
        self.act2 = act_layer()

        self.conv3 = Conv2d(bottleneck_channels, out_channels, 1, bias=False)
        self.norm3 = get_norm(norm, out_channels)

        for layer in [self.conv1, self.conv2, self.conv3]:
            weight_init.c2_msra_fill(layer)
        for layer in [self.norm1, self.norm2]:
            layer.weight.data.fill_(1.0)
            layer.bias.data.zero_()
        # zero init last norm layer.
        self.norm3.weight.data.zero_()
        self.norm3.bias.data.zero_()

    def forward(self, x):
        out = x
        for layer in self.children():
            out = layer(out)

        out = x + out
        return out


class Block(nn.Module):
    """Transformer blocks with support of window attention and residual propagation blocks"""

    def __init__(
        self,
        dim,
        num_heads,
        mlp_ratio=4.0,
        qkv_bias=True,
        drop_path=0.0,
        norm_layer=LayerNormWithForceFP32,
        act_layer=nn.GELU,
        use_rel_pos=False,
        rel_pos_zero_init=True,
        window_size=0,
        use_residual_block=False,
        input_size=None,
        beit_like_qkv_bias=False,
        beit_like_gamma=False,
        interp_type="vitdet",
    ):
        """
        Args:
            dim (int): Number of input channels.
            num_heads (int): Number of attention heads in each ViT block.
            mlp_ratio (float): Ratio of mlp hidden dim to embedding dim.
            qkv_bias (bool): If True, add a learnable bias to query, key, value.
            drop_path (float): Stochastic depth rate.
            norm_layer (nn.Module): Normalization layer.
            act_layer (nn.Module): Activation layer.
            use_rel_pos (bool): If True, add relative positional embeddings to the attention map.
            rel_pos_zero_init (bool): If True, zero initialize relative positional parameters.
            window_size (int): Window size for window attention blocks. If it equals 0, then not
                use window attention.
            use_residual_block (bool): If True, use a residual block after the MLP block.
            input_size (int or None): Input resolution for calculating the relative positional
                parameter size.
            beit_like_qkv_bias (bool)
            beit_like_gamma (bool)
        """
        super().__init__()
        self.norm1 = norm_layer(dim)
        self.attn = Attention(
            dim,
            num_heads=num_heads,
            qkv_bias=qkv_bias,
            use_rel_pos=use_rel_pos,
            rel_pos_zero_init=rel_pos_zero_init,
            input_size=input_size if window_size == 0 else (window_size, window_size),
            beit_like_qkv_bias=beit_like_qkv_bias,
            interp_type=interp_type,
        )

        self.drop_path = DropPath(drop_path) if drop_path > 0.0 else nn.Identity()
        self.norm2 = norm_layer(dim)
        self.mlp = Mlp(in_features=dim, hidden_features=int(dim * mlp_ratio), act_layer=act_layer)

        self.window_size = window_size

        self.use_residual_block = use_residual_block
        if use_residual_block:
            # Use a residual block with bottleneck channel as dim // 2
            self.residual = ResBottleneckBlock(
                in_channels=dim,
                out_channels=dim,
                bottleneck_channels=dim // 2,
                norm="LN",
                act_layer=act_layer,
            )

        self.beit_like_gamma = beit_like_gamma
        if beit_like_gamma:
            self.gamma_1 = nn.Parameter(torch.ones((dim)), requires_grad=True)
            self.gamma_2 = nn.Parameter(torch.ones((dim)), requires_grad=True)

    def forward(self, x):
        shortcut = x
        x = self.norm1(x)
        # Window partition
        if self.window_size > 0:
            H, W = x.shape[1], x.shape[2]
            x, pad_hw = window_partition(x, self.window_size)

        x = self.attn(x)
        # Reverse window partition
        if self.window_size > 0:
            x = window_unpartition(x, self.window_size, pad_hw, (H, W))

        if self.beit_like_gamma:
            x = shortcut + self.drop_path(self.gamma_1 * x)
            x = x + self.drop_path(self.gamma_2 * self.mlp(self.norm2(x)))
        else:
            x = shortcut + self.drop_path(x)
            x = x + self.drop_path(self.mlp(self.norm2(x)))

        if self.use_residual_block:
            x = self.residual(x.permute(0, 3, 1, 2)).permute(0, 2, 3, 1)

        return x


class EVAViT(Backbone):
    """
    This module implements Vision Transformer (ViT) backbone in :paper:`vitdet`.
    "Exploring Plain Vision Transformer Backbones for Object Detection",
    https://arxiv.org/abs/2203.16527
    """

    def __init__(
        self,
        img_size=1024,
        patch_size=16,
        in_chans=3,
        embed_dim=768,
        depth=12,
        num_heads=12,
        mlp_ratio=4.0,
        qkv_bias=True,
        drop_path_rate=0.0,
        norm_layer=LayerNormWithForceFP32,
        act_layer=nn.GELU,
        use_abs_pos=True,
        use_rel_pos=False,
        rel_pos_zero_init=True,
        window_size=0,
        window_block_indexes=(),
        residual_block_indexes=(),
        use_act_checkpoint=False,
        pretrain_img_size=224,
        pretrain_use_cls_token=True,
        out_feature="last_feat",
        beit_like_qkv_bias=True,
        beit_like_gamma=False,
        freeze_patch_embed=False,
        interp_type="vitdet", 
    ):
        """
        Args:
            img_size (int): Input image size.
            patch_size (int): Patch size.
            in_chans (int): Number of input image channels.
            embed_dim (int): Patch embedding dimension.
            depth (int): Depth of ViT.
            num_heads (int): Number of attention heads in each ViT block.
            mlp_ratio (float): Ratio of mlp hidden dim to embedding dim.
            qkv_bias (bool): If True, add a learnable bias to query, key, value.
            drop_path_rate (float): Stochastic depth rate.
            norm_layer (nn.Module): Normalization layer.
            act_layer (nn.Module): Activation layer.
            use_abs_pos (bool): If True, use absolute positional embeddings.
            use_rel_pos (bool): If True, add relative positional embeddings to the attention map.
            rel_pos_zero_init (bool): If True, zero initialize relative positional parameters.
            window_size (int): Window size for window attention blocks.
            window_block_indexes (list): Indexes for blocks using window attention.
            residual_block_indexes (list): Indexes for blocks using conv propagation.
            use_act_checkpoint (bool): If True, use activation checkpointing.
            pretrain_img_size (int): input image size for pretraining models.
            pretrain_use_cls_token (bool): If True, pretrainig models use class token.
            out_feature (str): name of the feature from the last block.
            beit_like_qkv_bias (bool): beit_like_model that has gamma_1 and gamma_2 in blocks and qkv_bias=False
            beit_like_gamma (bool)
            freeze_patch_embed (bool)
            interp_type: "vitdet" for training / fine-ting, "beit" for eval (slightly improvement at a higher res)
        """
        super().__init__()
        self.pretrain_use_cls_token = pretrain_use_cls_token

        self.patch_embed = PatchEmbed(
            kernel_size=(patch_size, patch_size),
            stride=(patch_size, patch_size),
            in_chans=in_chans,
            embed_dim=embed_dim,
        )

        if use_abs_pos:
            # Initialize absolute positional embedding with pretrain image size.
            num_patches = (pretrain_img_size // patch_size) * (pretrain_img_size // patch_size)
            num_positions = (num_patches + 1) if pretrain_use_cls_token else num_patches
            self.pos_embed = nn.Parameter(torch.zeros(1, num_positions, embed_dim))
        else:
            self.pos_embed = None

        # stochastic depth decay rule
        dpr = [x.item() for x in torch.linspace(0, drop_path_rate, depth)]

        self.blocks = nn.ModuleList()
        if beit_like_qkv_bias:
            qkv_bias = False
        for i in range(depth):
            block = Block(
                dim=embed_dim,
                num_heads=num_heads,
                mlp_ratio=mlp_ratio,
                qkv_bias=qkv_bias,
                drop_path=dpr[i],
                norm_layer=norm_layer,
                act_layer=act_layer,
                use_rel_pos=use_rel_pos,
                rel_pos_zero_init=rel_pos_zero_init,
                window_size=window_size if i in window_block_indexes else 0,
                use_residual_block=i in residual_block_indexes,
                input_size=(img_size // patch_size, img_size // patch_size),
                beit_like_qkv_bias=beit_like_qkv_bias,
                beit_like_gamma=beit_like_gamma,
                interp_type=interp_type,
            )
            if use_act_checkpoint:
                block = checkpoint_wrapper(block)
            self.blocks.append(block)

        self._out_feature_channels = {out_feature: embed_dim}
        self._out_feature_strides = {out_feature: patch_size}
        self._out_features = [out_feature]

        if self.pos_embed is not None:
            trunc_normal_(self.pos_embed, std=0.02)

        self.freeze_patch_embed = freeze_patch_embed
        self.apply(self._init_weights)

    def _init_weights(self, m):
        if isinstance(m, nn.Linear):
            trunc_normal_(m.weight, std=0.02)
            if isinstance(m, nn.Linear) and m.bias is not None:
                nn.init.constant_(m.bias, 0)
        elif isinstance(m, LayerNormWithForceFP32):
            nn.init.constant_(m.bias, 0)
            nn.init.constant_(m.weight, 1.0)

        if self.freeze_patch_embed:
            for n, p in self.patch_embed.named_parameters():
                p.requires_grad = False

    def forward(self, x):
        x = self.patch_embed(x)
        if self.pos_embed is not None:
            x = x + get_abs_pos(
                self.pos_embed, self.pretrain_use_cls_token, (x.shape[1], x.shape[2])
            )

        for blk in self.blocks:
            x = blk(x)

        outputs = {self._out_features[0]: x.permute(0, 3, 1, 2)}
        return outputs


class SimpleFeaturePyramid(Backbone):
    """
    This module implements SimpleFeaturePyramid in :paper:`vitdet`.
    It creates pyramid features built on top of the input feature map.
    """

    def __init__(
        self,
        net,
        in_feature,
        out_channels,
        scale_factors,
        top_block=None,
        norm="LN",
        square_pad=0,
    ):
        """
        Args:
            net (Backbone): module representing the subnetwork backbone.
                Must be a subclass of :class:`Backbone`.
            in_feature (str): names of the input feature maps coming
                from the net.
            out_channels (int): number of channels in the output feature maps.
            scale_factors (list[float]): list of scaling factors to upsample or downsample
                the input features for creating pyramid features.
            top_block (nn.Module or None): if provided, an extra operation will
                be performed on the output of the last (smallest resolution)
                pyramid output, and the result will extend the result list. The top_block
                further downsamples the feature map. It must have an attribute
                "num_levels", meaning the number of extra pyramid levels added by
                this block, and "in_feature", which is a string representing
                its input feature (e.g., p5).
            norm (str): the normalization to use.
            square_pad (int): If > 0, require input images to be padded to specific square size.
        """
        super(SimpleFeaturePyramid, self).__init__()
        assert isinstance(net, Backbone)
        self.scale_factors = scale_factors

        input_shapes = net.output_shape()
        strides = [int(input_shapes[in_feature].stride / scale) for scale in scale_factors]
        _assert_strides_are_log2_contiguous(strides)

        dim = input_shapes[in_feature].channels
        self.stages = []
        use_bias = norm == ""
        for idx, scale in enumerate(scale_factors):
            out_dim = dim
            if scale == 4.0:
                layers = [
                    nn.ConvTranspose2d(dim, dim // 2, kernel_size=2, stride=2),
                    get_norm(norm, dim // 2),
                    nn.GELU(),
                    nn.ConvTranspose2d(dim // 2, dim // 4, kernel_size=2, stride=2),
                ]
                out_dim = dim // 4
            elif scale == 2.0:
                layers = [nn.ConvTranspose2d(dim, dim // 2, kernel_size=2, stride=2)]
                out_dim = dim // 2
            elif scale == 1.0:
                layers = []
            elif scale == 0.5:
                layers = [nn.MaxPool2d(kernel_size=2, stride=2)]
            else:
                raise NotImplementedError(f"scale_factor={scale} is not supported yet.")

            layers.extend(
                [
                    Conv2d(
                        out_dim,
                        out_channels,
                        kernel_size=1,
                        bias=use_bias,
                        norm=get_norm(norm, out_channels),
                    ),
                    Conv2d(
                        out_channels,
                        out_channels,
                        kernel_size=3,
                        padding=1,
                        bias=use_bias,
                        norm=get_norm(norm, out_channels),
                    ),
                ]
            )
            layers = nn.Sequential(*layers)

            stage = int(math.log2(strides[idx]))
            self.add_module(f"simfp_{stage}", layers)
            self.stages.append(layers)

        self.net = net
        self.in_feature = in_feature
        self.top_block = top_block
        # Return feature names are "p<stage>", like ["p2", "p3", ..., "p6"]
        self._out_feature_strides = {"p{}".format(int(math.log2(s))): s for s in strides}
        # top block output feature maps.
        if self.top_block is not None:
            for s in range(stage, stage + self.top_block.num_levels):
                self._out_feature_strides["p{}".format(s + 1)] = 2 ** (s + 1)

        self._out_features = list(self._out_feature_strides.keys())
        self._out_feature_channels = {k: out_channels for k in self._out_features}
        self._size_divisibility = strides[-1]
        self._square_pad = square_pad

    @property
    def padding_constraints(self):
        return {
            "size_divisiblity": self._size_divisibility,
            "square_size": self._square_pad,
        }

    def forward(self, x):
        """
        Args:
            x: Tensor of shape (N,C,H,W). H, W must be a multiple of ``self.size_divisibility``.

        Returns:
            dict[str->Tensor]:
                mapping from feature map name to pyramid feature map tensor
                in high to low resolution order. Returned feature names follow the FPN
                convention: "p<stage>", where stage has stride = 2 ** stage e.g.,
                ["p2", "p3", ..., "p6"].
        """
        bottom_up_features = self.net(x)
        features = bottom_up_features[self.in_feature]
        results = []

        for stage in self.stages:
            results.append(stage(features))

        if self.top_block is not None:
            if self.top_block.in_feature in bottom_up_features:
                top_block_in_feature = bottom_up_features[self.top_block.in_feature]
            else:
                top_block_in_feature = results[self._out_features.index(self.top_block.in_feature)]
            results.extend(self.top_block(top_block_in_feature))
        assert len(self._out_features) == len(results)
        return {f: res for f, res in zip(self._out_features, results)}



@BACKBONE_REGISTRY.register()
class D2_EVA01(SimpleFeaturePyramid):
    def __init__(self, cfg, input_shape):
        
        super().__init__(
            net = EVAViT(
                img_size= cfg.MODEL.EVA01.IMAGE_SIZE,
                patch_size=cfg.MODEL.EVA01.PATCH_SIZE,
                window_size= cfg.MODEL.EVA01.WINDOW_SIZE,
                embed_dim= cfg.MODEL.EVA01.DMBED_DIM,
                depth= cfg.MODEL.EVA01.DEPTH,
                num_heads= cfg.MODEL.EVA01.NUM_HEADS ,
                drop_path_rate= cfg.MODEL.EVA01.DROP_PATH_RATE,
                mlp_ratio= cfg.MODEL.EVA01.MLP_RATIO,
                qkv_bias=True,
                norm_layer=partial(nn.LayerNorm, eps=1e-6),
                window_block_indexes= cfg.MODEL.EVA01.WINDOW_BLOCK_INDEXES,
                residual_block_indexes=[],
                use_act_checkpoint = True,
                use_rel_pos = True,
                out_feature="last_feat",
                beit_like_qkv_bias=cfg.MODEL.EVA01.BEIT_LIKE_QKV_BIAS ,
                beit_like_gamma= cfg.MODEL.EVA01.BEIT_LIKE_GAMMA,
                freeze_patch_embed= cfg.MODEL.EVA01.FREEZE_PATH_EMBED,
            ),
            in_feature = "last_feat",
            out_channels=256,
            scale_factors=(2.0, 1.0, 0.5),  # (4.0, 2.0, 1.0, 0.5) in ViTDet
            top_block=LastLevelMaxPool(),
            norm="LN",
            square_pad=cfg.MODEL.EVA01.IMAGE_SIZE,

        )
        pretrained_weight = cfg.MODEL.EVA01.PRETRAINED_WEIGHT 
        if pretrained_weight:
            checkpoint = torch.load(pretrained_weight, map_location='cpu')
            print(f'\nload pretrain weight from {pretrained_weight} \n') 
            self.load_state_dict(checkpoint['model'], strict=False)
 
    def output_shape(self):
        return {
            name: ShapeSpec(
                channels=self._out_feature_channels[name], stride=self._out_feature_strides[name]
            )
            for name in self._out_features
        }

    @property
    def size_divisibility(self):
        return 32



def get_vit_lr_decay_rate(name, lr_decay_rate=1.0, num_layers=12):
    """
    Calculate lr decay rate for different ViT blocks.
    Args:
        name (string): parameter name.
        lr_decay_rate (float): base lr decay rate.
        num_layers (int): number of ViT blocks.

    Returns:
        lr decay rate for the given parameter.
    """
    layer_id = num_layers + 1
    if 'backbone' in name: #name.startswith("backbone"):
        if ".pos_embed" in name or ".patch_embed" in name:
            layer_id = 0
        elif ".blocks." in name and ".residual." not in name:
            layer_id = int(name[name.find(".blocks.") :].split(".")[2]) + 1

    return lr_decay_rate ** (num_layers + 1 - layer_id)