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more changes to the third party lib.
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import numpy as np
import os
from scipy.io import loadmat
import cv2
from menpo.shape.pointcloud import PointCloud
from menpo.transform import ThinPlateSplines
import menpo.io as mio
import matplotlib.pyplot as plt
from scipy.ndimage import zoom
from glob import glob
from deformation_functions import *
'''********* bounding box and image loading functions *********'''
def center_margin_bb(bb, img_bounds, margin=0.25):
bb_size = ([bb[0, 2] - bb[0, 0], bb[0, 3] - bb[0, 1]])
margins = (np.max(bb_size) * (1 + margin) - bb_size) / 2
bb_new = np.zeros_like(bb)
bb_new[0, 0] = np.maximum(bb[0, 0] - margins[0], 0)
bb_new[0, 2] = np.minimum(bb[0, 2] + margins[0], img_bounds[1])
bb_new[0, 1] = np.maximum(bb[0, 1] - margins[1], 0)
bb_new[0, 3] = np.minimum(bb[0, 3] + margins[1], img_bounds[0])
return bb_new
def load_bb_files(bb_file_dirs):
bb_files_dict = {}
for bb_file in bb_file_dirs:
bb_mat = loadmat(bb_file)['bounding_boxes']
num_imgs = np.max(bb_mat.shape)
for i in range(num_imgs):
name = bb_mat[0][i][0][0][0][0]
bb_init = bb_mat[0][i][0][0][1] - 1 # matlab indicies
bb_gt = bb_mat[0][i][0][0][2] - 1 # matlab indicies
if str(name) in bb_files_dict.keys():
print str(name), 'already loaded from: ', bb_file
bb_files_dict[str(name)] = (bb_init, bb_gt)
return bb_files_dict
def load_bb_dictionary(bb_dir, mode, test_data='full'):
if mode == 'TRAIN':
bb_dirs = \
['bounding_boxes_afw.mat', 'bounding_boxes_helen_trainset.mat', 'bounding_boxes_lfpw_trainset.mat']
else:
if test_data == 'common':
bb_dirs = \
['bounding_boxes_helen_testset.mat', 'bounding_boxes_lfpw_testset.mat']
elif test_data == 'challenging':
bb_dirs = ['bounding_boxes_ibug.mat']
elif test_data == 'full':
bb_dirs = \
['bounding_boxes_ibug.mat', 'bounding_boxes_helen_testset.mat', 'bounding_boxes_lfpw_testset.mat']
elif test_data == 'training':
bb_dirs = \
['bounding_boxes_afw.mat', 'bounding_boxes_helen_trainset.mat', 'bounding_boxes_lfpw_trainset.mat']
else:
bb_dirs=None
if mode == 'TEST' and test_data not in ['full', 'challenging', 'common', 'training']:
bb_files_dict = None
else:
bb_dirs = [os.path.join(bb_dir, dataset) for dataset in bb_dirs]
bb_files_dict = load_bb_files(bb_dirs)
return bb_files_dict
def crop_to_face_image(img, bb_dictionary=None, gt=True, margin=0.25, image_size=256):
name = img.path.name
img_bounds = img.bounds()[1]
if bb_dictionary is None:
bb_menpo = img.landmarks['PTS'].bounding_box().points
bb = np.array([[bb_menpo[0, 1], bb_menpo[0, 0], bb_menpo[2, 1], bb_menpo[2, 0]]])
else:
if gt:
bb = bb_dictionary[name][1] # ground truth
else:
bb = bb_dictionary[name][0] # init from face detector
bb = center_margin_bb(bb, img_bounds, margin=margin)
bb_pointcloud = PointCloud(np.array([[bb[0, 1], bb[0, 0]],
[bb[0, 3], bb[0, 0]],
[bb[0, 3], bb[0, 2]],
[bb[0, 1], bb[0, 2]]]))
face_crop = img.crop_to_pointcloud(bb_pointcloud).resize([image_size, image_size])
return face_crop
def augment_face_image(img, image_size=256, crop_size=248, angle_range=30, flip=True):
# taken from MDM
jaw_indices = np.arange(0, 17)
lbrow_indices = np.arange(17, 22)
rbrow_indices = np.arange(22, 27)
upper_nose_indices = np.arange(27, 31)
lower_nose_indices = np.arange(31, 36)
leye_indices = np.arange(36, 42)
reye_indices = np.arange(42, 48)
outer_mouth_indices = np.arange(48, 60)
inner_mouth_indices = np.arange(60, 68)
mirrored_parts_68 = np.hstack([
jaw_indices[::-1], rbrow_indices[::-1], lbrow_indices[::-1],
upper_nose_indices, lower_nose_indices[::-1],
np.roll(reye_indices[::-1], 4), np.roll(leye_indices[::-1], 4),
np.roll(outer_mouth_indices[::-1], 7),
np.roll(inner_mouth_indices[::-1], 5)
])
def mirror_landmarks_68(lms, im_size):
return PointCloud(abs(np.array([0, im_size[1]]) - lms.as_vector(
).reshape(-1, 2))[mirrored_parts_68])
def mirror_image(im):
im = im.copy()
im.pixels = im.pixels[..., ::-1].copy()
for group in im.landmarks:
lms = im.landmarks[group]
if lms.points.shape[0] == 68:
im.landmarks[group] = mirror_landmarks_68(lms, im.shape)
return im
lim = image_size - crop_size
min_crop_inds = np.random.randint(0, lim, 2)
max_crop_inds = min_crop_inds + crop_size
flip_rand = np.random.random() > 0.5
rot_angle = 2 * angle_range * np.random.random_sample() - angle_range
if flip and flip_rand:
rand_crop = img.crop(min_crop_inds, max_crop_inds)
rand_crop = mirror_image(rand_crop)
rand_crop = rand_crop.rotate_ccw_about_centre(rot_angle).resize([image_size, image_size])
else:
rand_crop = img.crop(min_crop_inds, max_crop_inds). \
rotate_ccw_about_centre(rot_angle).resize([image_size, image_size])
return rand_crop
def load_menpo_image_list(img_dir, mode, bb_dictionary=None, image_size=256, margin=0.25, bb_type='gt',
test_data='full', augment=True):
def crop_to_face_image_gt(img, bb_dictionary=bb_dictionary, margin=margin, image_size=image_size):
return crop_to_face_image(img, bb_dictionary, gt=True, margin=margin, image_size=image_size)
def crop_to_face_image_init(img, bb_dictionary=bb_dictionary, margin=margin, image_size=image_size):
return crop_to_face_image(img, bb_dictionary, gt=False, margin=margin, image_size=image_size)
if mode is 'TRAIN':
img_set_dir = os.path.join(img_dir, 'training_set')
else:
img_set_dir = os.path.join(img_dir, test_data + '_set')
image_menpo_list = mio.import_images(img_set_dir, verbose=True)
if bb_type is 'gt':
face_crop_image_list = image_menpo_list.map(crop_to_face_image_gt)
else:
face_crop_image_list = image_menpo_list.map(crop_to_face_image_init)
if mode is 'TRAIN' and augment:
out_image_list = face_crop_image_list.map(augment_face_image)
else:
out_image_list = face_crop_image_list
return out_image_list
def augment_menpo_img_ns(img, img_dir_ns, p_ns=0):
img = img.copy()
texture_aug = p_ns > 0.5
if texture_aug:
ns_augs = glob(os.path.join(img_dir_ns, img.path.name.split('.')[0] + '*'))
num_augs = len(ns_augs)
if num_augs > 1:
ns_ind = np.random.randint(1, num_augs)
ns_aug = mio.import_image(ns_augs[ns_ind])
ns_pixels = ns_aug.pixels
img.pixels = ns_pixels
return img
def augment_menpo_img_geom(img, p_geom=0):
img = img.copy()
if p_geom > 0.5:
lms_geom_warp=deform_face_geometric_style(img.landmarks['PTS'].points.copy(),p_scale=p_geom,p_shift=p_geom)
img = warp_face_image_tps(img,PointCloud(lms_geom_warp))
return img
def warp_face_image_tps(img,new_shape):
tps = ThinPlateSplines(new_shape, img.landmarks['PTS'])
img_warp=img.warp_to_shape(img.shape,tps)
img_warp.landmarks['PTS']=new_shape
return img_warp
def load_menpo_image_list_artistic_aug(
img_dir, train_crop_dir, img_dir_ns, mode, bb_dictionary=None, image_size=256, margin=0.25,
bb_type='gt', test_data='full',augment_basic=True, augment_texture=False, p_texture=0,
augment_geom=False, p_geom=0):
def crop_to_face_image_gt(img):
return crop_to_face_image(img, bb_dictionary, gt=True, margin=margin, image_size=image_size)
def crop_to_face_image_init(img):
return crop_to_face_image(img, bb_dictionary, gt=False, margin=margin, image_size=image_size)
def augment_menpo_img_ns_rand(img):
return augment_menpo_img_ns(img, img_dir_ns, p_ns=1. * (np.random.rand() <= p_texture))
def augment_menpo_img_geom_rand(img):
return augment_menpo_img_geom(img, p_geom=1. * (np.random.rand() <= p_geom))
if mode is 'TRAIN':
img_set_dir = os.path.join(img_dir, train_crop_dir)
out_image_list = mio.import_images(img_set_dir, verbose=True)
if augment_texture:
out_image_list = out_image_list.map(augment_menpo_img_ns_rand)
if augment_geom:
out_image_list = out_image_list.map(augment_menpo_img_geom_rand)
if augment_basic:
out_image_list = out_image_list.map(augment_face_image)
else:
img_set_dir = os.path.join(img_dir, test_data + '_set')
out_image_list = mio.import_images(img_set_dir, verbose=True)
if test_data in ['full', 'challenging', 'common', 'training', 'test']:
if bb_type is 'gt':
out_image_list = out_image_list.map(crop_to_face_image_gt)
elif bb_type is 'init':
out_image_list = out_image_list.map(crop_to_face_image_init)
return out_image_list
def reload_img_menpo_list_artistic_aug_train(
img_dir, train_crop_dir, img_dir_ns, mode, train_inds, image_size=256,
augment_basic=True, augment_texture=False, p_texture=0, augment_geom=False, p_geom=0):
img_menpo_list = load_menpo_image_list_artistic_aug(
img_dir=img_dir, train_crop_dir=train_crop_dir, img_dir_ns=img_dir_ns, mode=mode,image_size=image_size,
augment_basic=augment_basic, augment_texture=augment_texture, p_texture=p_texture, augment_geom=augment_geom,
p_geom=p_geom)
img_menpo_list_train = img_menpo_list[train_inds]
return img_menpo_list_train
'''********* heat-maps and image loading functions *********'''
# look for: ECT-FaceAlignment/caffe/src/caffe/layers/data_heatmap.cpp
def gaussian(x, y, x0, y0, sigma=6):
return 1./(np.sqrt(2*np.pi)*sigma) * np.exp(-0.5 * ((x-x0)**2 + (y-y0)**2) / sigma**2)
def create_heat_maps(landmarks, num_landmarks=68, image_size=256, sigma=6):
x, y = np.mgrid[0:image_size, 0:image_size]
maps = np.zeros((image_size, image_size, num_landmarks))
for i in range(num_landmarks):
out = gaussian(x, y, landmarks[i,0], landmarks[i,1], sigma=sigma)
maps[:, :, i] = (8./3)*sigma*out # copied from ECT
return maps
def load_data(img_list, batch_inds, image_size=256, c_dim=3, num_landmarks=68 , sigma=6, scale='255',
save_landmarks=False, primary=False):
num_inputs = len(batch_inds)
batch_menpo_images = img_list[batch_inds]
images = np.zeros([num_inputs, image_size, image_size, c_dim]).astype('float32')
maps_small = np.zeros([num_inputs, image_size/4, image_size/4, num_landmarks]).astype('float32')
if primary:
maps = None
else:
maps = np.zeros([num_inputs, image_size, image_size, num_landmarks]).astype('float32')
if save_landmarks:
landmarks = np.zeros([num_inputs, num_landmarks, 2]).astype('float32')
else:
landmarks = None
for ind, img in enumerate(batch_menpo_images):
images[ind, :, :, :] = np.rollaxis(img.pixels, 0, 3)
if primary:
lms = img.resize([image_size/4,image_size/4]).landmarks['PTS'].points
maps_small[ind, :, :, :] = create_heat_maps(lms, num_landmarks, image_size/4, sigma)
else:
lms = img.landmarks['PTS'].points
maps[ind, :, :, :] = create_heat_maps(lms, num_landmarks, image_size, sigma)
maps_small[ind, :, :, :]=zoom(maps[ind, :, :, :],(0.25,0.25,1))
if save_landmarks:
landmarks[ind, :, :] = lms
if scale is '255':
images *= 255 # SAME AS ECT?
elif scale is '0':
images = 2 * images - 1
return images, maps, maps_small, landmarks
def heat_maps_to_image(maps, landmarks=None, image_size=256, num_landmarks=68):
if landmarks is None:
landmarks = heat_maps_to_landmarks(maps, image_size=image_size, num_landmarks=num_landmarks)
x, y = np.mgrid[0:image_size, 0:image_size]
pixel_dist = np.sqrt(
np.square(np.expand_dims(x, 2) - landmarks[:, 0]) + np.square(np.expand_dims(y, 2) - landmarks[:, 1]))
nn_landmark = np.argmin(pixel_dist, 2)
map_image = maps[x, y, nn_landmark]
map_image = (map_image-map_image.min())/(map_image.max()-map_image.min()) # normalize for visualization
return map_image
def heat_maps_to_landmarks(maps, image_size=256, num_landmarks=68):
landmarks = np.zeros((num_landmarks,2)).astype('float32')
for m_ind in range(num_landmarks):
landmarks[m_ind, :] = np.unravel_index(maps[:, :, m_ind].argmax(), (image_size, image_size))
return landmarks
def batch_heat_maps_to_landmarks(batch_maps, batch_size, image_size=256, num_landmarks=68):
batch_landmarks = np.zeros((batch_size,num_landmarks, 2)).astype('float32')
for i in range(batch_size):
batch_landmarks[i,:,:]=heat_maps_to_landmarks(
batch_maps[i,:,:,:], image_size=image_size, num_landmarks=num_landmarks)
return batch_landmarks
def print_training_params_to_file(init_locals):
del init_locals['self']
with open(os.path.join(init_locals['save_log_path'], 'Training_Parameters.txt'), 'w') as f:
f.write('Training Parameters:\n\n')
for key, value in init_locals.items():
f.write('* %s: %s\n' % (key, value))
def create_img_with_landmarks(image, landmarks, image_size=256, num_landmarks=68, scale='255', circle_size=2):
image = image.reshape(image_size, image_size, -1)
if scale is '0':
image = 127.5 * (image + 1)
elif scale is '1':
image *= 255
landmarks = landmarks.reshape(num_landmarks, 2)
landmarks = np.clip(landmarks, 0, image_size)
for (y, x) in landmarks.astype('int'):
cv2.circle(image, (x, y), circle_size, (255, 0, 0), -1)
return image
def merge_images_landmarks_maps(images, maps, image_size=256, num_landmarks=68, num_samples=9, scale='255',
circle_size=2):
images = images[:num_samples]
if maps.shape[1] is not image_size:
images = zoom(images, (1, 0.25, 0.25, 1))
image_size /= 4
cmap = plt.get_cmap('jet')
row = int(np.sqrt(num_samples))
merged = np.zeros([row * image_size, row * image_size * 2, 3])
for idx, img in enumerate(images):
i = idx // row
j = idx % row
img_lamdmarks = heat_maps_to_landmarks(maps[idx, :, :, :], image_size=image_size, num_landmarks=num_landmarks)
map_image = heat_maps_to_image(maps[idx, :, :, :], img_lamdmarks, image_size=image_size,
num_landmarks=num_landmarks)
rgba_map_image = cmap(map_image)
map_image = np.delete(rgba_map_image, 3, 2) * 255
img = create_img_with_landmarks(img, img_lamdmarks, image_size, num_landmarks, scale=scale,
circle_size=circle_size)
merged[i * image_size:(i + 1) * image_size, (j * 2) * image_size:(j * 2 + 1) * image_size, :] = img
merged[i * image_size:(i + 1) * image_size, (j * 2 + 1) * image_size:(j * 2 + 2) * image_size, :] = map_image
return merged
def merge_compare_maps(maps_small, maps, image_size=64, num_landmarks=68, num_samples=9):
maps_small = maps_small[:num_samples]
maps = maps[:num_samples]
if maps_small.shape[1] is not image_size:
image_size = maps_small.shape[1]
if maps.shape[1] is not maps_small.shape[1]:
maps_rescale = zoom(maps, (1, 0.25, 0.25, 1))
else:
maps_rescale = maps
cmap = plt.get_cmap('jet')
row = int(np.sqrt(num_samples))
merged = np.zeros([row * image_size, row * image_size * 2, 3])
for idx, map_small in enumerate(maps_small):
i = idx // row
j = idx % row
map_image_small = heat_maps_to_image(map_small, image_size=image_size, num_landmarks=num_landmarks)
map_image = heat_maps_to_image(maps_rescale[idx, :, :, :], image_size=image_size, num_landmarks=num_landmarks)
rgba_map_image = cmap(map_image)
map_image = np.delete(rgba_map_image, 3, 2) * 255
rgba_map_image_small = cmap(map_image_small)
map_image_small = np.delete(rgba_map_image_small, 3, 2) * 255
merged[i * image_size:(i + 1) * image_size, (j * 2) * image_size:(j * 2 + 1) * image_size, :] = map_image_small
merged[i * image_size:(i + 1) * image_size, (j * 2 + 1) * image_size:(j * 2 + 2) * image_size, :] = map_image
return merged
def normalize_map(map_in):
return (map_in - map_in.min()) / (map_in.max() - map_in.min())
def map_to_rgb(map_gray):
cmap = plt.get_cmap('jet')
rgba_map_image = cmap(map_gray)
map_rgb = np.delete(rgba_map_image, 3, 2) * 255
return map_rgb
def load_art_data(img_list, batch_inds, image_size=256, c_dim=3, scale='255'):
num_inputs = len(batch_inds)
batch_menpo_images = img_list[batch_inds]
images = np.zeros([num_inputs, image_size, image_size, c_dim]).astype('float32')
for ind, img in enumerate(batch_menpo_images):
images[ind, :, :, :] = np.rollaxis(img.pixels, 0, 3)
if scale is '255':
images *= 255 # SAME AS ECT?
elif scale is '0':
images = 2 * images - 1
return images
def merge_images_landmarks_maps_gt(images, maps, maps_gt, image_size=256, num_landmarks=68, num_samples=9, scale='255',
circle_size=2, test_data='full', fast=False):
images = images[:num_samples]
if maps.shape[1] is not image_size:
images = zoom(images, (1, 0.25, 0.25, 1))
image_size /= 4
if maps_gt.shape[1] is not image_size:
maps_gt = zoom(maps_gt, (1, 0.25, 0.25, 1))
cmap = plt.get_cmap('jet')
row = int(np.sqrt(num_samples))
merged = np.zeros([row * image_size, row * image_size * 3, 3])
if fast:
maps_gt_images = np.amax(maps_gt, 3)
maps_images = np.amax(maps, 3)
for idx, img in enumerate(images):
i = idx // row
j = idx % row
img_landmarks = heat_maps_to_landmarks(maps[idx, :, :, :], image_size=image_size, num_landmarks=num_landmarks)
if fast:
map_image = maps_images[idx]
else:
map_image = heat_maps_to_image(maps[idx, :, :, :], img_landmarks, image_size=image_size,
num_landmarks=num_landmarks)
rgba_map_image = cmap(map_image)
map_image = np.delete(rgba_map_image, 3, 2) * 255
if test_data not in ['full', 'challenging', 'common', 'training']:
map_gt_image = map_image.copy()
else:
if fast:
map_gt_image = maps_gt_images[idx]
else:
map_gt_image = heat_maps_to_image(maps_gt[idx, :, :, :], image_size=image_size, num_landmarks=num_landmarks)
rgba_map_gt_image = cmap(map_gt_image)
map_gt_image = np.delete(rgba_map_gt_image, 3, 2) * 255
img = create_img_with_landmarks(img, img_landmarks, image_size, num_landmarks, scale=scale,
circle_size=circle_size)
merged[i * image_size:(i + 1) * image_size, (j * 3) * image_size:(j * 3 + 1) * image_size, :] = img
merged[i * image_size:(i + 1) * image_size, (j * 3 + 1) * image_size:(j * 3 + 2) * image_size, :] = map_image
merged[i * image_size:(i + 1) * image_size, (j * 3 + 2) * image_size:(j * 3 + 3) * image_size, :] = map_gt_image
return merged
def map_comapre_channels(images,maps1, maps2, image_size=64, num_landmarks=68, scale='255',test_data='full'):
map1 = maps1[0]
map2 = maps2[0]
image = images[0]
if image.shape[0] is not image_size:
image = zoom(image, (0.25, 0.25, 1))
if scale is '1':
image *= 255
elif scale is '0':
image = 127.5 * (image + 1)
row = np.ceil(np.sqrt(num_landmarks)).astype(np.int64)
merged = np.zeros([row * image_size, row * image_size * 2, 3])
for idx in range(num_landmarks):
i = idx // row
j = idx % row
channel_map = map_to_rgb(normalize_map(map1[:, :, idx]))
if test_data not in ['full', 'challenging', 'common', 'training']:
channel_map2=channel_map.copy()
else:
channel_map2 = map_to_rgb(normalize_map(map2[:, :, idx]))
merged[i * image_size:(i + 1) * image_size, (j * 2) * image_size:(j * 2 + 1) * image_size, :] = channel_map
merged[i * image_size:(i + 1) * image_size, (j * 2 + 1) * image_size:(j * 2 + 2) * image_size, :] = channel_map2
i = (idx + 1) // row
j = (idx + 1) % row
merged[i * image_size:(i + 1) * image_size, (j * 2) * image_size:(j * 2 + 1) * image_size, :] = image
return merged
def train_val_shuffle_inds_per_epoch(valid_inds, train_inds, train_iter, batch_size, log_path, save_log=True):
np.random.seed(0)
num_train_images = len(train_inds)
num_epochs = int(np.ceil((1. * train_iter) / (1. * num_train_images / batch_size)))+1
epoch_inds_shuffle = np.zeros((num_epochs, num_train_images)).astype(int)
img_inds = np.arange(num_train_images)
for i in range(num_epochs):
np.random.shuffle(img_inds)
epoch_inds_shuffle[i, :] = img_inds
if save_log:
with open(os.path.join(log_path, "train_val_shuffle_inds.csv"), "wb") as f:
if valid_inds is not None:
f.write(b'valid inds\n')
np.savetxt(f, valid_inds.reshape(1, -1), fmt='%i', delimiter=",")
f.write(b'train inds\n')
np.savetxt(f, train_inds.reshape(1, -1), fmt='%i', delimiter=",")
f.write(b'shuffle inds\n')
np.savetxt(f, epoch_inds_shuffle, fmt='%i', delimiter=",")
return epoch_inds_shuffle