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FROM ubuntu:22.04
FROM python:3.9
RUN useradd -m -u 1000 user
USER user
ENV PATH="/home/user/.local/bin:$PATH"
WORKDIR /app
RUN apt-get update
RUN apt-get install wget
RUN apt install -y git-all
RUN apt-get install -y dssp
RUN pip install --upgrade pip
RUN pip install git+https://github.com/a-r-j/graphein.git
RUN pip install numpy scipy torch==2.2 transformers==4.44.2
RUN pip install torch-geometric
RUN pip install pyg_lib torch_scatter torch_sparse torch_cluster torch_spline_conv -f https://data.pyg.org/whl/torch-2.2.0+cpu.html
RUN pip install gradio
COPY --chown=user . /app
CMD ["uvicorn", "app:app", "--host", "0.0.0.0", "--port", "7860"] |