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<!DOCTYPE html>
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<head>
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    <title>Chemistry Batch 13: Quantum Chemistry - Programming Framework</title>
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            text-decoration: underline;
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            margin: 1rem 0;
            font-weight: bold;
        }
    </style>
</head>
<body>
    <div class="container">
        <h1>Chemistry Batch 13: Quantum Chemistry</h1>
        
        <div class="navigation">
            <a href="index.html">← Back to Programming Framework</a>
            <a href="chemistry_index.html">← Back to Chemistry Index</a>
        </div>

        <div class="process-title">Process 1: Molecular Orbitals</div>
        <div class="figure">
            <div class="mermaid">
graph TD
    A1[Atomic Orbitals] --> B1[Molecular Orbital Method]
    C1[Electronic Structure] --> D1[Wave Function Analysis]
    E1[Energy Levels] --> F1[Computational Setup]
    
    B1 --> G1[Orbital Combination]
    D1 --> H1[Wave Function Calculation]
    F1 --> I1[Basis Set Selection]
    
    G1 --> J1[Linear Combination]
    H1 --> K1[Schrödinger Equation]
    I1 --> L1[Computational Parameters]
    
    J1 --> M1[Orbital Formation]
    K1 --> L1
    L1 --> N1[Energy Calculation]
    
    M1 --> O1[Bonding Orbitals]
    N1 --> P1[Quantum Calculation]
    O1 --> Q1[Electronic Structure]
    
    P1 --> R1[Antibonding Orbitals]
    Q1 --> S1[Orbital Analysis]
    R1 --> T1[Molecular Properties]
    
    S1 --> U1[Energy Level Analysis]
    T1 --> V1[Property Calculation]
    U1 --> W1[Quantum Efficiency]
    
    V1 --> X1[Molecular Characterization]
    W1 --> Y1[Process Optimization]
    X1 --> Z1[Final Molecular Orbitals]
    
    Y1 --> Z1
    
    style A1 fill:#ff6b6b,color:#fff
    style C1 fill:#ff6b6b,color:#fff
    style E1 fill:#ff6b6b,color:#fff
    
    style B1 fill:#ffd43b,color:#000
    style D1 fill:#ffd43b,color:#000
    style F1 fill:#ffd43b,color:#000
    style G1 fill:#ffd43b,color:#000
    style H1 fill:#ffd43b,color:#000
    style I1 fill:#ffd43b,color:#000
    style J1 fill:#ffd43b,color:#000
    style K1 fill:#ffd43b,color:#000
    style L1 fill:#ffd43b,color:#000
    
    style M1 fill:#51cf66,color:#fff
    style N1 fill:#51cf66,color:#fff
    style O1 fill:#51cf66,color:#fff
    style P1 fill:#51cf66,color:#fff
    style Q1 fill:#51cf66,color:#fff
    style R1 fill:#51cf66,color:#fff
    style S1 fill:#51cf66,color:#fff
    style T1 fill:#51cf66,color:#fff
    style U1 fill:#51cf66,color:#fff
    style V1 fill:#51cf66,color:#fff
    style W1 fill:#51cf66,color:#fff
    style X1 fill:#51cf66,color:#fff
    style Y1 fill:#51cf66,color:#fff
    
    style Z1 fill:#b197fc,color:#fff
            </div>
            <div class="figure-caption">
                <strong>Figure 1.</strong> Molecular orbitals process showing orbital combination, electronic structure, and quantum calculation.
            </div>
        </div>

        <div class="process-title">Process 2: Electronic Transitions</div>
        <div class="figure">
            <div class="mermaid">
graph TD
    A2[Ground State] --> B2[Electronic Transition Method]
    C2[Excited States] --> D2[Energy Level Analysis]
    E2[Photon Energy] --> F2[Transition Calculation]
    
    B2 --> G2[State Preparation]
    D2 --> H2[Energy Level Calculation]
    F2 --> I2[Transition Probability]
    
    G2 --> J2[Initial State]
    H2 --> K2[Energy Differences]
    I2 --> L2[Selection Rules]
    
    J2 --> M2[State Characterization]
    K2 --> L2
    L2 --> N2[Transition Analysis]
    
    M2 --> O2[State Transitions]
    N2 --> P2[Electronic Excitation]
    O2 --> Q2[Quantum Analysis]
    
    P2 --> R2[Excited State Formation]
    Q2 --> S2[Transition Analysis]
    R2 --> T2[State Properties]
    
    S2 --> U2[Transition Probability]
    T2 --> V2[Property Calculation]
    U2 --> W2[Quantum Efficiency]
    
    V2 --> X2[State Characterization]
    W2 --> Y2[Process Optimization]
    X2 --> Z2[Final Electronic States]
    
    Y2 --> Z2
    
    style A2 fill:#ff6b6b,color:#fff
    style C2 fill:#ff6b6b,color:#fff
    style E2 fill:#ff6b6b,color:#fff
    
    style B2 fill:#ffd43b,color:#000
    style D2 fill:#ffd43b,color:#000
    style F2 fill:#ffd43b,color:#000
    style G2 fill:#ffd43b,color:#000
    style H2 fill:#ffd43b,color:#000
    style I2 fill:#ffd43b,color:#000
    style J2 fill:#ffd43b,color:#000
    style K2 fill:#ffd43b,color:#000
    style L2 fill:#ffd43b,color:#000
    
    style M2 fill:#51cf66,color:#fff
    style N2 fill:#51cf66,color:#fff
    style O2 fill:#51cf66,color:#fff
    style P2 fill:#51cf66,color:#fff
    style Q2 fill:#51cf66,color:#fff
    style R2 fill:#51cf66,color:#fff
    style S2 fill:#51cf66,color:#fff
    style T2 fill:#51cf66,color:#fff
    style U2 fill:#51cf66,color:#fff
    style V2 fill:#51cf66,color:#fff
    style W2 fill:#51cf66,color:#fff
    style X2 fill:#51cf66,color:#fff
    style Y2 fill:#51cf66,color:#fff
    
    style Z2 fill:#b197fc,color:#fff
            </div>
            <div class="figure-caption">
                <strong>Figure 2.</strong> Electronic transitions process illustrating state transitions, excitation analysis, and quantum efficiency.
            </div>
        </div>

        <div class="process-title">Process 3: Computational Methods</div>
        <div class="figure">
            <div class="mermaid">
graph TD
    A3[Molecular System] --> B3[Computational Method Selection]
    C3[Quantum Theory] --> D3[Algorithm Implementation]
    E3[Computational Resources] --> F3[Calculation Setup]
    
    B3 --> G3[Method Selection]
    D3 --> H3[Algorithm Development]
    F3 --> I3[Resource Allocation]
    
    G3 --> J3[DFT Selection]
    H3 --> K3[Code Implementation]
    I3 --> L3[Computational Parameters]
    
    J3 --> M3[Functional Selection]
    K3 --> L3
    L3 --> N3[Calculation Execution]
    
    M3 --> O3[Electronic Structure]
    N3 --> P3[Quantum Calculation]
    O3 --> Q3[Computational Analysis]
    
    P3 --> R3[Energy Calculation]
    Q3 --> S3[Property Analysis]
    R3 --> T3[Molecular Properties]
    
    S3 --> U3[Accuracy Assessment]
    T3 --> V3[Property Validation]
    U3 --> W3[Computational Efficiency]
    
    V3 --> X3[Result Characterization]
    W3 --> Y3[Process Optimization]
    X3 --> Z3[Final Computational Results]
    
    Y3 --> Z3
    
    style A3 fill:#ff6b6b,color:#fff
    style C3 fill:#ff6b6b,color:#fff
    style E3 fill:#ff6b6b,color:#fff
    
    style B3 fill:#ffd43b,color:#000
    style D3 fill:#ffd43b,color:#000
    style F3 fill:#ffd43b,color:#000
    style G3 fill:#ffd43b,color:#000
    style H3 fill:#ffd43b,color:#000
    style I3 fill:#ffd43b,color:#000
    style J3 fill:#ffd43b,color:#000
    style K3 fill:#ffd43b,color:#000
    style L3 fill:#ffd43b,color:#000
    
    style M3 fill:#51cf66,color:#fff
    style N3 fill:#51cf66,color:#fff
    style O3 fill:#51cf66,color:#fff
    style P3 fill:#51cf66,color:#fff
    style Q3 fill:#51cf66,color:#fff
    style R3 fill:#51cf66,color:#fff
    style S3 fill:#51cf66,color:#fff
    style T3 fill:#51cf66,color:#fff
    style U3 fill:#51cf66,color:#fff
    style V3 fill:#51cf66,color:#fff
    style W3 fill:#51cf66,color:#fff
    style X3 fill:#51cf66,color:#fff
    style Y3 fill:#51cf66,color:#fff
    
    style Z3 fill:#b197fc,color:#fff
            </div>
            <div class="figure-caption">
                <strong>Figure 3.</strong> Computational methods process showing algorithm implementation, quantum calculation, and computational efficiency.
            </div>
        </div>

        <div class="process-title">Process 4: Reaction Pathways</div>
        <div class="figure">
            <div class="mermaid">
graph TD
    A4[Reactant State] --> B4[Reaction Pathway Method]
    C4[Transition States] --> D4[Energy Surface Analysis]
    E4[Product State] --> F4[Pathway Calculation]
    
    B4 --> G4[Pathway Identification]
    D4 --> H4[Energy Surface Mapping]
    F4 --> I4[Reaction Coordinate]
    
    G4 --> J4[Initial State]
    H4 --> K4[Energy Barriers]
    I4 --> L4[Coordinate Analysis]
    
    J4 --> M4[Reaction Initiation]
    K4 --> L4
    L4 --> N4[Transition State]
    
    M4 --> O4[Pathway Evolution]
    N4 --> P4[Reaction Progress]
    O4 --> Q4[Quantum Analysis]
    
    P4 --> R4[Product Formation]
    Q4 --> S4[Pathway Analysis]
    R4 --> T4[Reaction Properties]
    
    S4 --> U4[Barrier Analysis]
    T4 --> V4[Property Calculation]
    U4 --> W4[Pathway Efficiency]
    
    V4 --> X4[Reaction Characterization]
    W4 --> Y4[Process Optimization]
    X4 --> Z4[Final Reaction Pathway]
    
    Y4 --> Z4
    
    style A4 fill:#ff6b6b,color:#fff
    style C4 fill:#ff6b6b,color:#fff
    style E4 fill:#ff6b6b,color:#fff
    
    style B4 fill:#ffd43b,color:#000
    style D4 fill:#ffd43b,color:#000
    style F4 fill:#ffd43b,color:#000
    style G4 fill:#ffd43b,color:#000
    style H4 fill:#ffd43b,color:#000
    style I4 fill:#ffd43b,color:#000
    style J4 fill:#ffd43b,color:#000
    style K4 fill:#ffd43b,color:#000
    style L4 fill:#ffd43b,color:#000
    
    style M4 fill:#51cf66,color:#fff
    style N4 fill:#51cf66,color:#fff
    style O4 fill:#51cf66,color:#fff
    style P4 fill:#51cf66,color:#fff
    style Q4 fill:#51cf66,color:#fff
    style R4 fill:#51cf66,color:#fff
    style S4 fill:#51cf66,color:#fff
    style T4 fill:#51cf66,color:#fff
    style U4 fill:#51cf66,color:#fff
    style V4 fill:#51cf66,color:#fff
    style W4 fill:#51cf66,color:#fff
    style X4 fill:#51cf66,color:#fff
    style Y4 fill:#51cf66,color:#fff
    
    style Z4 fill:#b197fc,color:#fff
            </div>
            <div class="figure-caption">
                <strong>Figure 4.</strong> Reaction pathways process showing transition states, energy barriers, and pathway optimization.
            </div>
        </div>

        <div class="process-title">Process 5: Spectroscopic Calculations</div>
        <div class="figure">
            <div class="mermaid">
graph TD
    A5[Molecular System] --> B5[Spectroscopic Calculation Method]
    C5[Quantum States] --> D5[Transition Analysis]
    E5[Spectroscopic Properties] --> F5[Calculation Setup]
    
    B5 --> G5[State Preparation]
    D5 --> H5[Transition Selection]
    F5 --> I5[Computational Parameters]
    
    G5 --> J5[Initial State]
    H5 --> K5[Transition Rules]
    I5 --> L5[Calculation Setup]
    
    J5 --> M5[State Characterization]
    K5 --> L5
    L5 --> N5[Spectroscopic Calculation]
    
    M5 --> O5[Property Calculation]
    N5 --> P5[Transition Analysis]
    O5 --> Q5[Quantum Analysis]
    
    P5 --> R5[Spectroscopic Properties]
    Q5 --> S5[Property Analysis]
    R5 --> T5[Spectroscopic Features]
    
    S5 --> U5[Intensity Calculation]
    T5 --> V5[Feature Analysis]
    U5 --> W5[Spectroscopic Efficiency]
    
    V5 --> X5[Spectroscopic Characterization]
    W5 --> Y5[Process Optimization]
    X5 --> Z5[Final Spectroscopic Properties]
    
    Y5 --> Z5
    
    style A5 fill:#ff6b6b,color:#fff
    style C5 fill:#ff6b6b,color:#fff
    style E5 fill:#ff6b6b,color:#fff
    
    style B5 fill:#ffd43b,color:#000
    style D5 fill:#ffd43b,color:#000
    style F5 fill:#ffd43b,color:#000
    style G5 fill:#ffd43b,color:#000
    style H5 fill:#ffd43b,color:#000
    style I5 fill:#ffd43b,color:#000
    style J5 fill:#ffd43b,color:#000
    style K5 fill:#ffd43b,color:#000
    style L5 fill:#ffd43b,color:#000
    
    style M5 fill:#51cf66,color:#fff
    style N5 fill:#51cf66,color:#fff
    style O5 fill:#51cf66,color:#fff
    style P5 fill:#51cf66,color:#fff
    style Q5 fill:#51cf66,color:#fff
    style R5 fill:#51cf66,color:#fff
    style S5 fill:#51cf66,color:#fff
    style T5 fill:#51cf66,color:#fff
    style U5 fill:#51cf66,color:#fff
    style V5 fill:#51cf66,color:#fff
    style W5 fill:#51cf66,color:#fff
    style X5 fill:#51cf66,color:#fff
    style Y5 fill:#51cf66,color:#fff
    
    style Z5 fill:#b197fc,color:#fff
            </div>
            <div class="figure-caption">
                <strong>Figure 5.</strong> Spectroscopic calculations process showing transition analysis, property calculation, and spectroscopic efficiency.
            </div>
        </div>

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        </div>

        <p style="margin-bottom: 0.5rem;"><strong>Gary Welz</strong></p>
        <p style="margin-bottom: 0.5rem;">Retired Faculty Member</p>
        <p style="margin-bottom: 0.5rem;">John Jay College, CUNY (Department of Mathematics and Computer Science)</p>
        <p style="margin-bottom: 0.5rem;">Borough of Manhattan Community College, CUNY</p>
        <p style="margin-bottom: 0.5rem;">CUNY Graduate Center (New Media Lab)</p>
        <p style="margin-bottom: 0.5rem;">Email: gwelz@jjay.cuny.edu</p>
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