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import math
import warnings
from pathlib import Path
import matplotlib.pyplot as plt
import numpy as np
import torch
from utils import TryExcept, threaded
def fitness(x):
# Model fitness as a weighted combination of metrics
w = [0.0, 0.0, 0.1, 0.9] # weights for [P, R, mAP@0.5, mAP@0.5:0.95]
return (x[:, :4] * w).sum(1)
def smooth(y, f=0.05):
# Box filter of fraction f
nf = round(len(y) * f * 2) // 2 + 1 # number of filter elements (must be odd)
p = np.ones(nf // 2) # ones padding
yp = np.concatenate((p * y[0], y, p * y[-1]), 0) # y padded
return np.convolve(yp, np.ones(nf) / nf, mode='valid') # y-smoothed
def ap_per_class(tp, conf, pred_cls, target_cls, plot=False, save_dir='.', names=(), eps=1e-16, prefix=""):
""" Compute the average precision, given the recall and precision curves.
Source: https://github.com/rafaelpadilla/Object-Detection-Metrics.
# Arguments
tp: True positives (nparray, nx1 or nx10).
conf: Objectness value from 0-1 (nparray).
pred_cls: Predicted object classes (nparray).
target_cls: True object classes (nparray).
plot: Plot precision-recall curve at mAP@0.5
save_dir: Plot save directory
# Returns
The average precision as computed in py-faster-rcnn.
"""
# Sort by objectness
i = np.argsort(-conf)
tp, conf, pred_cls = tp[i], conf[i], pred_cls[i]
# Find unique classes
unique_classes, nt = np.unique(target_cls, return_counts=True)
nc = unique_classes.shape[0] # number of classes, number of detections
# Create Precision-Recall curve and compute AP for each class
px, py = np.linspace(0, 1, 1000), [] # for plotting
ap, p, r = np.zeros((nc, tp.shape[1])), np.zeros((nc, 1000)), np.zeros((nc, 1000))
for ci, c in enumerate(unique_classes):
i = pred_cls == c
n_l = nt[ci] # number of labels
n_p = i.sum() # number of predictions
if n_p == 0 or n_l == 0:
continue
# Accumulate FPs and TPs
fpc = (1 - tp[i]).cumsum(0)
tpc = tp[i].cumsum(0)
# Recall
recall = tpc / (n_l + eps) # recall curve
r[ci] = np.interp(-px, -conf[i], recall[:, 0], left=0) # negative x, xp because xp decreases
# Precision
precision = tpc / (tpc + fpc) # precision curve
p[ci] = np.interp(-px, -conf[i], precision[:, 0], left=1) # p at pr_score
# AP from recall-precision curve
for j in range(tp.shape[1]):
ap[ci, j], mpre, mrec = compute_ap(recall[:, j], precision[:, j])
if plot and j == 0:
py.append(np.interp(px, mrec, mpre)) # precision at mAP@0.5
# Compute F1 (harmonic mean of precision and recall)
f1 = 2 * p * r / (p + r + eps)
names = [v for k, v in names.items() if k in unique_classes] # list: only classes that have data
names = dict(enumerate(names)) # to dict
if plot:
plot_pr_curve(px, py, ap, Path(save_dir) / f'{prefix}PR_curve.png', names)
plot_mc_curve(px, f1, Path(save_dir) / f'{prefix}F1_curve.png', names, ylabel='F1')
plot_mc_curve(px, p, Path(save_dir) / f'{prefix}P_curve.png', names, ylabel='Precision')
plot_mc_curve(px, r, Path(save_dir) / f'{prefix}R_curve.png', names, ylabel='Recall')
i = smooth(f1.mean(0), 0.1).argmax() # max F1 index
p, r, f1 = p[:, i], r[:, i], f1[:, i]
tp = (r * nt).round() # true positives
fp = (tp / (p + eps) - tp).round() # false positives
return tp, fp, p, r, f1, ap, unique_classes.astype(int)
def compute_ap(recall, precision):
""" Compute the average precision, given the recall and precision curves
# Arguments
recall: The recall curve (list)
precision: The precision curve (list)
# Returns
Average precision, precision curve, recall curve
"""
# Append sentinel values to beginning and end
mrec = np.concatenate(([0.0], recall, [1.0]))
mpre = np.concatenate(([1.0], precision, [0.0]))
# Compute the precision envelope
mpre = np.flip(np.maximum.accumulate(np.flip(mpre)))
# Integrate area under curve
method = 'interp' # methods: 'continuous', 'interp'
if method == 'interp':
x = np.linspace(0, 1, 101) # 101-point interp (COCO)
ap = np.trapz(np.interp(x, mrec, mpre), x) # integrate
else: # 'continuous'
i = np.where(mrec[1:] != mrec[:-1])[0] # points where x axis (recall) changes
ap = np.sum((mrec[i + 1] - mrec[i]) * mpre[i + 1]) # area under curve
return ap, mpre, mrec
class ConfusionMatrix:
# Updated version of https://github.com/kaanakan/object_detection_confusion_matrix
def __init__(self, nc, conf=0.25, iou_thres=0.45):
self.matrix = np.zeros((nc + 1, nc + 1))
self.nc = nc # number of classes
self.conf = conf
self.iou_thres = iou_thres
def process_batch(self, detections, labels):
"""
Return intersection-over-union (Jaccard index) of boxes.
Both sets of boxes are expected to be in (x1, y1, x2, y2) format.
Arguments:
detections (Array[N, 6]), x1, y1, x2, y2, conf, class
labels (Array[M, 5]), class, x1, y1, x2, y2
Returns:
None, updates confusion matrix accordingly
"""
if detections is None:
gt_classes = labels.int()
for gc in gt_classes:
self.matrix[self.nc, gc] += 1 # background FN
return
detections = detections[detections[:, 4] > self.conf]
gt_classes = labels[:, 0].int()
detection_classes = detections[:, 5].int()
iou = box_iou(labels[:, 1:], detections[:, :4])
x = torch.where(iou > self.iou_thres)
if x[0].shape[0]:
matches = torch.cat((torch.stack(x, 1), iou[x[0], x[1]][:, None]), 1).cpu().numpy()
if x[0].shape[0] > 1:
matches = matches[matches[:, 2].argsort()[::-1]]
matches = matches[np.unique(matches[:, 1], return_index=True)[1]]
matches = matches[matches[:, 2].argsort()[::-1]]
matches = matches[np.unique(matches[:, 0], return_index=True)[1]]
else:
matches = np.zeros((0, 3))
n = matches.shape[0] > 0
m0, m1, _ = matches.transpose().astype(int)
for i, gc in enumerate(gt_classes):
j = m0 == i
if n and sum(j) == 1:
self.matrix[detection_classes[m1[j]], gc] += 1 # correct
else:
self.matrix[self.nc, gc] += 1 # true background
if n:
for i, dc in enumerate(detection_classes):
if not any(m1 == i):
self.matrix[dc, self.nc] += 1 # predicted background
def matrix(self):
return self.matrix
def tp_fp(self):
tp = self.matrix.diagonal() # true positives
fp = self.matrix.sum(1) - tp # false positives
# fn = self.matrix.sum(0) - tp # false negatives (missed detections)
return tp[:-1], fp[:-1] # remove background class
@TryExcept('WARNING ⚠️ ConfusionMatrix plot failure')
def plot(self, normalize=True, save_dir='', names=()):
import seaborn as sn
array = self.matrix / ((self.matrix.sum(0).reshape(1, -1) + 1E-9) if normalize else 1) # normalize columns
array[array < 0.005] = np.nan # don't annotate (would appear as 0.00)
fig, ax = plt.subplots(1, 1, figsize=(12, 9), tight_layout=True)
nc, nn = self.nc, len(names) # number of classes, names
sn.set(font_scale=1.0 if nc < 50 else 0.8) # for label size
labels = (0 < nn < 99) and (nn == nc) # apply names to ticklabels
ticklabels = (names + ['background']) if labels else "auto"
with warnings.catch_warnings():
warnings.simplefilter('ignore') # suppress empty matrix RuntimeWarning: All-NaN slice encountered
sn.heatmap(array,
ax=ax,
annot=nc < 30,
annot_kws={
"size": 8},
cmap='Blues',
fmt='.2f',
square=True,
vmin=0.0,
xticklabels=ticklabels,
yticklabels=ticklabels).set_facecolor((1, 1, 1))
ax.set_ylabel('True')
ax.set_ylabel('Predicted')
ax.set_title('Confusion Matrix')
fig.savefig(Path(save_dir) / 'confusion_matrix.png', dpi=250)
plt.close(fig)
def print(self):
for i in range(self.nc + 1):
print(' '.join(map(str, self.matrix[i])))
class WIoU_Scale:
''' monotonous: {
None: origin v1
True: monotonic FM v2
False: non-monotonic FM v3
}
momentum: The momentum of running mean'''
iou_mean = 1.
monotonous = False
_momentum = 1 - 0.5 ** (1 / 7000)
_is_train = True
def __init__(self, iou):
self.iou = iou
self._update(self)
@classmethod
def _update(cls, self):
if cls._is_train: cls.iou_mean = (1 - cls._momentum) * cls.iou_mean + \
cls._momentum * self.iou.detach().mean().item()
@classmethod
def _scaled_loss(cls, self, gamma=1.9, delta=3):
if isinstance(self.monotonous, bool):
if self.monotonous:
return (self.iou.detach() / self.iou_mean).sqrt()
else:
beta = self.iou.detach() / self.iou_mean
alpha = delta * torch.pow(gamma, beta - delta)
return beta / alpha
return 1
def bbox_iou(box1, box2, xywh=True, GIoU=False, DIoU=False, CIoU=False, MDPIoU=False, feat_h=640, feat_w=640, eps=1e-7):
# Returns Intersection over Union (IoU) of box1(1,4) to box2(n,4)
# Get the coordinates of bounding boxes
if xywh: # transform from xywh to xyxy
(x1, y1, w1, h1), (x2, y2, w2, h2) = box1.chunk(4, -1), box2.chunk(4, -1)
w1_, h1_, w2_, h2_ = w1 / 2, h1 / 2, w2 / 2, h2 / 2
b1_x1, b1_x2, b1_y1, b1_y2 = x1 - w1_, x1 + w1_, y1 - h1_, y1 + h1_
b2_x1, b2_x2, b2_y1, b2_y2 = x2 - w2_, x2 + w2_, y2 - h2_, y2 + h2_
else: # x1, y1, x2, y2 = box1
b1_x1, b1_y1, b1_x2, b1_y2 = box1.chunk(4, -1)
b2_x1, b2_y1, b2_x2, b2_y2 = box2.chunk(4, -1)
w1, h1 = b1_x2 - b1_x1, b1_y2 - b1_y1 + eps
w2, h2 = b2_x2 - b2_x1, b2_y2 - b2_y1 + eps
# Intersection area
inter = (torch.min(b1_x2, b2_x2) - torch.max(b1_x1, b2_x1)).clamp(0) * \
(torch.min(b1_y2, b2_y2) - torch.max(b1_y1, b2_y1)).clamp(0)
# Union Area
union = w1 * h1 + w2 * h2 - inter + eps
# IoU
iou = inter / union
if CIoU or DIoU or GIoU:
cw = torch.max(b1_x2, b2_x2) - torch.min(b1_x1, b2_x1) # convex (smallest enclosing box) width
ch = torch.max(b1_y2, b2_y2) - torch.min(b1_y1, b2_y1) # convex height
if CIoU or DIoU: # Distance or Complete IoU https://arxiv.org/abs/1911.08287v1
c2 = cw ** 2 + ch ** 2 + eps # convex diagonal squared
rho2 = ((b2_x1 + b2_x2 - b1_x1 - b1_x2) ** 2 + (b2_y1 + b2_y2 - b1_y1 - b1_y2) ** 2) / 4 # center dist ** 2
if CIoU: # https://github.com/Zzh-tju/DIoU-SSD-pytorch/blob/master/utils/box/box_utils.py#L47
v = (4 / math.pi ** 2) * torch.pow(torch.atan(w2 / h2) - torch.atan(w1 / h1), 2)
with torch.no_grad():
alpha = v / (v - iou + (1 + eps))
return iou - (rho2 / c2 + v * alpha) # CIoU
return iou - rho2 / c2 # DIoU
c_area = cw * ch + eps # convex area
return iou - (c_area - union) / c_area # GIoU https://arxiv.org/pdf/1902.09630.pdf
elif MDPIoU:
d1 = (b2_x1 - b1_x1) ** 2 + (b2_y1 - b1_y1) ** 2
d2 = (b2_x2 - b1_x2) ** 2 + (b2_y2 - b1_y2) ** 2
mpdiou_hw_pow = feat_h ** 2 + feat_w ** 2
return iou - d1 / mpdiou_hw_pow - d2 / mpdiou_hw_pow # MPDIoU
return iou # IoU
def box_iou(box1, box2, eps=1e-7):
# https://github.com/pytorch/vision/blob/master/torchvision/ops/boxes.py
"""
Return intersection-over-union (Jaccard index) of boxes.
Both sets of boxes are expected to be in (x1, y1, x2, y2) format.
Arguments:
box1 (Tensor[N, 4])
box2 (Tensor[M, 4])
Returns:
iou (Tensor[N, M]): the NxM matrix containing the pairwise
IoU values for every element in boxes1 and boxes2
"""
# inter(N,M) = (rb(N,M,2) - lt(N,M,2)).clamp(0).prod(2)
(a1, a2), (b1, b2) = box1.unsqueeze(1).chunk(2, 2), box2.unsqueeze(0).chunk(2, 2)
inter = (torch.min(a2, b2) - torch.max(a1, b1)).clamp(0).prod(2)
# IoU = inter / (area1 + area2 - inter)
return inter / ((a2 - a1).prod(2) + (b2 - b1).prod(2) - inter + eps)
def bbox_ioa(box1, box2, eps=1e-7):
"""Returns the intersection over box2 area given box1, box2. Boxes are x1y1x2y2
box1: np.array of shape(nx4)
box2: np.array of shape(mx4)
returns: np.array of shape(nxm)
"""
# Get the coordinates of bounding boxes
b1_x1, b1_y1, b1_x2, b1_y2 = box1.T
b2_x1, b2_y1, b2_x2, b2_y2 = box2.T
# Intersection area
inter_area = (np.minimum(b1_x2[:, None], b2_x2) - np.maximum(b1_x1[:, None], b2_x1)).clip(0) * \
(np.minimum(b1_y2[:, None], b2_y2) - np.maximum(b1_y1[:, None], b2_y1)).clip(0)
# box2 area
box2_area = (b2_x2 - b2_x1) * (b2_y2 - b2_y1) + eps
# Intersection over box2 area
return inter_area / box2_area
def wh_iou(wh1, wh2, eps=1e-7):
# Returns the nxm IoU matrix. wh1 is nx2, wh2 is mx2
wh1 = wh1[:, None] # [N,1,2]
wh2 = wh2[None] # [1,M,2]
inter = torch.min(wh1, wh2).prod(2) # [N,M]
return inter / (wh1.prod(2) + wh2.prod(2) - inter + eps) # iou = inter / (area1 + area2 - inter)
# Plots ----------------------------------------------------------------------------------------------------------------
@threaded
def plot_pr_curve(px, py, ap, save_dir=Path('pr_curve.png'), names=()):
# Precision-recall curve
fig, ax = plt.subplots(1, 1, figsize=(9, 6), tight_layout=True)
py = np.stack(py, axis=1)
if 0 < len(names) < 21: # display per-class legend if < 21 classes
for i, y in enumerate(py.T):
ax.plot(px, y, linewidth=1, label=f'{names[i]} {ap[i, 0]:.3f}') # plot(recall, precision)
else:
ax.plot(px, py, linewidth=1, color='grey') # plot(recall, precision)
ax.plot(px, py.mean(1), linewidth=3, color='blue', label='all classes %.3f mAP@0.5' % ap[:, 0].mean())
ax.set_xlabel('Recall')
ax.set_ylabel('Precision')
ax.set_xlim(0, 1)
ax.set_ylim(0, 1)
ax.legend(bbox_to_anchor=(1.04, 1), loc="upper left")
ax.set_title('Precision-Recall Curve')
fig.savefig(save_dir, dpi=250)
plt.close(fig)
@threaded
def plot_mc_curve(px, py, save_dir=Path('mc_curve.png'), names=(), xlabel='Confidence', ylabel='Metric'):
# Metric-confidence curve
fig, ax = plt.subplots(1, 1, figsize=(9, 6), tight_layout=True)
if 0 < len(names) < 21: # display per-class legend if < 21 classes
for i, y in enumerate(py):
ax.plot(px, y, linewidth=1, label=f'{names[i]}') # plot(confidence, metric)
else:
ax.plot(px, py.T, linewidth=1, color='grey') # plot(confidence, metric)
y = smooth(py.mean(0), 0.05)
ax.plot(px, y, linewidth=3, color='blue', label=f'all classes {y.max():.2f} at {px[y.argmax()]:.3f}')
ax.set_xlabel(xlabel)
ax.set_ylabel(ylabel)
ax.set_xlim(0, 1)
ax.set_ylim(0, 1)
ax.legend(bbox_to_anchor=(1.04, 1), loc="upper left")
ax.set_title(f'{ylabel}-Confidence Curve')
fig.savefig(save_dir, dpi=250)
plt.close(fig)
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