warning fix
d77f54b
Andrew Stirn
commited on
Spaces:
Running
on
CPU Upgrade
Running
on
CPU Upgrade
Commit History
bug fix
81661d3
Andrew Stirn
commited on
bug fix
50f9a1a
Andrew Stirn
commited on
Merge remote-tracking branch 'origin/main' into unit-interval
d32c3b9
Andrew Stirn
commited on
cleanup
254e93b
Andrew Stirn
commited on
cleanup
7c87ab2
Andrew Stirn
commited on
progress
da98162
Andrew Stirn
commited on
web tool titration clipping slightly wider than testing
d99c64e
Andrew Stirn
commited on
moved titration ratio function to web code
47e7aeb
Andrew Stirn
commited on
progress
e78fda7
Andrew Stirn
commited on
progress
af865b9
Andrew Stirn
commited on
back to UnitVariance tiger_trainer.py
b8b2c54
Andrew Stirn
commited on
unit-interval tiger model with web tool output transformation
cf79aee
Andrew Stirn
commited on
Update README.md
84567e0
updated .gitignore
ecfb07a
Andrew Stirn
commited on
minor fix
fda1178
Andrew Stirn
commited on
ability to run locally
a2591b6
Andrew Stirn
commited on
Get rid of on target ID and rename guide
27992d2
eric
commited on
prevent empty off target crash
c650039
eric
commited on
Merge branch 'main' of https://huggingface.co/spaces/Knowles-Lab/tiger into main
56f2fde
eric
commited on
prevent crash when off target is empty and add option for on target only
99a0d01
eric
commited on
Merge branch 'main' of https://huggingface.co/spaces/Knowles-Lab/tiger into main
6009ef4
Andrew Stirn
commited on
flip guide sequences for biologists
8c452e8
Andrew Stirn
commited on
Cleaning up previous fasta files
9f169cd
eric
commited on
Handle fasta file input seperately
d3204b1
eric
commited on
enable status bar
89ee386
eric
commited on
missed fix
6216d88
Andrew Stirn
commited on
updated .gitignore
e0618e1
Andrew Stirn
commited on
memory leak plugged
0450f78
Andrew Stirn
commited on
updated .gitignore
53c486e
Andrew Stirn
commited on
corrections
6727689
Andrew Stirn
commited on
fasta directory optimizations
f311bf4
Andrew Stirn
commited on
support for app
89ffb34
Andrew Stirn
commited on
find top guides for all transcripts and then scan off-targets simultaneously
f57c1f6
Andrew Stirn
commited on
load_transcripts function
d78d0d1
Andrew Stirn
commited on
Upload gencode.v19.lncRNA_transcripts.fa.gz
82425ea
off-targets for gencode.v19.lncRNA_transcripts.fa.gz
e38af10
Andrew Stirn
commited on
insufficient target context cases handled
a690e02
Andrew Stirn
commited on
back to old test case
cbbf8c9
Andrew Stirn
commited on
len = 26 bug
1e16292
Andrew Stirn
commited on
no off-target bug
350befe
Andrew Stirn
commited on
sorted off-target
6ec253f
Andrew Stirn
commited on
cleanup
3a14dfb
Andrew Stirn
commited on
cleanup
18c6cc8
Andrew Stirn
commited on
rounding error
73c24bb
Andrew Stirn
commited on
MVP
d41b7db
Andrew Stirn
commited on
off-target predictions
de06d10
Andrew Stirn
commited on
cleanup
2bc5b93
Andrew Stirn
commited on
cleanup
4e66e6b
Andrew Stirn
commited on
default test case
592b51c
Andrew Stirn
commited on