app.py

import os

import nltk
import yaml

import pandas as pd
import streamlit as st

from txtai.embeddings import Documents, Embeddings
from txtai.pipeline import Segmentation, Summary, Tabular, Textractor, Translation
from txtai.workflow import ServiceTask, Task, UrlTask, Workflow

class Process:

    @staticmethod
    @st.cache(ttl=60 * 60, max_entries=3, allow_output_mutation=True, show_spinner=False)
    def get(components, data):
        """
        Lookup or creates a new workflow process instance
        """

        process = Process(data)

        with st.spinner("Building workflow...."):
            process.build(components)

        return process
    
    def __init__(self, data):
        """
        Create new Process
        """

        self.components = {}

        self.pipelines = {}

        self. workflow = []

        self.embeddings = None
        self.documents = None
        self.data = data

    def build(self, components):
        """
        Builds a workflow using components
        """

        tasks = []
        for component in components:
            component = dict(component)
            wtype = component.pop("type")
            self.components[wtype] = component

            if wtype == "embeddings":
                self.embeddings = Embeddings({**component})
                self.documents = Documents()
                tasks.append(Task(self.documents.add, unpack=False))

            elif wtype == "segmentation":
                self.pipelines[wtype] = Segmentation(**self.components[wtype])
                tasks.append(Task(self.pipelines[wtype]))

            elif wtype == "service":
                tasks.append(ServiceTask(**self.components[wtype]))

            elif wtype == "summary":
                self.pipelines[wtype] = Summary(component.pop("path"))
                tasks.append(Task(lambda x: self.pipelines["summary"](x, **self.components["summary"])))

            elif wtype == "tabular":
                self.pipelines[wtype] = Tabular(**self.components[wtype])
                tasks.append(Task(self.pipelines[wtype]))

            elif wtype == "textractor":
                self.pipelines[wtype] = Textractor(**self.components[wtype])
                tasks.append(UrlTask(self.pipelines[wtype]))

            elif wtype == "translation":
                self.pipelines[wtype] = Translation()
                tasks.append(Task(lambda x: self.pipelines["translation"](x, **self.components["translation"])))

        self.workflow = Workflow(tasks)

    def run(self, data):
        """
        Runs a workflow using data as input
        """

        if data and self.workflow:
            # Builds tuples for embedding index
            if self.documents:
                data = [(x, element, None) for x, element in enumerate(data)]

            # Process workflow
            for result in self.workflow(data):
                if not self.documents:
                    st.write(result)

            # Build embedding index
            if self.documents:
                # Cache data
                self.data = list(self.documents)

                with st.spinner("Building embedding index...."):
                    self.embeddings.index(self.documents)
                    self.documents.close()
                
                # Clear workflow
                self.documents, self.pipelines, self.workflow = None, None, None

    def search(self, query):
        """
        Runs a search for query
        """
        if self.embeddings and query:
            st.markdown(
                """
            <style>
            table td:nth-child(1) {
                display: none
            }
            table th:nth-child(1) {
                display: none
            }
            table {text-align: left !important}
            </style>
            """,
                unsafe_allow_html=True,
            )

            limit = min(5, len(self.data))

            results = []
            for result in self.embeddings.search(query, limit):
                # Tuples are returned when an index doesn't have stored content
                if isinstance(result, tuple):
                    uid, score = result
                    results.append({"text": self.find(uid), "score": f"{score:.2}"})
                else:
                    if "id" in result and "text" in result:
                        result["text"] = self.content(result.pop("id"), result["text"])
                    if "score" in result and result["score"]:
                        result["score"] = f'{result["score"]:.2}'

                    results.append(result)

            df = pd.DataFrame(results)
            st.write(df.to_html(escape=False), unsafe_allow_html=True)

    def find(self, key):
        """
        Lookup record from cached data by uid key
        """

        # Lookup text by id
        text = [text for uid, text, _ in self.data if uid == key][0]
        return self.content(key, text)
    
    def content(self, uid, text):
        """
        Builds a content reference for uid and text
        """

        if uid and uid.lower().startswith("http"):
            return f"<a href='{uid}' rel='noopener noreferrer' target='blank'>{text}</a>"
        
        return text
    
class Application:
    """
    Main application
    """

    def __init__(self, directory):
        """
        Creates a new application
        """

        # Workflow configuration directory
        self.directory = directory

    def default(self, names):
        """
        Gets default workflow index
        """

        # Gets names as lowercase to match case sensitive
        lnames = [name.lower() for name in names]

        # Get default workflow param
        params = st.experimental_get_query_params()
        index = params.get("default")
        index = index[0].lower() if index else 0

        # Lookup index of workflow name, add 1 to account for "--"
        if index and index in lnames:
            return lnames.index(index) + 1
        
        # Workflow not found, default to index 0
        return 0
    
    def load(self, components):
        """
        Load an existing workflow file
        """

        with open(os.path.join(self.directory, "config.yml"), encoding="utf-8") as f:
            config = yaml.safe_load(f)

        names = [row["name"] for row in config]
        files = [row["file"] for row in config]

        selected = st.selectbox("Load workflow", ["--"] + names, self.default(names))
        if selected != "--":
            index = [x for x, name in enumerate(names) if name == selected][0]
            with open(os.path.join(self.directory, files[index]), encoding="utf-8") as f:
                workflow = yaml.safe_load(f)

            st.markdown("---")

            # Get tasks for first workflow
            tasks = list(workflow["workflow"].values())[0]["tasks"]
            selected = []

            for task in tasks:
                name = task.get("action", task.get("task"))
                if name in components:
                    selected.append(name)
                elif name in ["index", "upsert"]:
                    selected.append("embeddings")

            return (selected, workflow)
        
        return (None, None)
    
    def state(self, key):
        """
        Lookup a session state variable
        """

        if key in st.session_state:
            return st.session_state[key]
        
        return None
    
    def appsetting(self, workflow, name):
        """
        Looks up an application configuration setting
        """

        if workflow:
            config = workflow.get("app")
            if config:
                return config.get(name)
            
        return None
    
    def setting(self, config, name, default=None):
        """
        Looks up a component configuration settings
        """

        return config.get(name, default) if config else default
    
    def text(self, label, component, config, name, default=None):
        """
        Create a new text input field
        """

        default = self.setting(config, name, default)
        if not default:
            default = ""
        elif isinstance(default, list):
            default = ",".join(default)
        elif isinstance(default, dict):
            default = ",".join(default.keys())

        st.caption(label)
        st.code(default, language="yaml")
        return default
    
    def number(self, label, component, config, name, default=None):
        """
        Creates a new numeric input field
        """

        value = self.text(label, component, config, name, default)
        return int(value) if value else None
    
    def boolean(self, label, component, config, name, default=None):
        """
        Creates a new checkbox field
        """

        default = self.setting(config, name, default)

        st.caption(label)
        st.markdown(":white_check_mark:" if default else ":white_large_square:")
        return default
    
    def select(self, label, component, config, name, options, default=0):
        """
        Creates a new select box field
        """

        index = self.setting(config, name)
        index = [x for x, option in enumerate(options) if option == default]

        # Derive default index
        default = index[0] if index else default

        st.caption(label)
        st.code(options[default], language="yaml")
        return options[default]
    
    def split(self, text):
        """
        Splits text on commas and returns a list
        """

        return [x.strip() for x in text.split(",")]
    
    def options(self, component, workflow, index):
        """
        Extracts component settings into a component configuration dict
        """

        options = {"type": component}

        config = None
        if workflow:
            if component in ["service", "translation"]:
                tasks = list(workflow["workflow"].values())[0]["tasks"]
                tasks = [task for task in tasks if task.get("task") == component or task.get("action") == component]
                if tasks:
                    config = tasks[0]
            else:
                config = workflow.get(component)

        if component == "embeddings":
            st.markdown(f"** {index + 1}.) Embeddings Index**  \n*Index workflow output*")
            options["path"] = self.text("Embeddings model path", component, config, "path", "sentence-transformers/nli-mpnet-base-v2")
            options["upsert"] = self.boolean("Upsert", component, config, "upsert")
            options["content"] = self.boolean("Content", component, config, "content")

        elif component in ("segmentation", "textractor"):
            if component == "segmentation":
                st.markdown(f"** {index + 1}.) Segment**  \n*Split text into semantic units*")
            else:
                st.markdown(f"** {index + 1}.) Textract**  \n*Extract text from documents")

            options["sentences"] = self.boolean("Split sentences", component, config, "sentences")
            options["lines"] = self.boolean("Split lines", component, config, "lines")
            options["paragraphs"] = self.boolean("Split paragraphs", component, config, "paragraphs")
            options["joint"] = self.boolean("Join tokenized", component, config, "join")
            options["minlength"] = self.number("Min section length", component, config, "minlength")

        elif component == "service":
            st.markdown(f"** {index + 1}.) Service**  \n*Extract data from an API*")
            options["url"] = self.text("URL", component, config, "url")
            options["method"] = self.select("Method", component, config, "method", ["get", "post"], 0)
            options["params"] = self.text("URL parameters", component, config, "params")
            options["batch"] = self.boolean("Run as batch", component, config, "batch", True)
            options["extract"] = self.text("Subsection(s) to extract", component, config, "extract")

            if options["params"]:
                options["params"] = {key: None for key in self.split(options["params"])}
            if options["extract"]:
                options["extract"] = self.split(options["extract"])

        elif component == "summary":
            st.markdown(f"** {index + 1}.) Summary**  \n*Abstractive text summarization*")
            options["path"] = self.text("Model", component, config, "path", "sshleifer/distilbart-cnn-12-6")
            options["minlength"] = self.number("Min length", component, config, "minlength")
            options["maxlength"] = self.number("Max length", component, config, "maxlength")

        elif component == "tabular":
            st.markdown(f"** {index + 1}.) Tabular**  \n*Split tabular data into rows and columns*")
            options["idcolumn"] = self.text("Id columns", component, config, "idcolumn")
            options["textcolumns"] = self.text("Text columns", component, config, "textcolumns")
            options["content"] = self.text("Content", component, config, "content")

            if options["textcolumns"]:
                options["textcolumns"] = self.split(options["textcolumns"])

            if options["content"]:
                options["content"] = self.split(options["content"])
                if len(options["content"]) == 1 and options["content"][0] == "1":
                    options["content"] = options["content"][0]

        elif component == "translation":
            st.markdown(f"** {index + 1}.) Translate**  \n*Machine translation*")
            options["target"] = self.text("Target language code", component, config, "args", "en")

        st.markdown("---")

        return options
    
    def yaml(self, components):
        """
        Builds yaml string for components
        """

        data = {"app": {"data": self.state("data"), "query": self.state("query")}}
        tasks = []
        name = None

        for component in components:
            component = dict(component)
            name = wtype = component.pop("type")

            if wtype == "embeddings":
                upsert = component.pop("upsert")

                data[wtype] = component
                data["writable"] = True

                name = "index"
                tasks.append({"action": "upsert" if upsert else "index"})

            elif wtype == "segmentation":
                data[wtype] = component
                tasks.append({"action": wtype})

            elif wtype == "service":
                config = dict(**component)
                config["task"] = wtype
                tasks.append(config)

            elif wtype == "summary":
                data[wtype] = {"path": component.pop("path")}
                tasks.append({"action": wtype})

            elif wtype == "tabular":
                data[wtype] = component
                tasks.append({"action": wtype})

            elif wtype == "textractor":
                data[wtype] = component
                tasks.append({"action": wtype, "tasks": "url"})

            elif wtype == "translation":
                data[wtype] = component
                tasks.append({"action": wtype, "args": list(component.values())})

        # Add in workflow
        data["workflow"] = {name: {"tasks": tasks}}

        return (name, yaml.dump(data))
    
    def data(self, workflow):
        """
        Gets input data
        """

        # Get default data setting
        data = self.appsetting(workflow, "data")
        if not self.appsetting(workflow, "query"):
            data = st.text_input("Input", value=data)

        # Save data state
        st.session_state["data"] = data

        # Wrap data as list for workflow processing
        return [data]
    
    def query(self, workflow, index):
        """
        Gets input query
        """

        default = self.appsetting(workflow, "query")
        default = default if default else ""

        # Get query if this is an indexing workflow
        query = st.text_input("Query", value=default) if index else None

        # Save query state
        st.session_state["query"] = query

        return query
    
    def process(self, workflow, components, index):
        """
        Processes the current application action
        """

        # Get input data and initialize query
        data = self.data(workflow)
        query = self.query(workflow, index)

        # Get workflow process
        process = Process.get(components, data if index else None)

        # Run workflow process
        process.run(data)

        # Run search
        if index:
            process.search(query)

    def run(self):
        """
        Runs Streamlit application
        """

        with st.sidebar:
            st.markdown("# Workflow builder for Station  \n*Build and apply workflows to data about articles*  ")
            st.markdown("This is a demo for Station and the data used is from [Hugging Face](https://huggingface.co/datasets/ag_news/viewer/default/train).")
            st.markdown("---")

            # Component configuration
            components = ["embeddings", "segmentation", "service", "summary", "tabular", "textractor", "translation"]

            selected, workflow = self.load(components)
            if selected:
                # Get selected options
                components = [self.options(component, workflow, x) for x, component in enumerate(selected)]

        if selected:
            # Process current action
            self.process(workflow, components, "embeddings" in selected)

            with st.sidebar:
                # Generate export button after workflow is complete
                _, config = self.yaml(components)
                st.download_button("Export", config, file_name="workflow.yaml", help="Export the API workflow as YAML")
        else:
            st.info("Selected a workflow from the sidebar")

if __name__ == "__main__":
    os.environ["TOKENIZERS_PARALLELISM"] = "false"

    try:
        nltk.sent_tokenize("This is a test. Split")
    except:
        nltk.download("punkt")

    # Create and run application
    app = Application("workflows")
    app.run()