File size: 1,988 Bytes
c46b5cc
 
ff7f389
c46b5cc
 
 
 
 
6eedc9e
13e0c97
c46b5cc
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
25bba82
 
c46b5cc
 
 
 
 
 
 
 
 
 
 
 
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
---
library_name: scvi-tools
license: cc-by-4.0
tags:
- biology
- genomics
- single-cell
- model_cls_name:SCVI
- scvi_version:1.1.5
- anndata_version:0.10.8
- modality:rna
- annotated:False
---

# Description

scVI model trained on synthetic IID data and uploaded with no data.

# Model properties

Many model properties are in the model tags. Some more are listed below.

**model_init_params**:
```json
{
    "n_hidden": 128,
    "n_latent": 10,
    "n_layers": 1,
    "dropout_rate": 0.1,
    "dispersion": "gene",
    "gene_likelihood": "zinb",
    "latent_distribution": "normal"
}
```

**model_setup_anndata_args**:
```json
{
    "layer": null,
    "batch_key": null,
    "labels_key": null,
    "size_factor_key": null,
    "categorical_covariate_keys": null,
    "continuous_covariate_keys": null
}
```

**model_summary_stats**:
|     Summary Stat Key     | Value |
|--------------------------|-------|
|         n_batch          |   1   |
|         n_cells          |  400  |
| n_extra_categorical_covs |   0   |
| n_extra_continuous_covs  |   0   |
|         n_labels         |   1   |
|          n_vars          |  100  |

**model_data_registry**:
| Registry Key |    scvi-tools Location    |
|--------------|---------------------------|
|      X       |          adata.X          |
|    batch     | adata.obs['_scvi_batch']  |
|    labels    | adata.obs['_scvi_labels'] |

**model_parent_module**: scvi.model

**data_is_minified**: To be added...

# Training data

This is an optional link to where the training data is stored if it is too large
to host on the huggingface Model hub.

<!-- If your model is not uploaded with any data (e.g., minified data) on the Model Hub, then make
sure to provide this field if you want users to be able to access your training data. See the
scvi-tools documentation for details. -->

Training data url: N/A

# Training code

This is an optional link to the code used to train the model.

Training code url: N/A

# References

To be added...