Upload metadata.json with huggingface_hub
Browse files- metadata.json +31 -0
metadata.json
ADDED
@@ -0,0 +1,31 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
{
|
2 |
+
"popv_version": "0.5.0",
|
3 |
+
"anndata_version": "0.11.1",
|
4 |
+
"setup_dict": {
|
5 |
+
"ref_labels_key": "popv_labels",
|
6 |
+
"ref_batch_key": "batch_key",
|
7 |
+
"unknown_celltype_label": "unassigned"
|
8 |
+
},
|
9 |
+
"prediction_keys": [
|
10 |
+
"popv_celltypist_prediction",
|
11 |
+
"popv_knn_on_bbknn_prediction",
|
12 |
+
"popv_knn_on_harmony_prediction",
|
13 |
+
"popv_knn_on_scvi_prediction",
|
14 |
+
"popv_onclass_prediction",
|
15 |
+
"popv_scanvi_prediction",
|
16 |
+
"popv_svm_prediction",
|
17 |
+
"popv_xgboost_prediction"
|
18 |
+
],
|
19 |
+
"method_kwargs": {},
|
20 |
+
"methods": [
|
21 |
+
"celltypist",
|
22 |
+
"knn_on_bbknn",
|
23 |
+
"knn_on_harmony",
|
24 |
+
"knn_on_scvi",
|
25 |
+
"onclass",
|
26 |
+
"scanvi",
|
27 |
+
"svm",
|
28 |
+
"xgboost"
|
29 |
+
],
|
30 |
+
"cellxgene_url": "https://cellxgene.cziscience.com/e/b806712d-18b0-454c-a0fe-9909159e07c7.cxg/"
|
31 |
+
}
|