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---
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base_model: dmis-lab/biobert-base-cased-v1.2
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tags:
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- generated_from_trainer
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metrics:
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- precision
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- recall
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- f1
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- accuracy
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model-index:
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- name: BioBERT-full-finetuned-ner-pablo
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results: []
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---
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<!-- This model card has been generated automatically according to the information the Trainer had access to. You
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should probably proofread and complete it, then remove this comment. -->
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# BioBERT-full-finetuned-ner-pablo
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This model is a fine-tuned version of [dmis-lab/biobert-base-cased-v1.2](https://huggingface.co/dmis-lab/biobert-base-cased-v1.2) on the None dataset.
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It achieves the following results on the evaluation set:
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- Loss: 0.1114
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- Precision: 0.7951
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- Recall: 0.7809
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- F1: 0.7879
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- Accuracy: 0.9690
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## Model description
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More information needed
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## Intended uses & limitations
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More information needed
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## Training and evaluation data
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More information needed
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## Training procedure
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### Training hyperparameters
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The following hyperparameters were used during training:
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- learning_rate: 0.0002
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- train_batch_size: 4
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- eval_batch_size: 4
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- seed: 42
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- gradient_accumulation_steps: 4
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- total_train_batch_size: 16
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- optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08
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- lr_scheduler_type: linear
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- lr_scheduler_warmup_ratio: 0.05
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- num_epochs: 3
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- mixed_precision_training: Native AMP
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### Training results
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| Training Loss | Epoch | Step | Validation Loss | Precision | Recall | F1 | Accuracy |
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|:-------------:|:------:|:----:|:---------------:|:---------:|:------:|:------:|:--------:|
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| 0.1541 | 0.9998 | 2608 | 0.1456 | 0.6888 | 0.7147 | 0.7015 | 0.9601 |
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| 0.1073 | 2.0 | 5217 | 0.1244 | 0.7397 | 0.7450 | 0.7423 | 0.9645 |
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| 0.0744 | 2.9994 | 7824 | 0.1114 | 0.7951 | 0.7809 | 0.7879 | 0.9690 |
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### Framework versions
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- Transformers 4.44.0
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- Pytorch 2.4.0+cu124
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- Datasets 2.21.0
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- Tokenizers 0.19.1
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