File size: 658 Bytes
0d75654
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
from setuptools import setup

setup(
    name="geneformer",
    version="0.0.1",
    author="Christina Theodoris",
    author_email="christina.theodoris@gladstone.ucsf.edu",
    description="Geneformer is a transformer model pretrained \

                 on a large-scale corpus of ~30 million single \

                 cell transcriptomes to enable context-aware \

                 predictions in settings with limited data in \

                 network biology.",
    packages=["geneformer"],
    include_package_data=True,
    install_requires=[
        "datasets",
        "loompy",
        "numpy",
        "transformers",
    ],
)