pubmed_derived / README.md
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metadata
configs:
  - config_name: default
    data_files:
      - split: pubmed
        path: data/pubmed-*
      - split: nonbiomedical
        path: data/nonbiomedical-*
      - split: counterfactual
        path: data/counterfactual-*
      - split: casual
        path: data/casual-*
      - split: rap
        path: data/rap-*
dataset_info:
  features:
    - name: PubmedData
      struct:
        - name: ArticleIdList
          sequence:
            - name: ArticleId
              sequence: string
        - name: PublicationStatus
          dtype: string
        - name: History
          struct:
            - name: PubMedPubDate
              sequence:
                - name: Year
                  dtype: int32
                - name: Month
                  dtype: int32
                - name: Day
                  dtype: int32
        - name: ReferenceList
          sequence:
            - name: Citation
              dtype: string
            - name: CitationId
              dtype: int32
    - name: text
      dtype: string
  splits:
    - name: pubmed
      num_bytes: 1166668
      num_examples: 1000
    - name: nonbiomedical
      num_bytes: 1141909
      num_examples: 1000
    - name: counterfactual
      num_bytes: 1179347
      num_examples: 991
    - name: casual
      num_bytes: 1205949
      num_examples: 1000
    - name: rap
      num_bytes: 1252260
      num_examples: 1000
  download_size: 3357032
  dataset_size: 5946133
language:
  - en

A corpus of rewritten pubmed abstracts

This corpus contains a 1k example subset from the pubmed corpus and various rewritten versions. The rewritten versions change one aspect of the orginal text and keeps other aspects unchanged as much as possible.

Another corpus of rewritten general text is provided here: c4_derived

Data Splits

  • pubmed: a 1k example subset from the original pubmed corpus

  • nonbiomedical: main topic of text changed to nonbiomedical topic

  • counerfactual: factuals knowledge in text replaced by incorrect factuals

  • casual: style of text changed to a casual style

  • rap: style of text changed to a rap style

Dataset Creation

Text is generated by ChatGPT with corresponding prompts. Refer to the paper for the instructions used to generate text in each derived subsets.

Please check the terms and conditions of pubmed data here.

Citation Information

@inproceedings{
  zhang2024dissecting,
  title={Dissecting learning and forgetting in language model finetuning},
  author={Xiao Zhang and Ji Wu},
  booktitle={The Twelfth International Conference on Learning Representations},
  year={2024},
  url={https://openreview.net/forum?id=tmsqb6WpLz}
}