wiki_dpr / wiki_dpr.py
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import os
import pyarrow as pa
import pyarrow.parquet as pq
import datasets
logger = datasets.logging.get_logger(__name__)
_CITATION = """
@inproceedings{karpukhin-etal-2020-dense,
title = "Dense Passage Retrieval for Open-Domain Question Answering",
author = "Karpukhin, Vladimir and Oguz, Barlas and Min, Sewon and Lewis, Patrick and Wu, Ledell and Edunov, Sergey and Chen, Danqi and Yih, Wen-tau",
booktitle = "Proceedings of the 2020 Conference on Empirical Methods in Natural Language Processing (EMNLP)",
month = nov,
year = "2020",
address = "Online",
publisher = "Association for Computational Linguistics",
url = "https://www.aclweb.org/anthology/2020.emnlp-main.550",
doi = "10.18653/v1/2020.emnlp-main.550",
pages = "6769--6781",
}
"""
_DESCRIPTION = """
This is the wikipedia split used to evaluate the Dense Passage Retrieval (DPR) model.
It contains 21M passages from wikipedia along with their DPR embeddings.
The wikipedia articles were split into multiple, disjoint text blocks of 100 words as passages.
"""
_LICENSE = """DPR is CC-BY-NC 4.0 licensed."""
_DATA_TO_NUM_SHARDS = {
"nq": 157,
"multiset": 157,
"no_embeddings": 28,
"dummy.nq": 1,
"dummy.multiset": 1,
"dummy.no_embeddings": 1,
}
class WikiDprConfig(datasets.BuilderConfig):
"""BuilderConfig for WikiDprConfig."""
def __init__(
self,
with_embeddings=True,
with_index=True,
wiki_split="psgs_w100",
embeddings_name="nq",
index_name="compressed",
index_train_size=262144,
dummy=False,
**kwargs,
):
"""BuilderConfig for WikiSnippets.
Args:
with_embeddings (`bool`, defaults to `True`): Load the 768-dimensional embeddings from DPR.
with_index (`bool`, defaults to `True`): Load the faiss index trained on the embeddings.
wiki_split (`str`, defaults to `psgs_w100`): name of the splitting method of wiki articles.
embeddings_name (`str`, defaults to `nq`): "nq" or "multiset", depending on which dataset DPR was trained on.
index_name (`str`, defaults to `compressed`): "compressed" or "exact", the configuration of the faiss index to use.
index_train_size (`int`, defaults to `262144`): Size of the subset to use to train the index, if it is trainable.
dummy (`bool`, defaults to `False`): Dummy uses only 10 000 examples for testing purposes.
**kwargs: keyword arguments forwarded to super.
"""
self.with_embeddings = with_embeddings
self.with_index = with_index and index_name != "no_index"
self.wiki_split = wiki_split
self.embeddings_name = embeddings_name
self.index_name = index_name if with_index else "no_index"
self.index_train_size = index_train_size
self.dummy = dummy
name = [self.wiki_split, self.embeddings_name, self.index_name]
if not self.with_embeddings:
name.append("no_embeddings")
if self.dummy:
name = ["dummy"] + name
assert (
self.index_name != "compressed" or not self.with_index
), "Please use `index_name='exact' for dummy wiki_dpr`"
assert wiki_split == "psgs_w100"
assert embeddings_name in ("nq", "multiset")
assert index_name in ("compressed", "exact", "no_index")
kwargs["name"] = ".".join(name)
super(WikiDprConfig, self).__init__(**kwargs)
prefix = f"{wiki_split}.{embeddings_name}."
if self.index_name == "exact":
self.index_file = prefix + "HNSW128_SQ8-IP-{split}.faiss"
else:
self.index_file = prefix + "IVF4096_HNSW128_PQ128-IP-{split}.faiss"
if self.dummy:
self.index_file = "dummy." + self.index_file
class WikiDpr(datasets.ArrowBasedBuilder):
BUILDER_CONFIG_CLASS = WikiDprConfig
BUILDER_CONFIGS = [
WikiDprConfig(
embeddings_name=embeddings_name,
with_embeddings=with_embeddings,
index_name=index_name,
version=datasets.Version("0.0.0"),
)
for with_embeddings in (True, False)
for embeddings_name in ("nq", "multiset")
for index_name in ("exact", "compressed", "no_index")
]
def _info(self):
return datasets.DatasetInfo(
description=_DESCRIPTION,
features=datasets.Features(
{
"id": datasets.Value("string"),
"text": datasets.Value("string"),
"title": datasets.Value("string"),
"embeddings": datasets.Sequence(datasets.Value("float32")),
}
)
if self.config.with_embeddings
else datasets.Features(
{"id": datasets.Value("string"), "text": datasets.Value("string"), "title": datasets.Value("string")}
),
supervised_keys=None,
homepage="https://github.com/facebookresearch/DPR",
citation=_CITATION,
license=_LICENSE,
)
def _split_generators(self, dl_manager):
data_dir = self.config.embeddings_name if self.config.with_embeddings else "no_embeddings"
if self.config.dummy:
data_dir = "dummy." + data_dir
num_shards = _DATA_TO_NUM_SHARDS[data_dir]
data_dir = os.path.join("data", self.config.wiki_split, data_dir)
files = [os.path.join(data_dir, f"train-{i:05d}-of-{num_shards:05d}.parquet") for i in range(num_shards)]
downloaded_files = dl_manager.download_and_extract(files)
return [
datasets.SplitGenerator(name=datasets.Split.TRAIN, gen_kwargs={"files": downloaded_files}),
]
def _generate_tables(self, files):
for file in files:
with open(file, "rb") as f:
f = pq.ParquetFile(f)
for batch_idx, batch in enumerate(f.iter_batches(batch_size=1000)):
yield batch_idx, pa.Table.from_batches([batch])
batch_idx += 1
def _post_processing_resources(self, split):
if self.config.with_index:
return {"embeddings_index": self.config.index_file.format(split=split)}
else:
return {}
def _download_post_processing_resources(self, split, resource_name, dl_manager):
if resource_name == "embeddings_index":
try:
downloaded_resources = dl_manager.download_and_extract(
{"embeddings_index": os.path.join("index", self.config.index_file.format(split=split))}
)
return downloaded_resources["embeddings_index"]
except (FileNotFoundError, ConnectionError): # index doesn't exist
pass
def _post_process(self, dataset, resources_paths):
if self.config.with_index:
index_file = resources_paths["embeddings_index"]
if os.path.exists(index_file):
dataset.load_faiss_index("embeddings", index_file)
else:
if "embeddings" not in dataset.column_names:
raise ValueError("Couldn't build the index because there are no embeddings.")
import faiss
d = 768
train_size = self.config.index_train_size
logger.info("Building wiki_dpr faiss index")
if self.config.index_name == "exact":
index = faiss.IndexHNSWSQ(d, faiss.ScalarQuantizer.QT_8bit, 128, faiss.METRIC_INNER_PRODUCT)
index.hnsw.efConstruction = 200
index.hnsw.efSearch = 128
dataset.add_faiss_index("embeddings", custom_index=index, train_size=train_size)
else:
quantizer = faiss.IndexHNSWFlat(d, 128, faiss.METRIC_INNER_PRODUCT)
quantizer.hnsw.efConstruction = 200
quantizer.hnsw.efSearch = 128
ivf_index = faiss.IndexIVFPQ(quantizer, d, 4096, 128, 8, faiss.METRIC_INNER_PRODUCT)
ivf_index.nprobe = 64
ivf_index.own_fields = True
quantizer.this.disown()
dataset.add_faiss_index(
"embeddings",
train_size=train_size,
custom_index=ivf_index,
)
logger.info("Saving wiki_dpr faiss index")
dataset.save_faiss_index("embeddings", index_file)
return dataset