metadata
dataset_info:
features:
- name: '#genome'
dtype: string
- name: asm_name
dtype: string
- name: assembly_accession
dtype: string
- name: bioproject
dtype: string
- name: biosample
dtype: string
- name: wgs_master
dtype: float64
- name: seq_rel_date
dtype: string
- name: submitter
dtype: string
- name: ftp_path
dtype: string
- name: img_id
dtype: float64
- name: gtdb_id
dtype: string
- name: scope
dtype: string
- name: assembly_level
dtype: string
- name: genome_rep
dtype: string
- name: refseq_category
dtype: string
- name: release_type
dtype: string
- name: taxid
dtype: float64
- name: species_taxid
dtype: float64
- name: organism_name
dtype: string
- name: infraspecific_name
dtype: string
- name: isolate
dtype: string
- name: superkingdom
dtype: string
- name: phylum
dtype: string
- name: class
dtype: string
- name: order
dtype: string
- name: family
dtype: string
- name: genus
dtype: string
- name: species
dtype: string
- name: classified
dtype: bool
- name: lv1_group
dtype: string
- name: lv2_group
dtype: string
- name: score_faa
dtype: float64
- name: score_fna
dtype: float64
- name: score_rrna
dtype: float64
- name: score_trna
dtype: float64
- name: total_length
dtype: float64
- name: contigs
dtype: float64
- name: gc
dtype: float64
- name: n50
dtype: float64
- name: l50
dtype: float64
- name: proteins
dtype: float64
- name: protein_length
dtype: float64
- name: coding_density
dtype: float64
- name: completeness
dtype: float64
- name: contamination
dtype: float64
- name: strain_heterogeneity
dtype: float64
- name: markers
dtype: float64
- name: 5s_rrna
dtype: string
- name: 16s_rrna
dtype: string
- name: 23s_rrna
dtype: string
- name: trnas
dtype: float64
- name: draft_quality
dtype: string
- name: start_position
dtype: int64
- name: human_label
dtype: int64
- name: autotrain_text
dtype: string
- name: autotrain_label
dtype:
class_label:
names:
'0': Acetobacter pasteurianus IFO 3283-01 IFO 3283 substr. IFO 3283-01
'1': Alcanivorax borkumensis SK2
'2': Aquifex aeolicus VF5
'3': Archaeoglobus fulgidus DSM 4304
'4': Azorhizobium caulinodans ORS 571
'5': Bacillus anthracis str. Ames
'6': Bacillus anthracis str. Sterne ASM816v1
'7': Bacillus cereus ATCC 14579
'8': Bacillus clausii KSM-K16
'9': Bacillus pseudofirmus OF4
'10': Bacteroides fragilis YCH46
'11': Bacteroides thetaiotaomicron VPI-5482
'12': Bifidobacterium adolescentis ATCC 15703
'13': Bifidobacterium longum NCC2705
'14': Borrelia burgdorferi B31
'15': Brevibacillus brevis NBRC 100599
'16': Buchnera aphidicola str. Bp (Baizongia pistaciae)
'17': Buchnera aphidicola str. Sg (Schizaphis graminum) Sg
'18': Caldanaerobacter subterraneus subsp. tengcongensis MB4
'19': Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2
'20': Candidatus Vesicomyosocius okutanii HA
'21': Chlamydia felis Fe/C-56
'22': Chlamydia trachomatis D/UW-3/CX
'23': Chlamydophila caviae GPIC
'24': Chlamydophila pneumoniae CWL029
'25': Chlamydophila pneumoniae TW-183
'26': Chlorobium tepidum TLS
'27': Chromobacterium violaceum ATCC 12472
'28': Clostridioides difficile 630 ASM920v1
'29': Clostridium acetobutylicum ATCC 824
'30': Clostridium tetani E88 Massachusetts substr. E88
'31': Corynebacterium jeikeium K411 K411 = NCTC 11915
'32': Coxiella burnetii RSA 493 ASM776v1
'33': Deferribacter desulfuricans SSM1
'34': Dehalococcoides mccartyi CBDB1
'35': Deinococcus radiodurans R1 ASM856v1
'36': Desulfovibrio magneticus RS-1
'37': Enterococcus faecalis V583 ASM778v1
'38': Escherichia coli O157:H7 str. Sakai Sakai substr. RIMD 0509952
'39': Finegoldia magna ATCC 29328
'40': Francisella tularensis subsp. holarctica LVS ASM924v1
'41': Fusobacterium nucleatum subsp. nucleatum ATCC 25586
'42': Gemmatimonas aurantiaca T-27
'43': Geobacter sulfurreducens PCA
'44': Haemophilus ducreyi 35000HP
'45': Haloquadratum walsbyi DSM 16790 DSM 16790 = HBSQ001
'46': Helicobacter acinonychis str. Sheeba
'47': Helicobacter hepaticus ATCC 51449
'48': Helicobacter pylori 26695 ASM852v1
'49': Hydrogenobacter thermophilus TK-6 ASM1078v1
'50': Idiomarina loihiensis L2TR
'51': Kocuria rhizophila DC2201
'52': Lactobacillus fermentum IFO 3956
'53': Lactobacillus salivarius UCC118
'54': Lactococcus lactis subsp. lactis Il1403 IL1403
'55': Macrococcus caseolyticus JCSC5402
'56': Magnetospirillum magneticum AMB-1
'57': Mannheimia succiniciproducens MBEL55E
'58': Methanocella paludicola SANAE
'59': Methanococcus voltae A3
'60': Methanopyrus kandleri AV19
'61': Methanosarcina acetivorans C2A
'62': Methanothermobacter thermautotrophicus str. Delta H
'63': Methylococcus capsulatus str. Bath
'64': Microcystis aeruginosa NIES-843
'65': Mycobacterium avium subsp. paratuberculosis K-10
'66': Neisseria gonorrhoeae FA 1090
'67': Neisseria meningitidis MC58
'68': Nitratiruptor sp. SB155-2 ASM1032v1
'69': Nitrosomonas europaea ATCC 19718
'70': Nostoc sp. PCC 7120 ASM970v1
'71': Onion yellows phytoplasma OY-M onion yellows
'72': Orientia tsutsugamushi str. Ikeda
'73': Pelotomaculum thermopropionicum SI
'74': Picrophilus torridus DSM 9790
'75': Porphyromonas gingivalis ATCC 33277
'76': Prochlorococcus marinus subsp. marinus str. CCMP1375
'77': Propionibacterium acnes KPA171202
'78': Pseudomonas putida KT2440
'79': Pyrobaculum aerophilum str. IM2
'80': Pyrococcus furiosus DSM 3638
'81': Ralstonia solanacearum GMI1000
'82': Rickettsia conorii str. Malish 7
'83': Rickettsia typhi str. Wilmington
'84': Rothia mucilaginosa DY-18
'85': Shigella flexneri 2a str. 301
'86': Sinorhizobium meliloti 1021
'87': Sodalis glossinidius str. 'morsitans' morsitans
'88': Staphylococcus epidermidis ATCC 12228 ASM764v1
'89': Staphylococcus haemolyticus JCSC1435
'90': >-
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
ASM1012v1
'91': Streptococcus agalactiae 2603V/R
'92': Streptococcus mutans UA159
'93': Streptococcus pyogenes M1 GAS SF370
'94': Streptococcus uberis 0140J
'95': Streptomyces avermitilis MA-4680 = NBRC 14893 MA-4680 ASM976v2
'96': Streptomyces griseus subsp. griseus NBRC 13350
'97': Sulfolobus solfataricus P2
'98': Sulfurovum sp. NBC37-1 ASM1034v1
'99': Symbiobacterium thermophilum IAM 14863 IAM14863
'100': Synechococcus elongatus PCC 6301
'101': Synechocystis sp. PCC 6803 ASM972v1
'102': Thermococcus kodakarensis KOD1
'103': Thermotoga maritima MSB8 ASM854v1
'104': Treponema denticola ATCC 35405
'105': Treponema pallidum subsp. pallidum str. Nichols ASM860v1
'106': Tropheryma whipplei str. Twist
'107': Vibrio cholerae O1 biovar El Tor str. N16961
'108': Vibrio vulnificus YJ016
'109': Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis
'110': Wolbachia endosymbiont of Drosophila melanogaster wMel
'111': Wolbachia endosymbiont strain TRS of Brugia malayi
'112': Xanthomonas campestris pv. campestris str. ATCC 33913
'113': Xanthomonas oryzae pv. oryzae KACC 10331
'114': Xylella fastidiosa 9a5c
'115': Yersinia enterocolitica subsp. enterocolitica 8081
'116': Yersinia pestis CO92 ASM906v1
'117': Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 ZM4
'118': '[Bacillus thuringiensis] serovar konkukian str. 97-27'
'119': '[Pseudomonas syringae] pv. tomato str. DC3000'
'120': homo sapiens
splits:
- name: train
num_bytes: 683959051
num_examples: 1000000
- name: validation
num_bytes: 68390921
num_examples: 100000
download_size: 158127793
dataset_size: 752349972
configs:
- config_name: default
data_files:
- split: train
path: data/train-*
- split: validation
path: data/validation-*