primate-proteins / README.md
monsoon-nlp's picture
Update README.md
cbb40e3 verified
metadata
license: cc
tags:
  - biology
  - protein
  - primate

All primate proteins in UniProtKB (knowledge base) which have been reviewed (Swiss-Prot), including but not limited to humans.

Each row contains a gene name, species or subspecies, an amino acid sequence, and comments / annotations available in UniProt. A gene name may match multiple entries / IDs on UniProt from different accessions.

Annotations may be empty, or may include information such as:

  • likely function, written in English
  • location inside of cell (e.g. "Subcellular locations: Cytoplasm, Melanosome")
  • locations in the body (e.g. "Isoform 1 is only expressed in skeletal muscle.")

Removed PubMed reference numbers to avoid training models to hallucinate PubMed references.

XML source from https://www.uniprot.org/help/downloads

CoLab notebook: https://colab.research.google.com/drive/1M6sO0Ws6i5z9VUXIXopiOqo1OkQ7K-1g?usp=sharing