Lots of changes...

-Surpressed error warnings.  This happened later or it wouldn't have mattered so much.  Added code to the form_handler so errors weren't thrown when trying to check variables that were not there.
-Corrected paths that were going to old directories so that includes now work.  Still not working exactly like I want but I don't have the time right now to get it working so...this will do.
-removed empty php directory
-Plenty of other things that I can't remember but I'm sure are important.