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#!/bin/sh
NPROCS=$1
MIRRORDIR=pdb # your top level rsync directory
RSYNC=rsync # location of local rsync
SERVER=rsync.wwpdb.org::ftp # RCSB PDB server name
PORT=33444 # port RCSB PDB server is using
# get file list, remove first and last 3 lines from output (double-check that these lines are not needed)
${RSYNC} -lpt -v -z --delete --port=$PORT --no-h --list-only ${SERVER}/data/structures/divided/pdb/ | cut -c 44- | head -n -3 | tail -n +3 > dirlist.txt
cat dirlist.txt | xargs -n1 -P${NPROCS} -I% rsync -rlpt -v -z --port=$PORT -P ${SERVER}/data/structures/divided/pdb/% $MIRRORDIR
rm dirlist.txt
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