Datasets:
Tasks:
Text Classification
Formats:
parquet
Sub-tasks:
semantic-similarity-classification
Languages:
code
Size:
1M - 10M
License:
id
int32 0
901k
| id1
int32 74
23.7M
| id2
int32 74
23.7M
| func1
stringlengths 234
68.5k
| func2
stringlengths 234
68.5k
| label
bool 2
classes |
|---|---|---|---|---|---|
0 | 13,988,825 | 8,660,836 | private void setNodekeyInJsonResponse(String service) throws Exception {
String filename = this.baseDirectory + service + ".json";
Scanner s = new Scanner(new File(filename));
PrintWriter fw = new PrintWriter(new File(filename + ".new"));
while (s.hasNextLine()) {
fw.println(s.nextLine().replaceAll("NODEKEY", this.key));
}
s.close();
fw.close();
(new File(filename + ".new")).renameTo(new File(filename));
}
| public void transform(String style, String spec, OutputStream out) throws IOException {
URL url = new URL(rootURL, spec);
InputStream in = new PatchXMLSymbolsStream(new StripDoctypeStream(url.openStream()));
transform(style, in, out);
in.close();
}
| false |
1 | 80,378 | 18,548,122 | public static void test(String args[]) {
int trace;
int bytes_read = 0;
int last_contentLenght = 0;
try {
BufferedReader reader;
URL url;
url = new URL(args[0]);
URLConnection istream = url.openConnection();
last_contentLenght = istream.getContentLength();
reader = new BufferedReader(new InputStreamReader(istream.getInputStream()));
System.out.println(url.toString());
String line;
trace = t2pNewTrace();
while ((line = reader.readLine()) != null) {
bytes_read = bytes_read + line.length() + 1;
t2pProcessLine(trace, line);
}
t2pHandleEventPairs(trace);
t2pSort(trace, 0);
t2pExportTrace(trace, new String("pngtest2.png"), 1000, 700, (float) 0, (float) 33);
t2pExportTrace(trace, new String("pngtest3.png"), 1000, 700, (float) 2.3, (float) 2.44);
System.out.println("Press any key to contiune read from stream !!!");
System.out.println(t2pGetProcessName(trace, 0));
System.in.read();
istream = url.openConnection();
if (last_contentLenght != istream.getContentLength()) {
istream = url.openConnection();
istream.setRequestProperty("Range", "bytes=" + Integer.toString(bytes_read) + "-");
System.out.println(Integer.toString(istream.getContentLength()));
reader = new BufferedReader(new InputStreamReader(istream.getInputStream()));
while ((line = reader.readLine()) != null) {
System.out.println(line);
t2pProcessLine(trace, line);
}
} else System.out.println("File not changed !");
t2pDeleteTrace(trace);
} catch (MalformedURLException e) {
System.out.println("MalformedURLException !!!");
} catch (IOException e) {
System.out.println("File not found " + args[0]);
}
;
}
| private static String loadUrlToString(String a_url) throws IOException {
URL l_url1 = new URL(a_url);
BufferedReader br = new BufferedReader(new InputStreamReader(l_url1.openStream()));
String l_content = "";
String l_ligne = null;
l_content = br.readLine();
while ((l_ligne = br.readLine()) != null) {
l_content += AA.SL + l_ligne;
}
return l_content;
}
| true |
2 | 21,354,223 | 7,421,563 | public String kodetu(String testusoila) {
MessageDigest md = null;
try {
md = MessageDigest.getInstance("SHA");
md.update(testusoila.getBytes("UTF-8"));
} catch (NoSuchAlgorithmException e) {
new MezuLeiho("Ez da zifraketa algoritmoa aurkitu", "Ados", "Zifraketa Arazoa", JOptionPane.ERROR_MESSAGE);
e.printStackTrace();
} catch (UnsupportedEncodingException e) {
new MezuLeiho("Errorea kodetzerakoan", "Ados", "Kodeketa Errorea", JOptionPane.ERROR_MESSAGE);
e.printStackTrace();
}
byte raw[] = md.digest();
String hash = (new BASE64Encoder()).encode(raw);
return hash;
}
| private StringBuffer encoder(String arg) {
if (arg == null) {
arg = "";
}
MessageDigest md5 = null;
try {
md5 = MessageDigest.getInstance("MD5");
md5.update(arg.getBytes(SysConstant.charset));
} catch (Exception e) {
e.printStackTrace();
}
return toHex(md5.digest());
}
| true |
3 | 15,826,299 | 19,728,871 | public static void printResponseHeaders(String address) {
logger.info("Address: " + address);
try {
URL url = new URL(address);
URLConnection conn = url.openConnection();
for (int i = 0; ; i++) {
String headerName = conn.getHeaderFieldKey(i);
String headerValue = conn.getHeaderField(i);
if (headerName == null && headerValue == null) {
break;
}
if (headerName == null) {
logger.info(headerValue);
continue;
}
logger.info(headerName + " " + headerValue);
}
} catch (Exception e) {
logger.error("Exception Message: " + e.getMessage());
}
}
| public static String getEncodedPassword(String buff) {
if (buff == null) return null;
String t = new String();
try {
MessageDigest md = MessageDigest.getInstance("MD5");
md.update(buff.getBytes());
byte[] r = md.digest();
for (int i = 0; i < r.length; i++) {
t += toHexString(r[i]);
}
} catch (Exception e) {
e.printStackTrace();
}
return t;
}
| false |
4 | 9,938,081 | 11,517,213 | public void load(String fileName) {
BufferedReader bufReader;
loaded = false;
vector.removeAllElements();
try {
if (fileName.startsWith("http:")) {
URL url = new URL(fileName);
bufReader = new BufferedReader(new InputStreamReader(url.openStream()));
} else bufReader = new BufferedReader(new FileReader(fileName));
String inputLine;
while ((inputLine = bufReader.readLine()) != null) {
if (listener != null) listener.handleLine(inputLine); else vector.add(inputLine);
}
bufReader.close();
loaded = true;
} catch (IOException e) {
errorMsg = e.getMessage();
}
}
| private static void copyFile(File sourceFile, File destFile) {
try {
if (!destFile.exists()) {
destFile.createNewFile();
}
FileChannel source = null;
FileChannel destination = null;
try {
source = new FileInputStream(sourceFile).getChannel();
destination = new FileOutputStream(destFile).getChannel();
destination.transferFrom(source, 0, source.size());
} finally {
if (source != null) {
source.close();
}
if (destination != null) {
destination.close();
}
}
} catch (Exception e) {
throw new RuntimeException(e);
}
}
| false |
5 | 18,220,543 | 17,366,812 | private MapProperties readProperties(URL url) {
@SuppressWarnings("unchecked") MapProperties properties = new MapProperties(new LinkedHashMap());
InputStream is = null;
try {
is = url.openStream();
properties.load(is);
} catch (IOException ex) {
throw new RuntimeException(ex);
} finally {
StreamUtils.close(is);
}
return properties;
}
| public String tranportRemoteUnitToLocalTempFile(String urlStr) throws UnitTransportException {
InputStream input = null;
BufferedOutputStream bos = null;
File tempUnit = null;
try {
URL url = null;
int total = 0;
try {
url = new URL(urlStr);
input = url.openStream();
URLConnection urlConnection;
urlConnection = url.openConnection();
total = urlConnection.getContentLength();
} catch (IOException e) {
throw new UnitTransportException(String.format("Can't get remote file [%s].", urlStr), e);
}
String unitName = urlStr.substring(urlStr.lastIndexOf('/') + 1);
tempUnit = null;
try {
if (StringUtils.isNotEmpty(unitName)) tempUnit = new File(CommonUtil.getTempDir(), unitName); else tempUnit = File.createTempFile(CommonUtil.getTempDir(), "tempUnit");
File parent = tempUnit.getParentFile();
FileUtils.forceMkdir(parent);
if (!tempUnit.exists()) FileUtils.touch(tempUnit);
bos = new BufferedOutputStream(new FileOutputStream(tempUnit));
} catch (FileNotFoundException e) {
throw new UnitTransportException(String.format("Can't find temp file [%s].", tempUnit.getAbsolutePath()), e);
} catch (IOException e) {
throw new UnitTransportException(String.format("Can't create temp file [%s].", tempUnit.getAbsolutePath()), e);
} catch (DeployToolException e) {
throw new UnitTransportException(String.format("Error when create temp file [%s].", tempUnit), e);
}
logger.info(String.format("Use [%s] for http unit [%s].", tempUnit.getAbsoluteFile(), urlStr));
int size = -1;
try {
size = IOUtils.copy(input, bos);
bos.flush();
} catch (IOException e) {
logger.info(String.format("Error when download [%s] to [%s].", urlStr, tempUnit));
}
if (size != total) throw new UnitTransportException(String.format("The file size is not right when download http unit [%s]", urlStr));
} finally {
if (input != null) IOUtils.closeQuietly(input);
if (bos != null) IOUtils.closeQuietly(bos);
}
logger.info(String.format("Download unit to [%s].", tempUnit.getAbsolutePath()));
return tempUnit.getAbsolutePath();
}
| false |
6 | 22,328,849 | 17,334,846 | protected void doRestoreOrganize() throws Exception {
Connection con = null;
PreparedStatement ps = null;
ResultSet result = null;
String strDelQuery = "DELETE FROM " + Common.ORGANIZE_TABLE;
String strSelQuery = "SELECT organize_id,organize_type_id,organize_name,organize_manager," + "organize_describe,work_type,show_order,position_x,position_y " + "FROM " + Common.ORGANIZE_B_TABLE + " " + "WHERE version_no = ?";
String strInsQuery = "INSERT INTO " + Common.ORGANIZE_TABLE + " " + "(organize_id,organize_type_id,organize_name,organize_manager," + "organize_describe,work_type,show_order,position_x,position_y) " + "VALUES (?,?,?,?,?,?,?,?,?)";
DBOperation dbo = factory.createDBOperation(POOL_NAME);
try {
try {
con = dbo.getConnection();
con.setAutoCommit(false);
ps = con.prepareStatement(strDelQuery);
ps.executeUpdate();
ps = con.prepareStatement(strSelQuery);
ps.setInt(1, this.versionNO);
result = ps.executeQuery();
ps = con.prepareStatement(strInsQuery);
while (result.next()) {
ps.setString(1, result.getString("organize_id"));
ps.setString(2, result.getString("organize_type_id"));
ps.setString(3, result.getString("organize_name"));
ps.setString(4, result.getString("organize_manager"));
ps.setString(5, result.getString("organize_describe"));
ps.setString(6, result.getString("work_type"));
ps.setInt(7, result.getInt("show_order"));
ps.setInt(8, result.getInt("position_x"));
ps.setInt(9, result.getInt("position_y"));
int resultCount = ps.executeUpdate();
if (resultCount != 1) {
con.rollback();
throw new CesSystemException("Organize_backup.doRestoreOrganize(): ERROR Inserting data " + "in T_SYS_ORGANIZE INSERT !! resultCount = " + resultCount);
}
}
con.commit();
} catch (SQLException se) {
con.rollback();
throw new CesSystemException("Organize_backup.doRestoreOrganize(): SQLException: " + se);
} finally {
con.setAutoCommit(true);
close(dbo, ps, result);
}
} catch (SQLException se) {
throw new CesSystemException("Organize_backup.doRestoreOrganize(): SQLException while committing or rollback");
}
}
| static String encodeEmailAsUserId(String email) {
try {
MessageDigest md5 = MessageDigest.getInstance("MD5");
md5.update(email.toLowerCase().getBytes());
StringBuilder builder = new StringBuilder();
builder.append("1");
for (byte b : md5.digest()) {
builder.append(String.format("%02d", new Object[] { Integer.valueOf(b & 0xFF) }));
}
return builder.toString().substring(0, 20);
} catch (NoSuchAlgorithmException ex) {
}
return "";
}
| false |
7 | 19,130,322 | 15,710,690 | private String sha1(String s) {
String encrypt = s;
try {
MessageDigest sha = MessageDigest.getInstance("SHA-1");
sha.update(s.getBytes());
byte[] digest = sha.digest();
final StringBuffer buffer = new StringBuffer();
for (int i = 0; i < digest.length; ++i) {
final byte b = digest[i];
final int value = (b & 0x7F) + (b < 0 ? 128 : 0);
buffer.append(value < 16 ? "0" : "");
buffer.append(Integer.toHexString(value));
}
encrypt = buffer.toString();
} catch (NoSuchAlgorithmException e) {
e.printStackTrace();
}
return encrypt;
}
| @SuppressWarnings("unused")
private String getMD5(String value) {
MessageDigest md5;
try {
md5 = MessageDigest.getInstance("MD5");
} catch (NoSuchAlgorithmException e) {
return "";
}
md5.reset();
md5.update(value.getBytes());
byte[] messageDigest = md5.digest();
StringBuffer hexString = new StringBuffer();
for (int i = 0; i < messageDigest.length; i++) {
hexString.append(Integer.toHexString(0xFF & messageDigest[i]));
}
String hashedPassword = hexString.toString();
return hashedPassword;
}
| true |
8 | 1,111,832 | 789,472 | private void storeFieldMap(WorkingContent c, Connection conn) throws SQLException {
SQLDialect dialect = getDatabase().getSQLDialect();
if (TRANSACTIONS_ENABLED) {
conn.setAutoCommit(false);
}
try {
Object thisKey = c.getPrimaryKey();
deleteFieldContent(thisKey, conn);
PreparedStatement ps = null;
StructureItem nextItem;
Map fieldMap = c.getFieldMap();
String type;
Object value, siKey;
for (Iterator i = c.getStructure().getStructureItems().iterator(); i.hasNext(); ) {
nextItem = (StructureItem) i.next();
type = nextItem.getDataType().toUpperCase();
siKey = nextItem.getPrimaryKey();
value = fieldMap.get(nextItem.getName());
try {
if (type.equals(StructureItem.DATE)) {
ps = conn.prepareStatement(sqlConstants.get("INSERT_DATE_FIELD"));
ps.setObject(1, thisKey);
ps.setObject(2, siKey);
dialect.setDate(ps, 3, (Date) value);
ps.executeUpdate();
} else if (type.equals(StructureItem.INT) || type.equals(StructureItem.FLOAT) || type.equals(StructureItem.VARCHAR)) {
ps = conn.prepareStatement(sqlConstants.get("INSERT_" + type + "_FIELD"));
ps.setObject(1, thisKey);
ps.setObject(2, siKey);
if (value != null) {
ps.setObject(3, value);
} else {
int sqlType = Types.INTEGER;
if (type.equals(StructureItem.FLOAT)) {
sqlType = Types.FLOAT;
} else if (type.equals(StructureItem.VARCHAR)) {
sqlType = Types.VARCHAR;
}
ps.setNull(3, sqlType);
}
ps.executeUpdate();
} else if (type.equals(StructureItem.TEXT)) {
setTextField(c, siKey, (String) value, conn);
}
if (ps != null) {
ps.close();
ps = null;
}
} finally {
if (ps != null) ps.close();
}
}
if (TRANSACTIONS_ENABLED) {
conn.commit();
}
} catch (SQLException e) {
if (TRANSACTIONS_ENABLED) {
conn.rollback();
}
throw e;
} finally {
if (TRANSACTIONS_ENABLED) {
conn.setAutoCommit(true);
}
}
}
| public void elimina(Pedido pe) throws errorSQL, errorConexionBD {
System.out.println("GestorPedido.elimina()");
int id = pe.getId();
String sql;
Statement stmt = null;
try {
gd.begin();
sql = "DELETE FROM pedido WHERE id=" + id;
System.out.println("Ejecutando: " + sql);
stmt = gd.getConexion().createStatement();
stmt.executeUpdate(sql);
System.out.println("executeUpdate");
gd.commit();
System.out.println("commit");
stmt.close();
} catch (SQLException e) {
gd.rollback();
throw new errorSQL(e.toString());
} catch (errorConexionBD e) {
System.err.println("Error en GestorPedido.elimina(): " + e);
} catch (errorSQL e) {
System.err.println("Error en GestorPedido.elimina(): " + e);
}
}
| true |
9 | 7,046,481 | 18,317,332 | public InlineImageChunk(URL url) {
super();
this.url = url;
try {
URLConnection urlConn = url.openConnection();
urlConn.setReadTimeout(15000);
ImageInputStream iis = ImageIO.createImageInputStream(urlConn.getInputStream());
Iterator<ImageReader> readers = ImageIO.getImageReaders(iis);
if (readers.hasNext()) {
ImageReader reader = readers.next();
reader.setInput(iis, true);
this.width = reader.getWidth(0);
this.ascent = reader.getHeight(0);
this.descent = 0;
reader.dispose();
} else System.err.println("cannot read width and height of image " + url + " - no suitable reader!");
} catch (Exception exc) {
System.err.println("cannot read width and height of image " + url + " due to exception:");
System.err.println(exc);
exc.printStackTrace(System.err);
}
}
| void execute(Connection conn, Component parent, String context, final ProgressMonitor progressMonitor, ProgressWrapper progressWrapper) throws Exception {
int noOfComponents = m_components.length;
Statement statement = null;
StringBuffer pmNoteBuf = new StringBuffer(m_update ? "Updating " : "Creating ");
pmNoteBuf.append(m_itemNameAbbrev);
pmNoteBuf.append(" ");
pmNoteBuf.append(m_itemNameValue);
final String pmNote = pmNoteBuf.toString();
progressMonitor.setNote(pmNote);
try {
conn.setAutoCommit(false);
int id = -1;
if (m_update) {
statement = conn.createStatement();
String sql = getUpdateSql(noOfComponents, m_id);
statement.executeUpdate(sql);
id = m_id;
if (m_indexesChanged) deleteComponents(conn, id);
} else {
PreparedStatement pStmt = getInsertPrepStmt(conn, noOfComponents);
pStmt.executeUpdate();
Integer res = DbCommon.getAutoGenId(parent, context, pStmt);
if (res == null) return;
id = res.intValue();
}
if (!m_update || m_indexesChanged) {
PreparedStatement insertCompPrepStmt = conn.prepareStatement(getInsertComponentPrepStmtSql());
for (int i = 0; i < noOfComponents; i++) {
createComponent(progressMonitor, m_components, pmNote, id, i, insertCompPrepStmt);
}
}
conn.commit();
m_itemTable.getPrimaryId().setVal(m_item, id);
m_itemCache.updateCache(m_item, id);
} catch (SQLException ex) {
try {
conn.rollback();
} catch (SQLException e) {
e.printStackTrace();
}
throw ex;
} finally {
if (statement != null) {
statement.close();
}
}
}
| false |
10 | 190,292 | 978,946 | private static void main(String[] args) {
try {
File f = new File("test.txt");
if (f.exists()) {
throw new IOException(f + " already exists. I don't want to overwrite it.");
}
StraightStreamReader in;
char[] cbuf = new char[0x1000];
int read;
int totRead;
FileOutputStream out = new FileOutputStream(f);
for (int i = 0x00; i < 0x100; i++) {
out.write(i);
}
out.close();
in = new StraightStreamReader(new FileInputStream(f));
for (int i = 0x00; i < 0x100; i++) {
read = in.read();
if (read != i) {
System.err.println("Error: " + i + " read as " + read);
}
}
in.close();
in = new StraightStreamReader(new FileInputStream(f));
totRead = in.read(cbuf);
if (totRead != 0x100) {
System.err.println("Simple buffered read did not read the full amount: 0x" + Integer.toHexString(totRead));
}
for (int i = 0x00; i < totRead; i++) {
if (cbuf[i] != i) {
System.err.println("Error: 0x" + i + " read as 0x" + cbuf[i]);
}
}
in.close();
in = new StraightStreamReader(new FileInputStream(f));
totRead = 0;
while (totRead <= 0x100 && (read = in.read(cbuf, totRead, 0x100 - totRead)) > 0) {
totRead += read;
}
if (totRead != 0x100) {
System.err.println("Not enough read. Bytes read: " + Integer.toHexString(totRead));
}
for (int i = 0x00; i < totRead; i++) {
if (cbuf[i] != i) {
System.err.println("Error: 0x" + i + " read as 0x" + cbuf[i]);
}
}
in.close();
in = new StraightStreamReader(new FileInputStream(f));
totRead = 0;
while (totRead <= 0x100 && (read = in.read(cbuf, totRead + 0x123, 0x100 - totRead)) > 0) {
totRead += read;
}
if (totRead != 0x100) {
System.err.println("Not enough read. Bytes read: " + Integer.toHexString(totRead));
}
for (int i = 0x00; i < totRead; i++) {
if (cbuf[i + 0x123] != i) {
System.err.println("Error: 0x" + i + " read as 0x" + cbuf[i + 0x123]);
}
}
in.close();
in = new StraightStreamReader(new FileInputStream(f));
totRead = 0;
while (totRead <= 0x100 && (read = in.read(cbuf, totRead + 0x123, 7)) > 0) {
totRead += read;
}
if (totRead != 0x100) {
System.err.println("Not enough read. Bytes read: " + Integer.toHexString(totRead));
}
for (int i = 0x00; i < totRead; i++) {
if (cbuf[i + 0x123] != i) {
System.err.println("Error: 0x" + i + " read as 0x" + cbuf[i + 0x123]);
}
}
in.close();
f.delete();
} catch (IOException x) {
System.err.println(x.getMessage());
}
}
| public static void copyFile(File in, File out) throws IOException {
FileChannel inChannel = new FileInputStream(in).getChannel();
FileChannel outChannel = new FileOutputStream(out).getChannel();
try {
inChannel.transferTo(0, inChannel.size(), outChannel);
} catch (IOException e) {
throw e;
} finally {
if (inChannel != null) inChannel.close();
if (outChannel != null) outChannel.close();
}
}
| true |
11 | 19,653,581 | 9,312,243 | public List<SuspectFileProcessingStatus> retrieve() throws Exception {
BufferedOutputStream bos = null;
try {
String listFilePath = GeneralUtils.generateAbsolutePath(getDownloadDirectoryPath(), getListName(), "/");
listFilePath = listFilePath.concat(".xml");
if (!new File(getDownloadDirectoryPath()).exists()) {
FileUtils.forceMkdir(new File(getDownloadDirectoryPath()));
}
FileOutputStream listFileOutputStream = new FileOutputStream(listFilePath);
bos = new BufferedOutputStream(listFileOutputStream);
InputStream is = null;
if (getUseProxy()) {
is = URLUtils.getResponse(getUrl(), getUserName(), getPassword(), URLUtils.HTTP_GET_METHOD, getProxyHost(), getProxyPort());
IOUtils.copyLarge(is, bos);
} else {
URLUtils.getResponse(getUrl(), getUserName(), getPassword(), bos, null);
}
bos.flush();
bos.close();
File listFile = new File(listFilePath);
if (!listFile.exists()) {
throw new IllegalStateException("The list file did not get created");
}
if (isLoggingInfo()) {
logInfo("Downloaded list file : " + listFile);
}
List<SuspectFileProcessingStatus> sfpsList = new ArrayList<SuspectFileProcessingStatus>();
String loadType = GeneralConstants.LOAD_TYPE_FULL;
String feedType = GeneralConstants.EMPTY_TOKEN;
String listName = getListName();
String errorCode = "";
String description = "";
SuspectFileProcessingStatus sfps = getSuspectsLoaderService().storeFileIntoListIncomingDir(listFile, loadType, feedType, listName, errorCode, description);
sfpsList.add(sfps);
if (isLoggingInfo()) {
logInfo("Retrieved list file with SuspectFileProcessingStatus: " + sfps);
}
return sfpsList;
} finally {
if (null != bos) {
bos.close();
}
}
}
| void shutdown(final boolean unexpected) {
if (unexpected) {
log.warn("S H U T D O W N --- received unexpected shutdown request.");
} else {
log.info("S H U T D O W N --- start regular shutdown.");
}
if (this.uncaughtException != null) {
log.warn("Shutdown probably caused by the following Exception.", this.uncaughtException);
}
log.error("check if we need the controler listener infrastructure");
if (this.dumpDataAtEnd) {
new PopulationWriter(this.population, this.network).write(this.controlerIO.getOutputFilename(FILENAME_POPULATION));
new NetworkWriter(this.network).write(this.controlerIO.getOutputFilename(FILENAME_NETWORK));
new ConfigWriter(this.config).write(this.controlerIO.getOutputFilename(FILENAME_CONFIG));
if (!unexpected && this.getConfig().vspExperimental().isWritingOutputEvents()) {
File toFile = new File(this.controlerIO.getOutputFilename("output_events.xml.gz"));
File fromFile = new File(this.controlerIO.getIterationFilename(this.getLastIteration(), "events.xml.gz"));
IOUtils.copyFile(fromFile, toFile);
}
}
if (unexpected) {
log.info("S H U T D O W N --- unexpected shutdown request completed.");
} else {
log.info("S H U T D O W N --- regular shutdown completed.");
}
try {
Runtime.getRuntime().removeShutdownHook(this.shutdownHook);
} catch (IllegalStateException e) {
log.info("Cannot remove shutdown hook. " + e.getMessage());
}
this.shutdownHook = null;
this.collectLogMessagesAppender = null;
IOUtils.closeOutputDirLogging();
}
| true |
12 | 369,572 | 4,761,833 | private void displayDiffResults() throws IOException {
File outFile = File.createTempFile("diff", ".htm");
outFile.deleteOnExit();
FileOutputStream outStream = new FileOutputStream(outFile);
BufferedWriter out = new BufferedWriter(new OutputStreamWriter(outStream));
out.write("<html><head><title>LOC Differences</title>\n" + SCRIPT + "</head>\n" + "<body bgcolor='#ffffff'>\n" + "<div onMouseOver=\"window.defaultStatus='Metrics'\">\n");
if (addedTable.length() > 0) {
out.write("<table border><tr><th>Files Added:</th>" + "<th>Add</th><th>Type</th></tr>");
out.write(addedTable.toString());
out.write("</table><br><br>");
}
if (modifiedTable.length() > 0) {
out.write("<table border><tr><th>Files Modified:</th>" + "<th>Base</th><th>Del</th><th>Mod</th><th>Add</th>" + "<th>Total</th><th>Type</th></tr>");
out.write(modifiedTable.toString());
out.write("</table><br><br>");
}
if (deletedTable.length() > 0) {
out.write("<table border><tr><th>Files Deleted:</th>" + "<th>Del</th><th>Type</th></tr>");
out.write(deletedTable.toString());
out.write("</table><br><br>");
}
out.write("<table name=METRICS BORDER>\n");
if (modifiedTable.length() > 0 || deletedTable.length() > 0) {
out.write("<tr><td>Base: </td><td>");
out.write(Long.toString(base));
out.write("</td></tr>\n<tr><td>Deleted: </td><td>");
out.write(Long.toString(deleted));
out.write("</td></tr>\n<tr><td>Modified: </td><td>");
out.write(Long.toString(modified));
out.write("</td></tr>\n<tr><td>Added: </td><td>");
out.write(Long.toString(added));
out.write("</td></tr>\n<tr><td>New & Changed: </td><td>");
out.write(Long.toString(added + modified));
out.write("</td></tr>\n");
}
out.write("<tr><td>Total: </td><td>");
out.write(Long.toString(total));
out.write("</td></tr>\n</table></div>");
redlinesOut.close();
out.flush();
InputStream redlines = new FileInputStream(redlinesTempFile);
byte[] buffer = new byte[4096];
int bytesRead;
while ((bytesRead = redlines.read(buffer)) != -1) outStream.write(buffer, 0, bytesRead);
outStream.write("</BODY></HTML>".getBytes());
outStream.close();
Browser.launch(outFile.toURL().toString());
}
| private void copyFileToDir(MyFile file, MyFile to, wlPanel panel) throws IOException {
Utilities.print("started copying " + file.getAbsolutePath() + "\n");
FileOutputStream fos = new FileOutputStream(new File(to.getAbsolutePath()));
FileChannel foc = fos.getChannel();
FileInputStream fis = new FileInputStream(new File(file.getAbsolutePath()));
FileChannel fic = fis.getChannel();
Date d1 = new Date();
long amount = foc.transferFrom(fic, rest, fic.size() - rest);
fic.close();
foc.force(false);
foc.close();
Date d2 = new Date();
long time = d2.getTime() - d1.getTime();
double secs = time / 1000.0;
double rate = amount / secs;
frame.getStatusArea().append(secs + "s " + "amount: " + Utilities.humanReadable(amount) + " rate: " + Utilities.humanReadable(rate) + "/s\n", "black");
panel.updateView();
}
| true |
13 | 2,285,441 | 16,987,999 | static synchronized Person lookup(PhoneNumber number, String siteName) {
Vector<Person> foundPersons = new Vector<Person>(5);
if (number.isFreeCall()) {
Person p = new Person("", "FreeCall");
p.addNumber(number);
foundPersons.add(p);
} else if (number.isSIPNumber() || number.isQuickDial()) {
Person p = new Person();
p.addNumber(number);
foundPersons.add(p);
} else if (ReverseLookup.rlsMap.containsKey(number.getCountryCode())) {
nummer = number.getAreaNumber();
rls_list = ReverseLookup.rlsMap.get(number.getCountryCode());
Debug.info("Begin reverselookup for: " + nummer);
if (nummer.startsWith(number.getCountryCode())) nummer = nummer.substring(number.getCountryCode().length());
city = "";
for (int i = 0; i < rls_list.size(); i++) {
yield();
rls = rls_list.get(i);
if (!siteName.equals("") && !siteName.equals(rls.getName())) {
Debug.warning("This lookup should be done using a specific site, skipping");
continue;
}
prefix = rls.getPrefix();
ac_length = rls.getAreaCodeLength();
if (!nummer.startsWith(prefix)) nummer = prefix + nummer;
urlstr = rls.getURL();
if (urlstr.contains("$AREACODE")) {
urlstr = urlstr.replaceAll("\\$AREACODE", nummer.substring(prefix.length(), ac_length + prefix.length()));
urlstr = urlstr.replaceAll("\\$NUMBER", nummer.substring(prefix.length() + ac_length));
} else if (urlstr.contains("$PFXAREACODE")) {
urlstr = urlstr.replaceAll("\\$PFXAREACODE", nummer.substring(0, prefix.length() + ac_length));
urlstr = urlstr.replaceAll("\\$NUMBER", nummer.substring(prefix.length() + ac_length));
} else urlstr = urlstr.replaceAll("\\$NUMBER", nummer);
Debug.info("Reverse lookup using: " + urlstr);
url = null;
data = new String[dataLength];
try {
url = new URL(urlstr);
if (url != null) {
try {
con = url.openConnection();
con.setConnectTimeout(5000);
con.setReadTimeout(15000);
con.addRequestProperty("User-Agent", userAgent);
con.connect();
header = "";
charSet = "";
for (int j = 0; ; j++) {
String headerName = con.getHeaderFieldKey(j);
String headerValue = con.getHeaderField(j);
if (headerName == null && headerValue == null) {
break;
}
if ("content-type".equalsIgnoreCase(headerName)) {
String[] split = headerValue.split(";", 2);
for (int k = 0; k < split.length; k++) {
if (split[k].trim().toLowerCase().startsWith("charset=")) {
String[] charsetSplit = split[k].split("=");
charSet = charsetSplit[1].trim();
}
}
}
header += headerName + ": " + headerValue + " | ";
}
Debug.debug("Header of " + rls.getName() + ":" + header);
Debug.debug("CHARSET : " + charSet);
BufferedReader d;
if (charSet.equals("")) {
d = new BufferedReader(new InputStreamReader(con.getInputStream(), "ISO-8859-1"));
} else {
d = new BufferedReader(new InputStreamReader(con.getInputStream(), charSet));
}
int lines = 0;
while (null != ((str = d.readLine()))) {
data[lines] = str;
yield();
if (lines >= dataLength) {
System.err.println("Result > " + dataLength + " Lines");
break;
}
lines++;
}
d.close();
Debug.info("Begin processing response from " + rls.getName());
for (int j = 0; j < rls.size(); j++) {
yield();
firstname = "";
lastname = "";
company = "";
street = "";
zipcode = "";
city = "";
Person p = null;
patterns = rls.getEntry(j);
Pattern namePattern = null;
Pattern streetPattern = null;
Pattern cityPattern = null;
Pattern zipcodePattern = null;
Pattern firstnamePattern = null;
Pattern lastnamePattern = null;
Matcher nameMatcher = null;
Matcher streetMatcher = null;
Matcher cityMatcher = null;
Matcher zipcodeMatcher = null;
Matcher firstnameMatcher = null;
Matcher lastnameMatcher = null;
if (!patterns[ReverseLookupSite.NAME].equals("") && (patterns[ReverseLookupSite.FIRSTNAME].equals("") && patterns[ReverseLookupSite.LASTNAME].equals(""))) {
namePattern = Pattern.compile(patterns[ReverseLookupSite.NAME]);
}
if (!patterns[ReverseLookupSite.STREET].equals("")) {
streetPattern = Pattern.compile(patterns[ReverseLookupSite.STREET]);
}
if (!patterns[ReverseLookupSite.CITY].equals("")) {
cityPattern = Pattern.compile(patterns[ReverseLookupSite.CITY]);
}
if (!patterns[ReverseLookupSite.ZIPCODE].equals("")) {
zipcodePattern = Pattern.compile(patterns[ReverseLookupSite.ZIPCODE]);
}
if (!patterns[ReverseLookupSite.FIRSTNAME].equals("")) {
firstnamePattern = Pattern.compile(patterns[ReverseLookupSite.FIRSTNAME]);
}
if (!patterns[ReverseLookupSite.LASTNAME].equals("")) {
lastnamePattern = Pattern.compile(patterns[ReverseLookupSite.LASTNAME]);
}
for (int line = 0; line < dataLength; line++) {
if (data[line] != null) {
int spaceAlternative = 160;
data[line] = data[line].replaceAll(new Character((char) spaceAlternative).toString(), " ");
if (lastnamePattern != null) {
lastnameMatcher = lastnamePattern.matcher(data[line]);
if (lastnameMatcher.find()) {
str = "";
for (int k = 1; k <= lastnameMatcher.groupCount(); k++) {
if (lastnameMatcher.group(k) != null) str = str + lastnameMatcher.group(k).trim() + " ";
}
lastname = JFritzUtils.removeLeadingSpaces(HTMLUtil.stripEntities(str));
lastname = lastname.trim();
lastname = lastname.replaceAll(",", "");
lastname = lastname.replaceAll("%20", " ");
lastname = JFritzUtils.replaceSpecialCharsUTF(lastname);
lastname = JFritzUtils.removeLeadingSpaces(HTMLUtil.stripEntities(lastname));
lastname = JFritzUtils.removeDuplicateWhitespace(lastname);
if ("lastname".equals(patterns[ReverseLookupSite.FIRSTOCCURANCE])) {
p = new Person();
p.addNumber(number.getIntNumber(), "home");
foundPersons.add(p);
}
if (p != null) {
p.setLastName(lastname);
}
}
}
yield();
if (firstnamePattern != null) {
firstnameMatcher = firstnamePattern.matcher(data[line]);
if (firstnameMatcher.find()) {
str = "";
for (int k = 1; k <= firstnameMatcher.groupCount(); k++) {
if (firstnameMatcher.group(k) != null) str = str + firstnameMatcher.group(k).trim() + " ";
}
firstname = JFritzUtils.removeLeadingSpaces(HTMLUtil.stripEntities(str));
firstname = firstname.trim();
firstname = firstname.replaceAll(",", "");
firstname = firstname.replaceAll("%20", " ");
firstname = JFritzUtils.replaceSpecialCharsUTF(firstname);
firstname = JFritzUtils.removeLeadingSpaces(HTMLUtil.stripEntities(firstname));
firstname = JFritzUtils.removeDuplicateWhitespace(firstname);
if ("firstname".equals(patterns[ReverseLookupSite.FIRSTOCCURANCE])) {
p = new Person();
p.addNumber(number.getIntNumber(), "home");
foundPersons.add(p);
}
if (p != null) {
p.setFirstName(firstname);
}
}
}
yield();
if (namePattern != null) {
nameMatcher = namePattern.matcher(data[line]);
if (nameMatcher.find()) {
str = "";
for (int k = 1; k <= nameMatcher.groupCount(); k++) {
if (nameMatcher.group(k) != null) str = str + nameMatcher.group(k).trim() + " ";
}
String[] split;
split = str.split(" ", 2);
lastname = JFritzUtils.removeLeadingSpaces(HTMLUtil.stripEntities(split[0]));
lastname = lastname.trim();
lastname = lastname.replaceAll(",", "");
lastname = lastname.replaceAll("%20", " ");
lastname = JFritzUtils.replaceSpecialCharsUTF(lastname);
lastname = JFritzUtils.removeLeadingSpaces(HTMLUtil.stripEntities(lastname));
lastname = JFritzUtils.removeDuplicateWhitespace(lastname);
if (split[1].length() > 0) {
firstname = HTMLUtil.stripEntities(split[1]);
if ((firstname.indexOf(" ") > -1) && (firstname.indexOf(" u.") == -1)) {
company = JFritzUtils.removeLeadingSpaces(firstname.substring(firstname.indexOf(" ")).trim());
firstname = JFritzUtils.removeLeadingSpaces(firstname.substring(0, firstname.indexOf(" ")).trim());
} else {
firstname = JFritzUtils.removeLeadingSpaces(firstname.replaceAll(" u. ", " und "));
}
}
firstname = firstname.replaceAll("%20", " ");
firstname = JFritzUtils.replaceSpecialCharsUTF(firstname);
firstname = JFritzUtils.removeLeadingSpaces(HTMLUtil.stripEntities(firstname));
firstname = JFritzUtils.removeDuplicateWhitespace(firstname);
firstname = firstname.trim();
company = company.replaceAll("%20", " ");
company = JFritzUtils.replaceSpecialCharsUTF(company);
company = JFritzUtils.removeLeadingSpaces(HTMLUtil.stripEntities(company));
company = JFritzUtils.removeDuplicateWhitespace(company);
company = company.trim();
if ("name".equals(patterns[ReverseLookupSite.FIRSTOCCURANCE])) {
p = new Person();
if (company.length() > 0) {
p.addNumber(number.getIntNumber(), "business");
} else {
p.addNumber(number.getIntNumber(), "home");
}
foundPersons.add(p);
}
if (p != null) {
p.setFirstName(firstname);
p.setLastName(lastname);
p.setCompany(company);
}
}
}
yield();
if (streetPattern != null) {
streetMatcher = streetPattern.matcher(data[line]);
if (streetMatcher.find()) {
str = "";
for (int k = 1; k <= streetMatcher.groupCount(); k++) {
if (streetMatcher.group(k) != null) str = str + streetMatcher.group(k).trim() + " ";
}
street = str.replaceAll("%20", " ");
street = JFritzUtils.replaceSpecialCharsUTF(street);
street = JFritzUtils.removeLeadingSpaces(HTMLUtil.stripEntities(street));
street = JFritzUtils.removeDuplicateWhitespace(street);
street = street.trim();
if ("street".equals(patterns[ReverseLookupSite.FIRSTOCCURANCE])) {
p = new Person();
p.addNumber(number.getIntNumber(), "home");
foundPersons.add(p);
}
if (p != null) {
p.setStreet(street);
}
}
}
yield();
if (cityPattern != null) {
cityMatcher = cityPattern.matcher(data[line]);
if (cityMatcher.find()) {
str = "";
for (int k = 1; k <= cityMatcher.groupCount(); k++) {
if (cityMatcher.group(k) != null) str = str + cityMatcher.group(k).trim() + " ";
}
city = str.replaceAll("%20", " ");
city = JFritzUtils.replaceSpecialCharsUTF(city);
city = JFritzUtils.removeLeadingSpaces(HTMLUtil.stripEntities(city));
city = JFritzUtils.removeDuplicateWhitespace(city);
city = city.trim();
if ("city".equals(patterns[ReverseLookupSite.FIRSTOCCURANCE])) {
p = new Person();
p.addNumber(number.getIntNumber(), "home");
foundPersons.add(p);
}
if (p != null) {
p.setCity(city);
}
}
}
yield();
if (zipcodePattern != null) {
zipcodeMatcher = zipcodePattern.matcher(data[line]);
if (zipcodeMatcher.find()) {
str = "";
for (int k = 1; k <= zipcodeMatcher.groupCount(); k++) {
if (zipcodeMatcher.group(k) != null) str = str + zipcodeMatcher.group(k).trim() + " ";
}
zipcode = str.replaceAll("%20", " ");
zipcode = JFritzUtils.replaceSpecialCharsUTF(zipcode);
zipcode = JFritzUtils.removeLeadingSpaces(HTMLUtil.stripEntities(zipcode));
zipcode = JFritzUtils.removeDuplicateWhitespace(zipcode);
zipcode = zipcode.trim();
if ("zipcode".equals(patterns[ReverseLookupSite.FIRSTOCCURANCE])) {
p = new Person();
p.addNumber(number.getIntNumber(), "home");
foundPersons.add(p);
}
if (p != null) {
p.setPostalCode(zipcode);
}
}
}
}
}
if (!firstname.equals("") || !lastname.equals("") || !company.equals("")) break;
}
yield();
if (!firstname.equals("") || !lastname.equals("") || !company.equals("")) {
if (city.equals("")) {
if (number.getCountryCode().equals(ReverseLookup.GERMANY_CODE)) city = ReverseLookupGermany.getCity(nummer); else if (number.getCountryCode().equals(ReverseLookup.AUSTRIA_CODE)) city = ReverseLookupAustria.getCity(nummer); else if (number.getCountryCode().startsWith(ReverseLookup.USA_CODE)) city = ReverseLookupUnitedStates.getCity(nummer); else if (number.getCountryCode().startsWith(ReverseLookup.TURKEY_CODE)) city = ReverseLookupTurkey.getCity(nummer);
}
return foundPersons.get(0);
}
} catch (IOException e1) {
Debug.error("Error while retrieving " + urlstr);
}
}
} catch (MalformedURLException e) {
Debug.error("URL invalid: " + urlstr);
}
}
yield();
Debug.warning("No match for " + nummer + " found");
if (city.equals("")) {
if (number.getCountryCode().equals(ReverseLookup.GERMANY_CODE)) city = ReverseLookupGermany.getCity(nummer); else if (number.getCountryCode().equals(ReverseLookup.AUSTRIA_CODE)) city = ReverseLookupAustria.getCity(nummer); else if (number.getCountryCode().startsWith(ReverseLookup.USA_CODE)) city = ReverseLookupUnitedStates.getCity(nummer); else if (number.getCountryCode().startsWith(ReverseLookup.TURKEY_CODE)) city = ReverseLookupTurkey.getCity(nummer);
}
Person p = new Person("", "", "", "", "", city, "", "");
p.addNumber(number.getAreaNumber(), "home");
return p;
} else {
Debug.warning("No reverse lookup sites for: " + number.getCountryCode());
Person p = new Person();
p.addNumber(number.getAreaNumber(), "home");
if (number.getCountryCode().equals(ReverseLookup.GERMANY_CODE)) city = ReverseLookupGermany.getCity(number.getIntNumber()); else if (number.getCountryCode().equals(ReverseLookup.AUSTRIA_CODE)) city = ReverseLookupAustria.getCity(number.getIntNumber()); else if (number.getCountryCode().startsWith(ReverseLookup.USA_CODE)) city = ReverseLookupUnitedStates.getCity(number.getIntNumber()); else if (number.getCountryCode().startsWith(ReverseLookup.TURKEY_CODE)) city = ReverseLookupTurkey.getCity(number.getIntNumber());
p.setCity(city);
return p;
}
return new Person("not found", "Person");
}
| private void copyFile(File sourceFile, File destFile) throws IOException {
if (!sourceFile.exists()) {
return;
}
if (!destFile.exists()) {
destFile.createNewFile();
}
FileChannel source = null;
FileChannel destination = null;
source = new FileInputStream(sourceFile).getChannel();
destination = new FileOutputStream(destFile).getChannel();
if (destination != null && source != null) {
destination.transferFrom(source, 0, source.size());
}
if (source != null) {
source.close();
}
if (destination != null) {
destination.close();
}
}
| false |
14 | 13,041,693 | 116,038 | @Override
public void vote(String urlString, Map<String, String> headData, Map<String, String> paramData) {
HttpURLConnection httpConn = null;
try {
URL url = new URL(urlString);
httpConn = (HttpURLConnection) url.openConnection();
String cookies = getCookies(httpConn);
System.out.println(cookies);
BufferedReader post = new BufferedReader(new InputStreamReader(httpConn.getInputStream(), "GB2312"));
String text = null;
while ((text = post.readLine()) != null) {
System.out.println(text);
}
} catch (MalformedURLException e) {
e.printStackTrace();
throw new VoteBeanException("网址不正确", e);
} catch (IOException e) {
e.printStackTrace();
throw new VoteBeanException("不能打开网址", e);
}
}
| private static void readAndRewrite(File inFile, File outFile) throws IOException {
ImageInputStream iis = ImageIO.createImageInputStream(new BufferedInputStream(new FileInputStream(inFile)));
DcmParser dcmParser = DcmParserFactory.getInstance().newDcmParser(iis);
Dataset ds = DcmObjectFactory.getInstance().newDataset();
dcmParser.setDcmHandler(ds.getDcmHandler());
dcmParser.parseDcmFile(null, Tags.PixelData);
PixelDataReader pdReader = pdFact.newReader(ds, iis, dcmParser.getDcmDecodeParam().byteOrder, dcmParser.getReadVR());
System.out.println("reading " + inFile + "...");
pdReader.readPixelData(false);
ImageOutputStream out = ImageIO.createImageOutputStream(new BufferedOutputStream(new FileOutputStream(outFile)));
DcmEncodeParam dcmEncParam = DcmEncodeParam.IVR_LE;
ds.writeDataset(out, dcmEncParam);
ds.writeHeader(out, dcmEncParam, Tags.PixelData, dcmParser.getReadVR(), dcmParser.getReadLength());
System.out.println("writing " + outFile + "...");
PixelDataWriter pdWriter = pdFact.newWriter(pdReader.getPixelDataArray(), false, ds, out, dcmParser.getDcmDecodeParam().byteOrder, dcmParser.getReadVR());
pdWriter.writePixelData();
out.flush();
out.close();
System.out.println("done!");
}
| false |
15 | 14,157,859 | 3,791,822 | static void copyFile(File file, File file1) throws IOException {
byte abyte0[] = new byte[512];
FileInputStream fileinputstream = new FileInputStream(file);
FileOutputStream fileoutputstream = new FileOutputStream(file1);
int i;
while ((i = fileinputstream.read(abyte0)) > 0) fileoutputstream.write(abyte0, 0, i);
fileinputstream.close();
fileoutputstream.close();
}
| public Void doInBackground() {
setProgress(0);
for (int i = 0; i < uploadFiles.size(); i++) {
String filePath = uploadFiles.elementAt(i).getFilePath();
String fileName = uploadFiles.elementAt(i).getFileName();
String fileMsg = "Uploading file " + (i + 1) + "/" + uploadFiles.size() + "\n";
this.publish(fileMsg);
try {
File inFile = new File(filePath);
FileInputStream in = new FileInputStream(inFile);
byte[] inBytes = new byte[(int) chunkSize];
int count = 1;
int maxCount = (int) (inFile.length() / chunkSize);
if (inFile.length() % chunkSize > 0) {
maxCount++;
}
int readCount = 0;
readCount = in.read(inBytes);
while (readCount > 0) {
File splitFile = File.createTempFile("upl", null, null);
String splitName = splitFile.getPath();
FileOutputStream out = new FileOutputStream(splitFile);
out.write(inBytes, 0, readCount);
out.close();
boolean chunkFinal = (count == maxCount);
fileMsg = " - Sending chunk " + count + "/" + maxCount + ": ";
this.publish(fileMsg);
boolean uploadSuccess = false;
int uploadTries = 0;
while (!uploadSuccess && uploadTries <= 5) {
uploadTries++;
boolean uploadStatus = upload(splitName, fileName, count, chunkFinal);
if (uploadStatus) {
fileMsg = "OK\n";
this.publish(fileMsg);
uploadSuccess = true;
} else {
fileMsg = "ERROR\n";
this.publish(fileMsg);
uploadSuccess = false;
}
}
if (!uploadSuccess) {
fileMsg = "There was an error uploading your files. Please let the pipeline administrator know about this problem. Cut and paste the messages in this box, and supply them.\n";
this.publish(fileMsg);
errorFlag = true;
return null;
}
float thisProgress = (count * 100) / (maxCount);
float completeProgress = (i * (100 / uploadFiles.size()));
float totalProgress = completeProgress + (thisProgress / uploadFiles.size());
setProgress((int) totalProgress);
splitFile.delete();
readCount = in.read(inBytes);
count++;
}
} catch (Exception e) {
this.publish(e.toString());
}
}
return null;
}
| true |
16 | 23,270,032 | 21,907,871 | public void checkin(Object _document) {
this.document = (Document) _document;
synchronized (url) {
OutputStream outputStream = null;
try {
if ("file".equals(url.getProtocol())) {
outputStream = new FileOutputStream(url.getFile());
} else {
URLConnection connection = url.openConnection();
connection.setDoOutput(true);
outputStream = connection.getOutputStream();
}
new XMLOutputter(" ", true).output(this.document, outputStream);
outputStream.flush();
outputStream.close();
} catch (IOException e) {
e.printStackTrace();
}
}
}
| public static void extractFile(String jarArchive, String fileToExtract, String destination) {
FileWriter writer = null;
ZipInputStream zipStream = null;
try {
FileInputStream inputStream = new FileInputStream(jarArchive);
BufferedInputStream bufferedStream = new BufferedInputStream(inputStream);
zipStream = new ZipInputStream(bufferedStream);
writer = new FileWriter(new File(destination));
ZipEntry zipEntry = null;
while ((zipEntry = zipStream.getNextEntry()) != null) {
if (zipEntry.getName().equals(fileToExtract)) {
int size = (int) zipEntry.getSize();
for (int i = 0; i < size; i++) {
writer.write(zipStream.read());
}
}
}
} catch (IOException e) {
e.printStackTrace();
} finally {
if (zipStream != null) try {
zipStream.close();
} catch (IOException e) {
e.printStackTrace();
}
if (writer != null) try {
writer.close();
} catch (IOException e) {
e.printStackTrace();
}
}
}
| false |
17 | 17,586,131 | 14,533,184 | protected void update(String sql, Object[] args) {
Connection conn = null;
PreparedStatement pstmt = null;
try {
conn = JdbcUtils.getConnection();
conn.setAutoCommit(false);
pstmt = conn.prepareStatement(sql);
this.setParameters(pstmt, args);
pstmt.executeUpdate();
conn.commit();
conn.setAutoCommit(true);
} catch (SQLException e) {
try {
if (conn != null) {
conn.rollback();
conn.setAutoCommit(true);
}
} catch (SQLException ex) {
ex.printStackTrace();
}
throw new JdbcDaoException(e.getMessage(), e);
} finally {
JdbcUtils.free(pstmt, conn);
}
}
| public boolean delete(int id) {
boolean deletionOk = false;
Connection conn = null;
try {
conn = db.getConnection();
conn.setAutoCommit(false);
String sql = "DELETE FROM keyphrases WHERE website_id=?";
PreparedStatement ps = conn.prepareStatement(sql);
ps.setInt(1, id);
deletionOk = ps.executeUpdate() == 1;
ps.close();
sql = "DELETE FROM websites WHERE id=?";
ps = conn.prepareStatement(sql);
ps.setInt(1, id);
boolean success = ps.executeUpdate() == 1;
deletionOk = deletionOk && success;
ps.close();
conn.commit();
conn.setAutoCommit(true);
} catch (SQLException sqle) {
try {
conn.rollback();
conn.setAutoCommit(true);
} catch (SQLException sex) {
throw new OsseoFailure("SQL error: roll back failed. ", sex);
}
throw new OsseoFailure("SQL error: cannot remove website with id " + id + ".", sqle);
} finally {
db.putConnection(conn);
}
return deletionOk;
}
| true |
18 | 18,865,693 | 1,477,578 | private static void copyFile(File inputFile, File outputFile) throws IOException {
FileReader in = new FileReader(inputFile);
FileWriter out = new FileWriter(outputFile);
int c;
while ((c = in.read()) != -1) out.write(c);
in.close();
out.close();
}
| public static void copy(FileInputStream source, FileOutputStream dest) throws IOException {
FileChannel in = null, out = null;
try {
in = source.getChannel();
out = dest.getChannel();
long size = in.size();
MappedByteBuffer buf = in.map(FileChannel.MapMode.READ_ONLY, 0, size);
out.write(buf);
} finally {
if (in != null) in.close();
if (out != null) out.close();
}
}
| true |
19 | 5,506,807 | 10,176,882 | public void testPreparedStatement0009() throws Exception {
Statement stmt = con.createStatement();
stmt.executeUpdate("create table #t0009 " + " (i integer not null, " + " s char(10) not null) ");
con.setAutoCommit(false);
PreparedStatement pstmt = con.prepareStatement("insert into #t0009 values (?, ?)");
int rowsToAdd = 8;
final String theString = "abcdefghijklmnopqrstuvwxyz";
int count = 0;
for (int i = 1; i <= rowsToAdd; i++) {
pstmt.setInt(1, i);
pstmt.setString(2, theString.substring(0, i));
count += pstmt.executeUpdate();
}
pstmt.close();
assertEquals(count, rowsToAdd);
con.rollback();
ResultSet rs = stmt.executeQuery("select s, i from #t0009");
assertNotNull(rs);
count = 0;
while (rs.next()) {
count++;
assertEquals(rs.getString(1).trim().length(), rs.getInt(2));
}
assertEquals(count, 0);
con.commit();
pstmt = con.prepareStatement("insert into #t0009 values (?, ?)");
rowsToAdd = 6;
count = 0;
for (int i = 1; i <= rowsToAdd; i++) {
pstmt.setInt(1, i);
pstmt.setString(2, theString.substring(0, i));
count += pstmt.executeUpdate();
}
assertEquals(count, rowsToAdd);
con.commit();
pstmt.close();
rs = stmt.executeQuery("select s, i from #t0009");
count = 0;
while (rs.next()) {
count++;
assertEquals(rs.getString(1).trim().length(), rs.getInt(2));
}
assertEquals(count, rowsToAdd);
con.commit();
stmt.close();
con.setAutoCommit(true);
}
| @SuppressWarnings("unchecked")
protected void processDownloadAction(HttpServletRequest request, HttpServletResponse response) throws Exception {
File transformationFile = new File(xslBase, "file-info.xsl");
HashMap<String, Object> params = new HashMap<String, Object>();
params.putAll(request.getParameterMap());
params.put("{" + Definitions.CONFIGURATION_NAMESPACE + "}configuration", configuration);
params.put("{" + Definitions.REQUEST_NAMESPACE + "}request", request);
params.put("{" + Definitions.RESPONSE_NAMESPACE + "}response", response);
params.put("{" + Definitions.SESSION_NAMESPACE + "}session", request.getSession());
params.put("{" + Definitions.INFOFUZE_NAMESPACE + "}development-mode", new Boolean(Config.getInstance().isDevelopmentMode()));
Transformer transformer = new Transformer();
transformer.setTransformationFile(transformationFile);
transformer.setParams(params);
transformer.setTransformMode(TransformMode.NORMAL);
transformer.setConfiguration(configuration);
transformer.setErrorListener(new TransformationErrorListener(response));
transformer.setLogInfo(false);
DataSourceIf dataSource = new NullSource();
Document fileInfoDoc = XmlUtils.getEmptyDOM();
DOMResult result = new DOMResult(fileInfoDoc);
transformer.transform((Source) dataSource, result);
Element documentElement = fileInfoDoc.getDocumentElement();
if (documentElement.getLocalName().equals("null")) {
response.sendError(HttpServletResponse.SC_UNAUTHORIZED);
return;
}
InputStream is = null;
try {
XPath xpath = XPathFactory.newInstance().newXPath();
String sourceType = XPathUtils.getStringValue(xpath, "source-type", documentElement, null);
String location = XPathUtils.getStringValue(xpath, "location", documentElement, null);
String fileName = XPathUtils.getStringValue(xpath, "file-name", documentElement, null);
String mimeType = XPathUtils.getStringValue(xpath, "mime-type", documentElement, null);
String encoding = XPathUtils.getStringValue(xpath, "encoding", documentElement, null);
if (StringUtils.equals(sourceType, "cifsSource")) {
String domain = XPathUtils.getStringValue(xpath, "domain", documentElement, null);
String userName = XPathUtils.getStringValue(xpath, "username", documentElement, null);
String password = XPathUtils.getStringValue(xpath, "password", documentElement, null);
URI uri = new URI(location);
if (StringUtils.isNotBlank(userName)) {
String userInfo = "";
if (StringUtils.isNotBlank(domain)) {
userInfo = userInfo + domain + ";";
}
userInfo = userInfo + userName;
if (StringUtils.isNotBlank(password)) {
userInfo = userInfo + ":" + password;
}
uri = new URI(uri.getScheme(), userInfo, uri.getHost(), uri.getPort(), uri.getPath(), uri.getQuery(), uri.getFragment());
}
SmbFile smbFile = new SmbFile(uri.toURL());
is = new SmbFileInputStream(smbFile);
} else if (StringUtils.equals(sourceType, "localFileSystemSource")) {
File file = new File(location);
is = new FileInputStream(file);
} else {
logger.error("Source type \"" + ((sourceType != null) ? sourceType : "") + "\" not supported");
response.sendError(HttpServletResponse.SC_INTERNAL_SERVER_ERROR);
return;
}
if (StringUtils.isBlank(mimeType) && StringUtils.isBlank(encoding)) {
response.setContentType(Definitions.MIMETYPE_BINARY);
} else if (StringUtils.isBlank(encoding)) {
response.setContentType(mimeType);
} else {
response.setContentType(mimeType + ";charset=" + encoding);
}
if (request.getParameterMap().containsKey(Definitions.REQUEST_PARAMNAME_DOWNLOAD)) {
response.setHeader("Content-Disposition", "attachment; filename=" + fileName);
}
IOUtils.copy(new BufferedInputStream(is), response.getOutputStream());
} finally {
if (is != null) {
is.close();
}
}
}
| false |
20 | 2,746,011 | 5,105,540 | @RequestMapping(value = "/privatefiles/{file_name}")
public void getFile(@PathVariable("file_name") String fileName, HttpServletResponse response, Principal principal) {
try {
Boolean validUser = false;
final String currentUser = principal.getName();
Authentication auth = SecurityContextHolder.getContext().getAuthentication();
if (!auth.getPrincipal().equals(new String("anonymousUser"))) {
MetabolightsUser metabolightsUser = (MetabolightsUser) auth.getPrincipal();
if (metabolightsUser != null && metabolightsUser.isCurator()) validUser = true;
}
if (currentUser != null) {
Study study = studyService.getBiiStudy(fileName, true);
Collection<User> users = study.getUsers();
Iterator<User> iter = users.iterator();
while (iter.hasNext()) {
User user = iter.next();
if (user.getUserName().equals(currentUser)) {
validUser = true;
break;
}
}
}
if (!validUser) throw new RuntimeException(PropertyLookup.getMessage("Entry.notAuthorised"));
try {
InputStream is = new FileInputStream(privateFtpDirectory + fileName + ".zip");
response.setContentType("application/zip");
IOUtils.copy(is, response.getOutputStream());
} catch (Exception e) {
throw new RuntimeException(PropertyLookup.getMessage("Entry.fileMissing"));
}
response.flushBuffer();
} catch (IOException ex) {
logger.info("Error writing file to output stream. Filename was '" + fileName + "'");
throw new RuntimeException("IOError writing file to output stream");
}
}
| public AudioInputStream getAudioInputStream(URL url) throws UnsupportedAudioFileException, IOException {
if (TDebug.TraceAudioFileReader) {
TDebug.out("MpegAudioFileReader.getAudioInputStream(URL): begin");
}
long lFileLengthInBytes = AudioSystem.NOT_SPECIFIED;
URLConnection conn = url.openConnection();
boolean isShout = false;
int toRead = 4;
byte[] head = new byte[toRead];
conn.setRequestProperty("Icy-Metadata", "1");
BufferedInputStream bInputStream = new BufferedInputStream(conn.getInputStream());
bInputStream.mark(toRead);
int read = bInputStream.read(head, 0, toRead);
if ((read > 2) && (((head[0] == 'I') | (head[0] == 'i')) && ((head[1] == 'C') | (head[1] == 'c')) && ((head[2] == 'Y') | (head[2] == 'y')))) isShout = true;
bInputStream.reset();
InputStream inputStream = null;
if (isShout == true) {
IcyInputStream icyStream = new IcyInputStream(bInputStream);
icyStream.addTagParseListener(IcyListener.getInstance());
inputStream = icyStream;
} else {
String metaint = conn.getHeaderField("icy-metaint");
if (metaint != null) {
IcyInputStream icyStream = new IcyInputStream(bInputStream, metaint);
icyStream.addTagParseListener(IcyListener.getInstance());
inputStream = icyStream;
} else {
inputStream = bInputStream;
}
}
AudioInputStream audioInputStream = null;
try {
audioInputStream = getAudioInputStream(inputStream, lFileLengthInBytes);
} catch (UnsupportedAudioFileException e) {
inputStream.close();
throw e;
} catch (IOException e) {
inputStream.close();
throw e;
}
if (TDebug.TraceAudioFileReader) {
TDebug.out("MpegAudioFileReader.getAudioInputStream(URL): end");
}
return audioInputStream;
}
| false |
21 | 3,287,282 | 13,431,536 | public void googleImageSearch(String start) {
try {
String u = "http://images.google.com/images?q=" + custom + start;
if (u.contains(" ")) {
u = u.replace(" ", "+");
}
URL url = new URL(u);
HttpURLConnection httpcon = (HttpURLConnection) url.openConnection();
httpcon.addRequestProperty("User-Agent", "Mozilla/4.76");
BufferedReader readIn = new BufferedReader(new InputStreamReader(httpcon.getInputStream()));
googleImages.clear();
String text = "";
String lin = "";
while ((lin = readIn.readLine()) != null) {
text += lin;
}
readIn.close();
if (text.contains("\n")) {
text = text.replace("\n", "");
}
String[] array = text.split("\\Qhref=\"/imgres?imgurl=\\E");
for (String s : array) {
if (s.startsWith("http://") || s.startsWith("https://") && s.contains("&")) {
String s1 = s.substring(0, s.indexOf("&"));
googleImages.add(s1);
}
}
} catch (Exception ex4) {
MusicBoxView.showErrorDialog(ex4);
}
jButton4.setEnabled(true);
jButton2.setEnabled(true);
getContentPane().remove(jLabel1);
ImageIcon icon;
try {
icon = new ImageIcon(new URL(googleImages.elementAt(googleImageLocation)));
int h = icon.getIconHeight();
int w = icon.getIconWidth();
jLabel1.setSize(w, h);
jLabel1.setIcon(icon);
add(jLabel1, BorderLayout.CENTER);
} catch (MalformedURLException ex) {
MusicBoxView.showErrorDialog(ex);
jLabel1.setIcon(MusicBoxView.noImage);
}
add(jPanel1, BorderLayout.PAGE_END);
pack();
}
| @Override
public int updateStatus(UserInfo userInfo, String status) throws Exception {
OAuthConsumer consumer = SnsConstant.getOAuthConsumer(SnsConstant.SOHU);
consumer.setTokenWithSecret(userInfo.getAccessToken(), userInfo.getAccessSecret());
try {
URL url = new URL(SnsConstant.SOHU_UPDATE_STATUS_URL);
HttpURLConnection request = (HttpURLConnection) url.openConnection();
request.setDoOutput(true);
request.setRequestMethod("POST");
HttpParameters para = new HttpParameters();
para.put("status", StringUtils.utf8Encode(status).replaceAll("\\+", "%20"));
consumer.setAdditionalParameters(para);
consumer.sign(request);
OutputStream ot = request.getOutputStream();
ot.write(("status=" + URLEncoder.encode(status, "utf-8")).replaceAll("\\+", "%20").getBytes());
ot.flush();
ot.close();
System.out.println("Sending request...");
request.connect();
System.out.println("Response: " + request.getResponseCode() + " " + request.getResponseMessage());
BufferedReader reader = new BufferedReader(new InputStreamReader(request.getInputStream()));
String b = null;
while ((b = reader.readLine()) != null) {
System.out.println(b);
}
return SnsConstant.SOHU_UPDATE_STATUS_SUCC_WHAT;
} catch (Exception e) {
SnsConstant.SOHU_OPERATOR_FAIL_REASON = processException(e.getMessage());
return SnsConstant.SOHU_UPDATE_STATUS_FAIL_WHAT;
}
}
| false |
22 | 16,744,397 | 18,315,736 | public void copyToZip(ZipOutputStream zout, String entryName) throws IOException {
close();
ZipEntry entry = new ZipEntry(entryName);
zout.putNextEntry(entry);
if (!isEmpty() && this.tmpFile.exists()) {
InputStream in = new FileInputStream(this.tmpFile);
IOUtils.copyTo(in, zout);
in.close();
}
zout.flush();
zout.closeEntry();
delete();
}
| private List<String> getTaxaList() {
List<String> taxa = new Vector<String>();
String domain = m_domain.getStringValue();
String id = "";
if (domain.equalsIgnoreCase("Eukaryota")) id = "eukaryota";
try {
URL url = new URL("http://www.ebi.ac.uk/genomes/" + id + ".details.txt");
BufferedReader reader = new BufferedReader(new InputStreamReader(url.openStream()));
String link = "";
String key = "";
String name = "";
int counter = 0;
String line = "";
reader.readLine();
while ((line = reader.readLine()) != null) {
String[] st = line.split("\t");
ena_details ena = new ena_details(st[0], st[1], st[2], st[3], st[4]);
ENADataHolder.instance().put(ena.desc, ena);
taxa.add(ena.desc);
}
reader.close();
} catch (MalformedURLException e) {
e.printStackTrace();
} catch (IOException e) {
e.printStackTrace();
}
return taxa;
}
| false |
23 | 18,269,744 | 10,140,251 | public static boolean encodeFileToFile(String infile, String outfile) {
boolean success = false;
java.io.InputStream in = null;
java.io.OutputStream out = null;
try {
in = new Base64.InputStream(new java.io.BufferedInputStream(new java.io.FileInputStream(infile)), Base64.ENCODE);
out = new java.io.BufferedOutputStream(new java.io.FileOutputStream(outfile));
byte[] buffer = new byte[65536];
int read = -1;
while ((read = in.read(buffer)) >= 0) {
out.write(buffer, 0, read);
}
success = true;
} catch (java.io.IOException exc) {
exc.printStackTrace();
} finally {
try {
in.close();
} catch (Exception exc) {
}
try {
out.close();
} catch (Exception exc) {
}
}
return success;
}
| protected String contentString() {
String result = null;
URL url;
String encoding = null;
try {
url = url();
URLConnection connection = url.openConnection();
connection.setDoInput(true);
connection.setDoOutput(false);
connection.setUseCaches(false);
for (Enumeration e = bindingKeys().objectEnumerator(); e.hasMoreElements(); ) {
String key = (String) e.nextElement();
if (key.startsWith("?")) {
connection.setRequestProperty(key.substring(1), valueForBinding(key).toString());
}
}
if (connection.getContentEncoding() != null) {
encoding = connection.getContentEncoding();
}
if (encoding == null) {
encoding = (String) valueForBinding("encoding");
}
if (encoding == null) {
encoding = "UTF-8";
}
InputStream stream = connection.getInputStream();
byte bytes[] = ERXFileUtilities.bytesFromInputStream(stream);
stream.close();
result = new String(bytes, encoding);
} catch (IOException ex) {
throw NSForwardException._runtimeExceptionForThrowable(ex);
}
return result;
}
| false |
24 | 14,876,163 | 3,260,787 | public static void copyFile(File in, File out) throws IOException {
FileChannel inChannel = new FileInputStream(in).getChannel();
FileChannel outChannel = new FileOutputStream(out).getChannel();
try {
inChannel.transferTo(0, inChannel.size(), outChannel);
} catch (IOException e) {
throw e;
} finally {
if (inChannel != null) inChannel.close();
if (outChannel != null) outChannel.close();
}
}
| public CopyAllDataToOtherFolderResponse CopyAllDataToOtherFolder(DPWSContext context, CopyAllDataToOtherFolder CopyAllDataInps) throws DPWSException {
CopyAllDataToOtherFolderResponse cpyRp = new CopyAllDataToOtherFolderResponseImpl();
int hany = 0;
String errorMsg = null;
try {
if ((rootDir == null) || (rootDir.length() == (-1))) {
errorMsg = LocalStorVerify.ISNT_ROOTFLD;
} else {
String sourceN = CopyAllDataInps.getSourceName();
String targetN = CopyAllDataInps.getTargetName();
if (LocalStorVerify.isValid(sourceN) && LocalStorVerify.isValid(targetN)) {
String srcDir = rootDir + File.separator + sourceN;
String trgDir = rootDir + File.separator + targetN;
if (LocalStorVerify.isLength(srcDir) && LocalStorVerify.isLength(trgDir)) {
for (File fs : new File(srcDir).listFiles()) {
File ft = new File(trgDir + '\\' + fs.getName());
FileChannel in = null, out = null;
try {
in = new FileInputStream(fs).getChannel();
out = new FileOutputStream(ft).getChannel();
long size = in.size();
MappedByteBuffer buf = in.map(FileChannel.MapMode.READ_ONLY, 0, size);
out.write(buf);
} finally {
if (in != null) in.close();
if (out != null) out.close();
hany++;
}
}
} else {
errorMsg = LocalStorVerify.FLD_TOOLNG;
}
} else {
errorMsg = LocalStorVerify.ISNT_VALID;
}
}
} catch (Throwable tr) {
tr.printStackTrace();
errorMsg = tr.getMessage();
hany = (-1);
}
if (errorMsg != null) {
}
cpyRp.setNum(hany);
return cpyRp;
}
| true |
25 | 14,313,659 | 10,109,343 | private int writeTraceFile(final File destination_file, final String trace_file_name, final String trace_file_path) {
URL url = null;
BufferedInputStream is = null;
FileOutputStream fo = null;
BufferedOutputStream os = null;
int b = 0;
if (destination_file == null) {
return 0;
}
try {
url = new URL("http://" + trace_file_path + "/" + trace_file_name);
is = new BufferedInputStream(url.openStream());
fo = new FileOutputStream(destination_file);
os = new BufferedOutputStream(fo);
while ((b = is.read()) != -1) {
os.write(b);
}
os.flush();
is.close();
os.close();
} catch (Exception e) {
System.err.println(url.toString());
Utilities.unexpectedException(e, this, CONTACT);
return 0;
}
return 1;
}
| public void readData() throws IOException {
i = 0;
j = 0;
URL url = getClass().getResource("resources/tuneGridMaster.dat");
InputStream is = url.openStream();
InputStreamReader isr = new InputStreamReader(is);
BufferedReader br = new BufferedReader(isr);
s = br.readLine();
StringTokenizer st = new StringTokenizer(s);
tune_x[i][j] = Double.parseDouble(st.nextToken());
gridmin = tune_x[i][j];
temp_prev = tune_x[i][j];
tune_y[i][j] = Double.parseDouble(st.nextToken());
kd[i][j] = Double.parseDouble(st.nextToken());
kfs[i][j] = Double.parseDouble(st.nextToken());
kfl[i][j] = Double.parseDouble(st.nextToken());
kdee[i][j] = Double.parseDouble(st.nextToken());
kdc[i][j] = Double.parseDouble(st.nextToken());
kfc[i][j] = Double.parseDouble(st.nextToken());
j++;
int k = 0;
while ((s = br.readLine()) != null) {
st = new StringTokenizer(s);
temp_new = Double.parseDouble(st.nextToken());
if (temp_new != temp_prev) {
temp_prev = temp_new;
i++;
j = 0;
}
tune_x[i][j] = temp_new;
tune_y[i][j] = Double.parseDouble(st.nextToken());
kd[i][j] = Double.parseDouble(st.nextToken());
kfs[i][j] = Double.parseDouble(st.nextToken());
kfl[i][j] = Double.parseDouble(st.nextToken());
kdee[i][j] = Double.parseDouble(st.nextToken());
kdc[i][j] = Double.parseDouble(st.nextToken());
kfc[i][j] = Double.parseDouble(st.nextToken());
imax = i;
jmax = j;
j++;
k++;
}
gridmax = tune_x[i][j - 1];
}
| false |
26 | 13,745,376 | 10,567,003 | public IStatus runInUIThread(IProgressMonitor monitor) {
monitor.beginTask(Strings.MSG_CONNECT_SERVER, 3);
InputStream in = null;
try {
URL url = createOpenUrl(resource, pref);
if (url != null) {
URLConnection con = url.openConnection();
monitor.worked(1);
monitor.setTaskName(Strings.MSG_WAIT_FOR_SERVER);
con.connect();
in = con.getInputStream();
in.read();
monitor.worked(1);
monitor.setTaskName(NLS.bind(Strings.MSG_OPEN_URL, url));
open(url, resource.getProject(), pref);
monitor.worked(1);
}
} catch (ConnectException con) {
if (count < 3) {
ConnectAndOpenJob job = new ConnectAndOpenJob(resource, pref, ++count);
job.schedule(1000L);
} else {
Activator.log(con);
}
} catch (Exception e) {
Activator.log(e);
} finally {
Streams.close(in);
monitor.done();
}
return Status.OK_STATUS;
}
| private InputStream loadSource(String url) throws ClientProtocolException, IOException {
HttpClient httpclient = new DefaultHttpClient();
httpclient.getParams().setParameter(HTTP.USER_AGENT, "Mozilla/4.0 (compatible; MSIE 7.0b; Windows NT 6.0)");
HttpGet httpget = new HttpGet(url);
HttpResponse response = httpclient.execute(httpget);
HttpEntity entity = response.getEntity();
return entity.getContent();
}
| false |
27 | 22,075,089 | 20,623,710 | public static void executa(String arquivo, String filial, String ip) {
String drive = arquivo.substring(0, 2);
if (drive.indexOf(":") == -1) drive = "";
Properties p = Util.lerPropriedades(arquivo);
String servidor = p.getProperty("servidor");
String impressora = p.getProperty("fila");
String arqRel = new String(drive + p.getProperty("arquivo"));
String copias = p.getProperty("copias");
if (filial.equalsIgnoreCase(servidor)) {
Socket s = null;
int tentativas = 0;
boolean conectado = false;
while (!conectado) {
try {
tentativas++;
System.out.println("Tentando conectar " + ip + " (" + tentativas + ")");
s = new Socket(ip, 7000);
conectado = s.isConnected();
} catch (ConnectException ce) {
System.err.println(ce.getMessage());
System.err.println(ce.getCause());
} catch (UnknownHostException uhe) {
System.err.println(uhe.getMessage());
} catch (IOException ioe) {
System.err.println(ioe.getMessage());
}
}
FileInputStream in = null;
BufferedOutputStream out = null;
try {
in = new FileInputStream(new File(arqRel));
out = new BufferedOutputStream(new GZIPOutputStream(s.getOutputStream()));
} catch (FileNotFoundException e3) {
e3.printStackTrace();
} catch (IOException e3) {
e3.printStackTrace();
}
String arqtr = arqRel.substring(2);
System.out.println("Proximo arquivo: " + arqRel + " ->" + arqtr);
while (arqtr.length() < 30) arqtr += " ";
while (impressora.length() < 30) impressora += " ";
byte aux[] = new byte[30];
byte cop[] = new byte[2];
try {
aux = arqtr.getBytes("UTF8");
out.write(aux);
aux = impressora.getBytes("UTF8");
out.write(aux);
cop = copias.getBytes("UTF8");
out.write(cop);
out.flush();
} catch (UnsupportedEncodingException e2) {
e2.printStackTrace();
} catch (IOException e2) {
e2.printStackTrace();
}
byte b[] = new byte[1024];
int nBytes;
try {
while ((nBytes = in.read(b)) != -1) out.write(b, 0, nBytes);
out.flush();
out.close();
in.close();
s.close();
} catch (IOException e1) {
e1.printStackTrace();
}
System.out.println("Arquivo " + arqRel + " foi transmitido. \n\n");
try {
Thread.sleep(1000);
} catch (InterruptedException e) {
e.printStackTrace();
}
SimpleDateFormat dfArq = new SimpleDateFormat("yyyy-MM-dd");
SimpleDateFormat dfLog = new SimpleDateFormat("yyyy-MM-dd HH:mm:ss");
String arqLog = "log" + filial + dfArq.format(new Date()) + ".txt";
PrintWriter pw = null;
try {
pw = new PrintWriter(new FileWriter(arqLog, true));
} catch (IOException e) {
e.printStackTrace();
}
pw.println("Arquivo: " + arquivo + " " + dfLog.format(new Date()));
pw.flush();
pw.close();
File f = new File(arquivo);
while (!f.delete()) {
System.out.println("Erro apagando " + arquivo);
}
}
}
| public static synchronized void repartition(File[] sourceFiles, File targetDirectory, String prefix, long maxUnitBases, long maxUnitEntries) throws Exception {
if (!targetDirectory.exists()) {
if (!targetDirectory.mkdirs()) throw new Exception("Could not create directory " + targetDirectory.getAbsolutePath());
}
File tmpFile = new File(targetDirectory, "tmp.fasta");
FileOutputStream fos = new FileOutputStream(tmpFile);
FileChannel fco = fos.getChannel();
for (File file : sourceFiles) {
FileInputStream fis = new FileInputStream(file);
FileChannel fci = fis.getChannel();
ByteBuffer buffer = ByteBuffer.allocate(64000);
while (fci.read(buffer) > 0) {
buffer.flip();
fco.write(buffer);
buffer.clear();
}
fci.close();
}
fco.close();
FastaFile fastaFile = new FastaFile(tmpFile);
fastaFile.split(targetDirectory, prefix, maxUnitBases, maxUnitEntries);
tmpFile.delete();
}
| true |
28 | 19,217,522 | 10,385,493 | boolean copyFileStructure(File oldFile, File newFile) {
if (oldFile == null || newFile == null) return false;
File searchFile = newFile;
do {
if (oldFile.equals(searchFile)) return false;
searchFile = searchFile.getParentFile();
} while (searchFile != null);
if (oldFile.isDirectory()) {
if (progressDialog != null) {
progressDialog.setDetailFile(oldFile, ProgressDialog.COPY);
}
if (simulateOnly) {
} else {
if (!newFile.mkdirs()) return false;
}
File[] subFiles = oldFile.listFiles();
if (subFiles != null) {
if (progressDialog != null) {
progressDialog.addWorkUnits(subFiles.length);
}
for (int i = 0; i < subFiles.length; i++) {
File oldSubFile = subFiles[i];
File newSubFile = new File(newFile, oldSubFile.getName());
if (!copyFileStructure(oldSubFile, newSubFile)) return false;
if (progressDialog != null) {
progressDialog.addProgress(1);
if (progressDialog.isCancelled()) return false;
}
}
}
} else {
if (simulateOnly) {
} else {
FileReader in = null;
FileWriter out = null;
try {
in = new FileReader(oldFile);
out = new FileWriter(newFile);
int count;
while ((count = in.read()) != -1) out.write(count);
} catch (FileNotFoundException e) {
return false;
} catch (IOException e) {
return false;
} finally {
try {
if (in != null) in.close();
if (out != null) out.close();
} catch (IOException e) {
return false;
}
}
}
}
return true;
}
| public void writeBack(File destinationFile, boolean makeCopy) throws IOException {
if (makeCopy) {
FileChannel sourceChannel = new java.io.FileInputStream(getFile()).getChannel();
FileChannel destinationChannel = new java.io.FileOutputStream(destinationFile).getChannel();
sourceChannel.transferTo(0, sourceChannel.size(), destinationChannel);
sourceChannel.close();
destinationChannel.close();
} else {
getFile().renameTo(destinationFile);
}
if (getExifTime() != null && getOriginalTime() != null && !getExifTime().equals(getOriginalTime())) {
String adjustArgument = "-ts" + m_dfJhead.format(getExifTime());
ProcessBuilder pb = new ProcessBuilder(m_tm.getJheadCommand(), adjustArgument, destinationFile.getAbsolutePath());
pb.directory(destinationFile.getParentFile());
System.out.println(pb.command().get(0) + " " + pb.command().get(1) + " " + pb.command().get(2));
final Process p = pb.start();
try {
p.waitFor();
} catch (InterruptedException e) {
e.printStackTrace();
}
}
}
| true |
29 | 7,681,426 | 11,717,079 | public void extractProfile(String parentDir, String fileName, String profileName) {
try {
byte[] buf = new byte[1024];
ZipInputStream zipinputstream = null;
ZipEntry zipentry;
if (createProfileDirectory(profileName, parentDir)) {
debug("the profile directory created .starting the profile extraction");
String profilePath = parentDir + File.separator + fileName;
zipinputstream = new ZipInputStream(new FileInputStream(profilePath));
zipentry = zipinputstream.getNextEntry();
while (zipentry != null) {
String entryName = zipentry.getName();
int n;
FileOutputStream fileoutputstream;
File newFile = new File(entryName);
String directory = newFile.getParent();
if (directory == null) {
if (newFile.isDirectory()) break;
}
fileoutputstream = new FileOutputStream(parentDir + File.separator + profileName + File.separator + newFile.getName());
while ((n = zipinputstream.read(buf, 0, 1024)) > -1) fileoutputstream.write(buf, 0, n);
fileoutputstream.close();
zipinputstream.closeEntry();
zipentry = zipinputstream.getNextEntry();
}
zipinputstream.close();
debug("deleting the profile.zip file");
File newFile = new File(profilePath);
if (newFile.delete()) {
debug("the " + "[" + profilePath + "]" + " deleted successfully");
} else {
debug("profile" + "[" + profilePath + "]" + "deletion fail");
throw new IllegalArgumentException("Error: deletion error!");
}
} else {
debug("error creating the profile directory");
}
} catch (Exception e) {
e.printStackTrace();
}
}
| void copyFile(File inputFile, File outputFile) {
try {
FileReader in;
in = new FileReader(inputFile);
FileWriter out = new FileWriter(outputFile);
int c;
while ((c = in.read()) != -1) out.write(c);
in.close();
out.close();
} catch (FileNotFoundException e) {
e.printStackTrace();
} catch (IOException e) {
e.printStackTrace();
}
}
| true |
30 | 8,831,301 | 8,365,268 | public void run() {
String s;
s = "";
try {
URL url = new URL("http://www.m-w.com/dictionary/" + word);
BufferedReader in = new BufferedReader(new InputStreamReader(url.openStream()));
String str;
while (((str = in.readLine()) != null) && (!stopped)) {
s = s + str;
}
in.close();
} catch (MalformedURLException e) {
} catch (IOException e) {
}
Pattern pattern = Pattern.compile("Main Entry:.+?<br>(.+?)</td>", Pattern.CASE_INSENSITIVE | Pattern.DOTALL);
Matcher matcher = pattern.matcher(s);
java.io.StringWriter wr = new java.io.StringWriter();
HTMLDocument doc = null;
HTMLEditorKit kit = (HTMLEditorKit) editor.getEditorKit();
try {
doc = (HTMLDocument) editor.getDocument();
} catch (Exception e) {
}
System.out.println(wr);
editor.setContentType("text/html");
if (matcher.find()) try {
kit.insertHTML(doc, editor.getCaretPosition(), "<HR>" + matcher.group(1) + "<HR>", 0, 0, null);
} catch (Exception e) {
System.out.println(e.getMessage());
} else try {
kit.insertHTML(doc, editor.getCaretPosition(), "<HR><FONT COLOR='RED'>NOT FOUND!!</FONT><HR>", 0, 0, null);
} catch (Exception e) {
System.out.println(e.getMessage());
}
button.setEnabled(true);
}
| public static String[] readStats() throws Exception {
URL url = null;
BufferedReader reader = null;
StringBuilder stringBuilder;
try {
url = new URL("http://localhost:" + port + webctx + "/shared/js/libOO/health_check.sjs");
HttpURLConnection connection = (HttpURLConnection) url.openConnection();
connection.setRequestMethod("GET");
connection.setReadTimeout(10 * 1000);
connection.connect();
reader = new BufferedReader(new InputStreamReader(connection.getInputStream()));
stringBuilder = new StringBuilder();
String line = null;
while ((line = reader.readLine()) != null) {
stringBuilder.append(line);
}
return stringBuilder.toString().split(",");
} catch (Exception e) {
e.printStackTrace();
throw e;
} finally {
if (reader != null) {
try {
reader.close();
} catch (IOException ioe) {
ioe.printStackTrace();
}
}
}
}
| true |
31 | 308,643 | 21,172,450 | public void convert(File src, File dest) throws IOException {
InputStream in = new BufferedInputStream(new FileInputStream(src));
DcmParser p = pfact.newDcmParser(in);
Dataset ds = fact.newDataset();
p.setDcmHandler(ds.getDcmHandler());
try {
FileFormat format = p.detectFileFormat();
if (format != FileFormat.ACRNEMA_STREAM) {
System.out.println("\n" + src + ": not an ACRNEMA stream!");
return;
}
p.parseDcmFile(format, Tags.PixelData);
if (ds.contains(Tags.StudyInstanceUID) || ds.contains(Tags.SeriesInstanceUID) || ds.contains(Tags.SOPInstanceUID) || ds.contains(Tags.SOPClassUID)) {
System.out.println("\n" + src + ": contains UIDs!" + " => probable already DICOM - do not convert");
return;
}
boolean hasPixelData = p.getReadTag() == Tags.PixelData;
boolean inflate = hasPixelData && ds.getInt(Tags.BitsAllocated, 0) == 12;
int pxlen = p.getReadLength();
if (hasPixelData) {
if (inflate) {
ds.putUS(Tags.BitsAllocated, 16);
pxlen = pxlen * 4 / 3;
}
if (pxlen != (ds.getInt(Tags.BitsAllocated, 0) >>> 3) * ds.getInt(Tags.Rows, 0) * ds.getInt(Tags.Columns, 0) * ds.getInt(Tags.NumberOfFrames, 1) * ds.getInt(Tags.NumberOfSamples, 1)) {
System.out.println("\n" + src + ": mismatch pixel data length!" + " => do not convert");
return;
}
}
ds.putUI(Tags.StudyInstanceUID, uid(studyUID));
ds.putUI(Tags.SeriesInstanceUID, uid(seriesUID));
ds.putUI(Tags.SOPInstanceUID, uid(instUID));
ds.putUI(Tags.SOPClassUID, classUID);
if (!ds.contains(Tags.NumberOfSamples)) {
ds.putUS(Tags.NumberOfSamples, 1);
}
if (!ds.contains(Tags.PhotometricInterpretation)) {
ds.putCS(Tags.PhotometricInterpretation, "MONOCHROME2");
}
if (fmi) {
ds.setFileMetaInfo(fact.newFileMetaInfo(ds, UIDs.ImplicitVRLittleEndian));
}
OutputStream out = new BufferedOutputStream(new FileOutputStream(dest));
try {
} finally {
ds.writeFile(out, encodeParam());
if (hasPixelData) {
if (!skipGroupLen) {
out.write(PXDATA_GROUPLEN);
int grlen = pxlen + 8;
out.write((byte) grlen);
out.write((byte) (grlen >> 8));
out.write((byte) (grlen >> 16));
out.write((byte) (grlen >> 24));
}
out.write(PXDATA_TAG);
out.write((byte) pxlen);
out.write((byte) (pxlen >> 8));
out.write((byte) (pxlen >> 16));
out.write((byte) (pxlen >> 24));
}
if (inflate) {
int b2, b3;
for (; pxlen > 0; pxlen -= 3) {
out.write(in.read());
b2 = in.read();
b3 = in.read();
out.write(b2 & 0x0f);
out.write(b2 >> 4 | ((b3 & 0x0f) << 4));
out.write(b3 >> 4);
}
} else {
for (; pxlen > 0; --pxlen) {
out.write(in.read());
}
}
out.close();
}
System.out.print('.');
} finally {
in.close();
}
}
| public static void unzip2(String strZipFile, String folder) throws IOException, ArchiveException {
FileUtil.fileExists(strZipFile, true);
final InputStream is = new FileInputStream(strZipFile);
ArchiveInputStream in = new ArchiveStreamFactory().createArchiveInputStream("zip", is);
ZipArchiveEntry entry = null;
OutputStream out = null;
while ((entry = (ZipArchiveEntry) in.getNextEntry()) != null) {
File zipPath = new File(folder);
File destinationFilePath = new File(zipPath, entry.getName());
destinationFilePath.getParentFile().mkdirs();
if (entry.isDirectory()) {
continue;
} else {
out = new FileOutputStream(new File(folder, entry.getName()));
IOUtils.copy(in, out);
out.close();
}
}
in.close();
}
| true |
32 | 11,322,573 | 3,224,152 | private void preprocessObjects(GeoObject[] objects) throws IOException {
System.out.println("objects.length " + objects.length);
for (int i = 0; i < objects.length; i++) {
String fileName = objects[i].getPath();
int dotindex = fileName.lastIndexOf(".");
dotindex = dotindex < 0 ? 0 : dotindex;
String tmp = dotindex < 1 ? fileName : fileName.substring(0, dotindex + 3) + "w";
System.out.println("i: " + " world filename " + tmp);
File worldFile = new File(tmp);
if (worldFile.exists()) {
BufferedReader worldFileReader = new BufferedReader(new InputStreamReader(new FileInputStream(worldFile)));
if (staticDebugOn) debug("b4nextline: ");
line = worldFileReader.readLine();
if (staticDebugOn) debug("line: " + line);
if (line != null) {
line = worldFileReader.readLine();
if (staticDebugOn) debug("line: " + line);
tokenizer = new StringTokenizer(line, " \n\t\r\"", false);
objects[i].setLon(Double.valueOf(tokenizer.nextToken()).doubleValue());
line = worldFileReader.readLine();
if (staticDebugOn) debug("line: " + line);
tokenizer = new StringTokenizer(line, " \n\t\r\"", false);
objects[i].setLat(Double.valueOf(tokenizer.nextToken()).doubleValue());
}
}
File file = new File(objects[i].getPath());
if (file.exists()) {
System.out.println("object src file found ");
int slashindex = fileName.lastIndexOf(java.io.File.separator);
slashindex = slashindex < 0 ? 0 : slashindex;
if (slashindex == 0) {
slashindex = fileName.lastIndexOf("/");
slashindex = slashindex < 0 ? 0 : slashindex;
}
tmp = slashindex < 1 ? fileName : fileName.substring(slashindex + 1, fileName.length());
System.out.println("filename " + destinationDirectory + XPlat.fileSep + tmp);
objects[i].setPath(tmp);
file = new File(fileName);
if (file.exists()) {
DataInputStream dataIn = new DataInputStream(new BufferedInputStream(new FileInputStream(fileName)));
DataOutputStream dataOut = new DataOutputStream(new BufferedOutputStream(new FileOutputStream(destinationDirectory + XPlat.fileSep + tmp)));
System.out.println("copying to " + destinationDirectory + XPlat.fileSep + tmp);
for (; ; ) {
try {
dataOut.writeShort(dataIn.readShort());
} catch (EOFException e) {
break;
} catch (IOException e) {
break;
}
}
dataOut.close();
}
}
}
}
| private String transferWSDL(String usernameAndPassword) throws WiseConnectionException {
String filePath = null;
try {
URL endpoint = new URL(wsdlURL);
HttpURLConnection conn = (HttpURLConnection) endpoint.openConnection();
conn.setDoOutput(false);
conn.setDoInput(true);
conn.setUseCaches(false);
conn.setRequestMethod("GET");
conn.setRequestProperty("Accept", "text/xml,application/xml,application/xhtml+xml,text/html;q=0.9,text/plain;q=0.8,image/png,*/*;q=0.5");
conn.setRequestProperty("Connection", "close");
if (this.password != null) {
conn.setRequestProperty("Authorization", "Basic " + (new BASE64Encoder()).encode(usernameAndPassword.getBytes()));
}
InputStream is = null;
if (conn.getResponseCode() == 200) {
is = conn.getInputStream();
} else {
is = conn.getErrorStream();
InputStreamReader isr = new InputStreamReader(is);
StringWriter sw = new StringWriter();
char[] buf = new char[200];
int read = 0;
while (read != -1) {
read = isr.read(buf);
sw.write(buf);
}
throw new WiseConnectionException("Remote server's response is an error: " + sw.toString());
}
File file = new File(tmpDir, new StringBuffer("Wise").append(IDGenerator.nextVal()).append(".xml").toString());
OutputStream fos = new BufferedOutputStream(new FileOutputStream(file));
IOUtils.copyStream(fos, is);
fos.close();
is.close();
filePath = file.getPath();
} catch (WiseConnectionException wce) {
throw wce;
} catch (Exception e) {
logger.error("Failed to download wsdl from URL : " + wsdlURL);
throw new WiseConnectionException("Wsdl download failed!", e);
}
return filePath;
}
| true |
33 | 13,569,337 | 11,394,767 | public static String getMD5HashFromString(String message) {
String hashword = null;
try {
MessageDigest md5 = MessageDigest.getInstance("MD5");
md5.update(message.getBytes());
BigInteger hash = new BigInteger(1, md5.digest());
hashword = hash.toString(16);
} catch (NoSuchAlgorithmException nsae) {
}
return hashword;
}
| public static byte[] gerarHash(String frase) {
try {
MessageDigest md = MessageDigest.getInstance("SHA-1");
md.update(frase.getBytes());
return md.digest();
} catch (NoSuchAlgorithmException e) {
return null;
}
}
| true |
34 | 254,039 | 16,016,623 | protected void doDownload(S3Bucket bucket, S3Object s3object) throws Exception {
String key = s3object.getKey();
key = trimPrefix(key);
String[] path = key.split("/");
String fileName = path[path.length - 1];
String dirPath = "";
for (int i = 0; i < path.length - 1; i++) {
dirPath += path[i] + "/";
}
File outputDir = new File(downloadFileOutputDir + "/" + dirPath);
if (outputDir.exists() == false) {
outputDir.mkdirs();
}
File outputFile = new File(outputDir, fileName);
long size = s3object.getContentLength();
if (outputFile.exists() && outputFile.length() == size) {
return;
}
long startTime = System.currentTimeMillis();
log.info("Download start.S3 file=" + s3object.getKey() + " local file=" + outputFile.getAbsolutePath());
FileOutputStream fout = null;
S3Object dataObject = null;
try {
fout = new FileOutputStream(outputFile);
dataObject = s3.getObject(bucket, s3object.getKey());
InputStream is = dataObject.getDataInputStream();
IOUtils.copyStream(is, fout);
downloadedFileList.add(key);
long downloadTime = System.currentTimeMillis() - startTime;
log.info("Download complete.Estimete time=" + downloadTime + "ms " + IOUtils.toBPSText(downloadTime, size));
} catch (Exception e) {
log.error("Download fail. s3 file=" + key, e);
outputFile.delete();
throw e;
} finally {
IOUtils.closeNoException(fout);
if (dataObject != null) {
dataObject.closeDataInputStream();
}
}
}
| @Override
protected ModelAndView handleRequestInternal(final HttpServletRequest request, final HttpServletResponse response) throws Exception {
final String filename = ServletRequestUtils.getRequiredStringParameter(request, "id");
final File file = new File(path, filename + ".html");
logger.debug("Getting static content from: " + file.getPath());
final InputStream is = getServletContext().getResourceAsStream(file.getPath());
OutputStream out = null;
if (is != null) {
try {
out = response.getOutputStream();
IOUtils.copy(is, out);
} catch (IOException ioex) {
logger.error(ioex);
} finally {
is.close();
if (out != null) {
out.close();
}
}
}
return null;
}
| true |
35 | 4,147,990 | 1,663,419 | public static void copyFile(File dst, File src, boolean append) throws FileNotFoundException, IOException {
dst.createNewFile();
FileChannel in = new FileInputStream(src).getChannel();
FileChannel out = new FileOutputStream(dst).getChannel();
long startAt = 0;
if (append) startAt = out.size();
in.transferTo(startAt, in.size(), out);
out.close();
in.close();
}
| private static void copyFile(File in, File out) throws IOException {
FileChannel inChannel = new FileInputStream(in).getChannel();
FileChannel outChannel = new FileOutputStream(out).getChannel();
try {
inChannel.transferTo(0, inChannel.size(), outChannel);
} catch (IOException e) {
throw e;
} finally {
if (inChannel != null) inChannel.close();
if (outChannel != null) outChannel.close();
}
}
| true |
36 | 16,603,670 | 12,576,210 | private String generateUniqueIdMD5(String workgroupIdString, String runIdString) {
String passwordUnhashed = workgroupIdString + "-" + runIdString;
MessageDigest m = null;
try {
m = MessageDigest.getInstance("MD5");
} catch (NoSuchAlgorithmException e) {
e.printStackTrace();
}
m.update(passwordUnhashed.getBytes(), 0, passwordUnhashed.length());
String uniqueIdMD5 = new BigInteger(1, m.digest()).toString(16);
return uniqueIdMD5;
}
| public static FTPClient createConnection(String hostname, int port, char[] username, char[] password, String workingDirectory, FileSystemOptions fileSystemOptions) throws FileSystemException {
if (username == null) username = "anonymous".toCharArray();
if (password == null) password = "anonymous".toCharArray();
try {
final FTPClient client = new FTPClient();
String key = FtpFileSystemConfigBuilder.getInstance().getEntryParser(fileSystemOptions);
if (key != null) {
FTPClientConfig config = new FTPClientConfig(key);
String serverLanguageCode = FtpFileSystemConfigBuilder.getInstance().getServerLanguageCode(fileSystemOptions);
if (serverLanguageCode != null) config.setServerLanguageCode(serverLanguageCode);
String defaultDateFormat = FtpFileSystemConfigBuilder.getInstance().getDefaultDateFormat(fileSystemOptions);
if (defaultDateFormat != null) config.setDefaultDateFormatStr(defaultDateFormat);
String recentDateFormat = FtpFileSystemConfigBuilder.getInstance().getRecentDateFormat(fileSystemOptions);
if (recentDateFormat != null) config.setRecentDateFormatStr(recentDateFormat);
String serverTimeZoneId = FtpFileSystemConfigBuilder.getInstance().getServerTimeZoneId(fileSystemOptions);
if (serverTimeZoneId != null) config.setServerTimeZoneId(serverTimeZoneId);
String[] shortMonthNames = FtpFileSystemConfigBuilder.getInstance().getShortMonthNames(fileSystemOptions);
if (shortMonthNames != null) {
StringBuffer shortMonthNamesStr = new StringBuffer(40);
for (int i = 0; i < shortMonthNames.length; i++) {
if (shortMonthNamesStr.length() > 0) shortMonthNamesStr.append("|");
shortMonthNamesStr.append(shortMonthNames[i]);
}
config.setShortMonthNames(shortMonthNamesStr.toString());
}
client.configure(config);
}
FTPFileEntryParserFactory myFactory = FtpFileSystemConfigBuilder.getInstance().getEntryParserFactory(fileSystemOptions);
if (myFactory != null) client.setParserFactory(myFactory);
try {
client.connect(hostname, port);
int reply = client.getReplyCode();
if (!FTPReply.isPositiveCompletion(reply)) throw new FileSystemException("vfs.provider.ftp/connect-rejected.error", hostname);
if (!client.login(UserAuthenticatorUtils.toString(username), UserAuthenticatorUtils.toString(password))) throw new FileSystemException("vfs.provider.ftp/login.error", new Object[] { hostname, UserAuthenticatorUtils.toString(username) }, null);
if (!client.setFileType(FTP.BINARY_FILE_TYPE)) throw new FileSystemException("vfs.provider.ftp/set-binary.error", hostname);
Integer dataTimeout = FtpFileSystemConfigBuilder.getInstance().getDataTimeout(fileSystemOptions);
if (dataTimeout != null) client.setDataTimeout(dataTimeout.intValue());
try {
FtpFileSystemConfigBuilder.getInstance().setHomeDir(fileSystemOptions, client.printWorkingDirectory());
} catch (IOException ex) {
throw new FileSystemException("Error obtaining working directory!");
}
Boolean userDirIsRoot = FtpFileSystemConfigBuilder.getInstance().getUserDirIsRoot(fileSystemOptions);
if (workingDirectory != null && (userDirIsRoot == null || !userDirIsRoot.booleanValue())) if (!client.changeWorkingDirectory(workingDirectory)) throw new FileSystemException("vfs.provider.ftp/change-work-directory.error", workingDirectory);
Boolean passiveMode = FtpFileSystemConfigBuilder.getInstance().getPassiveMode(fileSystemOptions);
if (passiveMode != null && passiveMode.booleanValue()) client.enterLocalPassiveMode();
} catch (final IOException e) {
if (client.isConnected()) client.disconnect();
throw e;
}
return client;
} catch (final Exception exc) {
throw new FileSystemException("vfs.provider.ftp/connect.error", new Object[] { hostname }, exc);
}
}
| false |
37 | 19,825,038 | 9,385,633 | public static byte[] post(String path, Map<String, String> params, String encode) throws Exception {
StringBuilder parambuilder = new StringBuilder("");
if (params != null && !params.isEmpty()) {
for (Map.Entry<String, String> entry : params.entrySet()) {
parambuilder.append(entry.getKey()).append("=").append(URLEncoder.encode(entry.getValue(), encode)).append("&");
}
parambuilder.deleteCharAt(parambuilder.length() - 1);
}
byte[] data = parambuilder.toString().getBytes();
URL url = new URL(path);
HttpURLConnection conn = (HttpURLConnection) url.openConnection();
conn.setDoOutput(true);
conn.setUseCaches(false);
conn.setConnectTimeout(5 * 1000);
conn.setRequestMethod("POST");
conn.setRequestProperty("Accept", "image/gif, image/jpeg, image/pjpeg, image/pjpeg, application/x-shockwave-flash, application/xaml+xml, application/vnd.ms-xpsdocument, application/x-ms-xbap, application/x-ms-application, application/vnd.ms-excel, application/vnd.ms-powerpoint, application/msword, */*");
conn.setRequestProperty("Accept-Language", "zh-CN");
conn.setRequestProperty("User-Agent", "Mozilla/4.0 (compatible; MSIE 8.0; Windows NT 5.2; Trident/4.0; .NET CLR 1.1.4322; .NET CLR 2.0.50727; .NET CLR 3.0.04506.30; .NET CLR 3.0.4506.2152; .NET CLR 3.5.30729)");
conn.setRequestProperty("Content-Type", "application/x-www-form-urlencoded");
conn.setRequestProperty("Content-Length", String.valueOf(data.length));
conn.setRequestProperty("Connection", "Keep-Alive");
DataOutputStream outStream = new DataOutputStream(conn.getOutputStream());
outStream.write(data);
outStream.flush();
outStream.close();
if (conn.getResponseCode() == 200) {
return StreamTool.readInputStream(conn.getInputStream());
}
return null;
}
| protected void setRankOrder() {
this.rankOrder = new int[values.length];
for (int i = 0; i < rankOrder.length; i++) {
rankOrder[i] = i;
assert (!Double.isNaN(values[i]));
}
for (int i = rankOrder.length - 1; i >= 0; i--) {
boolean swapped = false;
for (int j = 0; j < i; j++) if (values[rankOrder[j]] < values[rankOrder[j + 1]]) {
int r = rankOrder[j];
rankOrder[j] = rankOrder[j + 1];
rankOrder[j + 1] = r;
}
}
}
| false |
38 | 810,724 | 22,207,815 | private static void readAndRewrite(File inFile, File outFile) throws IOException {
ImageInputStream iis = ImageIO.createImageInputStream(new BufferedInputStream(new FileInputStream(inFile)));
DcmParser dcmParser = DcmParserFactory.getInstance().newDcmParser(iis);
Dataset ds = DcmObjectFactory.getInstance().newDataset();
dcmParser.setDcmHandler(ds.getDcmHandler());
dcmParser.parseDcmFile(null, Tags.PixelData);
PixelDataReader pdReader = pdFact.newReader(ds, iis, dcmParser.getDcmDecodeParam().byteOrder, dcmParser.getReadVR());
System.out.println("reading " + inFile + "...");
pdReader.readPixelData(false);
ImageOutputStream out = ImageIO.createImageOutputStream(new BufferedOutputStream(new FileOutputStream(outFile)));
DcmEncodeParam dcmEncParam = DcmEncodeParam.IVR_LE;
ds.writeDataset(out, dcmEncParam);
ds.writeHeader(out, dcmEncParam, Tags.PixelData, dcmParser.getReadVR(), dcmParser.getReadLength());
System.out.println("writing " + outFile + "...");
PixelDataWriter pdWriter = pdFact.newWriter(pdReader.getPixelDataArray(), false, ds, out, dcmParser.getDcmDecodeParam().byteOrder, dcmParser.getReadVR());
pdWriter.writePixelData();
out.flush();
out.close();
System.out.println("done!");
}
| public static Checksum checksum(File file, Checksum checksum) throws IOException {
if (file.isDirectory()) {
throw new IllegalArgumentException("Checksums can't be computed on directories");
}
InputStream in = null;
try {
in = new CheckedInputStream(new FileInputStream(file), checksum);
IOUtils.copy(in, new NullOutputStream());
} finally {
IOUtils.closeQuietly(in);
}
return checksum;
}
| true |
39 | 1,643,091 | 23,277,837 | private static void download(String urlString) throws IOException {
URL url = new URL(urlString);
url = handleRedirectUrl(url);
URLConnection cn = url.openConnection();
Utils.setHeader(cn);
long fileLength = cn.getContentLength();
Statics.getInstance().setFileLength(fileLength);
long packageLength = fileLength / THREAD_COUNT;
long leftLength = fileLength % THREAD_COUNT;
String fileName = Utils.decodeURLFileName(url);
RandomAccessFile file = new RandomAccessFile(fileName, "rw");
System.out.println("File: " + fileName + ", Size: " + Utils.calSize(fileLength));
CountDownLatch latch = new CountDownLatch(THREAD_COUNT + 1);
long pos = 0;
for (int i = 0; i < THREAD_COUNT; i++) {
long endPos = pos + packageLength;
if (leftLength > 0) {
endPos++;
leftLength--;
}
new Thread(new DownloadThread(latch, url, file, pos, endPos)).start();
pos = endPos;
}
new Thread(new MoniterThread(latch)).start();
try {
latch.await();
} catch (InterruptedException e) {
e.printStackTrace();
}
}
| private File download(String filename, URL url) {
int size = -1;
int received = 0;
try {
fireDownloadStarted(filename);
File file = createFile(filename);
BufferedOutputStream bos = new BufferedOutputStream(new FileOutputStream(file));
System.out.println("下载资源：" + filename + ", url=" + url);
// BufferedInputStream bis = new
// BufferedInputStream(url.openStream());
InputStream bis = url.openStream();
byte[] buf = new byte[1024];
int count = 0;
long lastUpdate = 0;
size = bis.available();
while ((count = bis.read(buf)) != -1) {
bos.write(buf, 0, count);
received += count;
long now = System.currentTimeMillis();
if (now - lastUpdate > 500) {
fireDownloadUpdate(filename, size, received);
lastUpdate = now;
}
}
bos.close();
System.out.println("资源下载完毕：" + filename);
fireDownloadCompleted(filename);
return file;
} catch (IOException e) {
System.out.println("下载资源失败：" + filename + ", error=" + e.getMessage());
fireDownloadInterrupted(filename);
if (!(e instanceof FileNotFoundException)) {
e.printStackTrace();
}
}
return null;
}
| false |
40 | 1,214,975 | 21,172,450 | public static void writeToFile(InputStream input, File file, ProgressListener listener, long length) {
OutputStream output = null;
try {
output = new CountingOutputStream(new FileOutputStream(file), listener, length);
IOUtils.copy(input, output);
} catch (IOException e) {
throw new RuntimeException(e);
} finally {
IOUtils.closeQuietly(input);
IOUtils.closeQuietly(output);
}
}
| public static void unzip2(String strZipFile, String folder) throws IOException, ArchiveException {
FileUtil.fileExists(strZipFile, true);
final InputStream is = new FileInputStream(strZipFile);
ArchiveInputStream in = new ArchiveStreamFactory().createArchiveInputStream("zip", is);
ZipArchiveEntry entry = null;
OutputStream out = null;
while ((entry = (ZipArchiveEntry) in.getNextEntry()) != null) {
File zipPath = new File(folder);
File destinationFilePath = new File(zipPath, entry.getName());
destinationFilePath.getParentFile().mkdirs();
if (entry.isDirectory()) {
continue;
} else {
out = new FileOutputStream(new File(folder, entry.getName()));
IOUtils.copy(in, out);
out.close();
}
}
in.close();
}
| true |
41 | 9,070,085 | 17,832,320 | public String getMd5CodeOf16(String str) {
StringBuffer buf = null;
try {
MessageDigest md = MessageDigest.getInstance("MD5");
md.update(str.getBytes());
byte b[] = md.digest();
int i;
buf = new StringBuffer("");
for (int offset = 0; offset < b.length; offset++) {
i = b[offset];
if (i < 0) i += 256;
if (i < 16) buf.append("0");
buf.append(Integer.toHexString(i));
}
} catch (NoSuchAlgorithmException e) {
e.printStackTrace();
} finally {
return buf.toString().substring(8, 24);
}
}
| public void run() {
Pair p = null;
try {
while ((p = queue.pop()) != null) {
GetMethod get = new GetMethod(p.getRemoteUri());
try {
get.setFollowRedirects(true);
get.setRequestHeader("Mariner-Application", "prerenderer");
get.setRequestHeader("Mariner-DeviceName", deviceName);
int iGetResultCode = httpClient.executeMethod(get);
if (iGetResultCode != 200) {
throw new IOException("Got response code " + iGetResultCode + " for a request for " + p.getRemoteUri());
}
InputStream is = get.getResponseBodyAsStream();
File localFile = new File(deviceFile, p.getLocalUri());
localFile.getParentFile().mkdirs();
OutputStream os = new FileOutputStream(localFile);
IOUtils.copy(is, os);
os.close();
} finally {
get.releaseConnection();
}
}
} catch (Exception ex) {
result = ex;
}
}
| false |
42 | 10,445,018 | 19,295,210 | public String MD5(String text) throws NoSuchAlgorithmException, UnsupportedEncodingException {
MessageDigest md;
md = MessageDigest.getInstance("MD5");
byte[] md5hash = new byte[32];
md.update(text.getBytes("iso-8859-1"), 0, text.length());
md5hash = md.digest();
return convertToHex(md5hash);
}
| public static String generateHash(String value) {
MessageDigest md5 = null;
try {
md5 = MessageDigest.getInstance("MD5");
md5.reset();
md5.update(value.getBytes());
} catch (NoSuchAlgorithmException e) {
log.error("Could not find the requested hash method: " + e.getMessage());
}
byte[] result = md5.digest();
StringBuffer hexString = new StringBuffer();
for (int i = 0; i < result.length; i++) {
hexString.append(Integer.toHexString(0xFF & result[i]));
}
return hexString.toString();
}
| true |
43 | 6,988,217 | 701,471 | public void testQueryForBinary() throws InvalidNodeTypeDefException, ParseException, Exception {
JCRNodeSource source = (JCRNodeSource) resolveSource(BASE_URL + "images/photo.png");
assertNotNull(source);
assertEquals(false, source.exists());
OutputStream os = source.getOutputStream();
assertNotNull(os);
String content = "foo is a bar";
os.write(content.getBytes());
os.flush();
os.close();
QueryResultSource qResult = (QueryResultSource) resolveSource(BASE_URL + "images?/*[contains(local-name(), 'photo.png')]");
assertNotNull(qResult);
Collection results = qResult.getChildren();
assertEquals(1, results.size());
Iterator it = results.iterator();
JCRNodeSource rSrc = (JCRNodeSource) it.next();
InputStream rSrcIn = rSrc.getInputStream();
ByteArrayOutputStream actualOut = new ByteArrayOutputStream();
IOUtils.copy(rSrcIn, actualOut);
rSrcIn.close();
assertEquals(content, actualOut.toString());
actualOut.close();
rSrc.delete();
}
| private boolean enregistreToi() {
PrintWriter lEcrivain;
String laDest = "./img_types/" + sonImage;
if (!new File("./img_types").exists()) {
new File("./img_types").mkdirs();
}
try {
FileChannel leFicSource = new FileInputStream(sonFichier).getChannel();
FileChannel leFicDest = new FileOutputStream(laDest).getChannel();
leFicSource.transferTo(0, leFicSource.size(), leFicDest);
leFicSource.close();
leFicDest.close();
lEcrivain = new PrintWriter(new FileWriter(new File("bundll/types.jay"), true));
lEcrivain.println(sonNom);
lEcrivain.println(sonImage);
if (sonOptionRadio1.isSelected()) {
lEcrivain.println("0:?");
}
if (sonOptionRadio2.isSelected()) {
lEcrivain.println("1:" + JOptionPane.showInputDialog(null, "Vous avez choisis de rendre ce terrain difficile � franchir.\nVeuillez en indiquer la raison.", "Demande de pr�cision", JOptionPane.INFORMATION_MESSAGE));
}
if (sonOptionRadio3.isSelected()) {
lEcrivain.println("2:?");
}
lEcrivain.close();
return true;
} catch (Exception lException) {
return false;
}
}
| true |
44 | 4,855,600 | 12,853,333 | public void schema(final Row row, TestResults testResults) throws Exception {
String urlString = row.text(1);
String schemaBase = null;
if (row.cellExists(2)) {
schemaBase = row.text(2);
}
try {
StreamSource schemaSource;
if (urlString.startsWith(CLASS_PREFIX)) {
InputStream schema = XmlValidator.class.getClassLoader().getResourceAsStream(urlString.substring(CLASS_PREFIX.length()));
schemaSource = new StreamSource(schema);
} else {
URL url = new URL(urlString);
URLConnection urlConnection = url.openConnection();
urlConnection.connect();
InputStream inputStream = urlConnection.getInputStream();
schemaSource = new StreamSource(inputStream);
}
SchemaFactory factory = SchemaFactory.newInstance(XMLConstants.W3C_XML_SCHEMA_NS_URI);
if (schemaBase != null) {
DefaultLSResourceResolver resolver = new DefaultLSResourceResolver(schemaBase);
factory.setResourceResolver(resolver);
}
factory.newSchema(new URL(urlString));
Validator validator = factory.newSchema(schemaSource).newValidator();
StreamSource source = new StreamSource(new StringReader(xml));
validator.validate(source);
row.pass(testResults);
} catch (SAXException e) {
Loggers.SERVICE_LOG.warn("schema error", e);
throw new FitFailureException(e.getMessage());
} catch (IOException e) {
Loggers.SERVICE_LOG.warn("schema error", e);
throw new FitFailureException(e.getMessage());
}
}
| public static String getURLContent(String href) throws BuildException {
URL url = null;
String content;
try {
URL context = new URL("file:" + System.getProperty("user.dir") + "/");
url = new URL(context, href);
InputStream is = url.openStream();
InputStreamReader isr = new InputStreamReader(is);
StringBuffer stringBuffer = new StringBuffer();
char[] buffer = new char[1024];
int len;
while ((len = isr.read(buffer, 0, 1024)) > 0) stringBuffer.append(buffer, 0, len);
content = stringBuffer.toString();
isr.close();
} catch (Exception ex) {
throw new BuildException("Cannot get content of URL " + href + ": " + ex);
}
return content;
}
| false |
45 | 1,989,226 | 11,961,013 | public void actualizar() throws SQLException, ClassNotFoundException, Exception {
Connection conn = null;
PreparedStatement ms = null;
registroActualizado = false;
try {
conn = ToolsBD.getConn();
conn.setAutoCommit(false);
Date fechaSystem = new Date();
DateFormat aaaammdd = new SimpleDateFormat("yyyyMMdd");
int fzafsis = Integer.parseInt(aaaammdd.format(fechaSystem));
DateFormat hhmmss = new SimpleDateFormat("HHmmss");
DateFormat sss = new SimpleDateFormat("S");
String ss = sss.format(fechaSystem);
if (ss.length() > 2) {
ss = ss.substring(0, 2);
}
int fzahsis = Integer.parseInt(hhmmss.format(fechaSystem) + ss);
ms = conn.prepareStatement(SENTENCIA_UPDATE);
if (fechaOficio != null && !fechaOficio.equals("")) {
if (fechaOficio.matches("\\d{8}")) {
ms.setInt(1, Integer.parseInt(fechaOficio));
} else {
int fzafent = 0;
try {
fechaTest = dateF.parse(fechaOficio);
Calendar cal = Calendar.getInstance();
cal.setTime(fechaTest);
DateFormat date1 = new SimpleDateFormat("yyyyMMdd");
fzafent = Integer.parseInt(date1.format(fechaTest));
} catch (Exception e) {
}
ms.setInt(1, fzafent);
}
} else {
ms.setInt(1, 0);
}
ms.setString(2, descripcion);
ms.setInt(3, Integer.parseInt(anoSalida));
ms.setInt(4, Integer.parseInt(oficinaSalida));
ms.setInt(5, Integer.parseInt(numeroSalida));
ms.setString(6, nulo);
ms.setString(7, motivosNulo);
ms.setString(8, usuarioNulo);
if (fechaNulo != null && !fechaNulo.equals("")) {
int fzafent = 0;
try {
fechaTest = dateF.parse(fechaNulo);
Calendar cal = Calendar.getInstance();
cal.setTime(fechaTest);
DateFormat date1 = new SimpleDateFormat("yyyyMMdd");
fzafent = Integer.parseInt(date1.format(fechaTest));
} catch (Exception e) {
}
ms.setInt(9, fzafent);
} else {
ms.setInt(9, 0);
}
if (fechaEntrada != null && !fechaEntrada.equals("")) {
int fzafent = 0;
try {
fechaTest = dateF.parse(fechaEntrada);
Calendar cal = Calendar.getInstance();
cal.setTime(fechaTest);
DateFormat date1 = new SimpleDateFormat("yyyyMMdd");
fzafent = Integer.parseInt(date1.format(fechaTest));
} catch (Exception e) {
}
ms.setInt(10, fzafent);
} else {
ms.setInt(10, 0);
}
ms.setString(11, descartadoEntrada);
ms.setString(12, usuarioEntrada);
ms.setString(13, motivosDescarteEntrada);
ms.setInt(14, anoEntrada != null ? Integer.parseInt(anoEntrada) : 0);
ms.setInt(15, oficinaEntrada != null ? Integer.parseInt(oficinaEntrada) : 0);
ms.setInt(16, numeroEntrada != null ? Integer.parseInt(numeroEntrada) : 0);
ms.setInt(17, anoOficio != null ? Integer.parseInt(anoOficio) : 0);
ms.setInt(18, oficinaOficio != null ? Integer.parseInt(oficinaOficio) : 0);
ms.setInt(19, numeroOficio != null ? Integer.parseInt(numeroOficio) : 0);
int afectados = ms.executeUpdate();
if (afectados > 0) {
registroActualizado = true;
} else {
registroActualizado = false;
}
conn.commit();
} catch (Exception ex) {
System.out.println("Error inesperat, no s'ha desat el registre: " + ex.getMessage());
ex.printStackTrace();
registroActualizado = false;
errores.put("", "Error inesperat, no s'ha desat el registre" + ": " + ex.getClass() + "->" + ex.getMessage());
try {
if (conn != null) conn.rollback();
} catch (SQLException sqle) {
throw new RemoteException("S'ha produït un error i no s'han pogut tornar enrere els canvis efectuats", sqle);
}
throw new RemoteException("Error inesperat, no s'ha actualitzat la taula de gestió dels ofici de remissió.", ex);
} finally {
ToolsBD.closeConn(conn, ms, null);
}
}
| public static Builder fromURL(URL url) {
try {
InputStream in = null;
try {
in = url.openStream();
ByteArrayOutputStream baos = new ByteArrayOutputStream();
int read = -1;
byte[] buf = new byte[4096];
while ((read = in.read(buf)) >= 0) {
if (read > 0) {
baos.write(buf, 0, read);
}
}
StreamBuilder b = (StreamBuilder) fromMemory(baos.toByteArray());
try {
b.setSystemId(url.toURI().toString());
} catch (URISyntaxException use) {
b.setSystemId(url.toString());
}
return b;
} finally {
if (in != null) {
in.close();
}
}
} catch (IOException ex) {
throw new XMLUnitException(ex);
}
}
| false |
46 | 15,596,950 | 14,782,656 | private static ImageIcon tryLoadImageIconFromResource(String filename, String path, int width, int height) {
ImageIcon icon = null;
try {
URL url = cl.getResource(path + pathSeparator + fixFilename(filename));
if (url != null && url.openStream() != null) {
icon = new ImageIcon(url);
}
} catch (Exception e) {
}
if (icon == null) {
return null;
}
if ((icon.getIconWidth() == width) && (icon.getIconHeight() == height)) {
return icon;
} else {
return new ImageIcon(icon.getImage().getScaledInstance(width, height, java.awt.Image.SCALE_SMOOTH));
}
}
| private static Long statusSWGCraftTime() {
long current = System.currentTimeMillis() / 1000L;
if (current < (previousStatusCheck + SWGCraft.STATUS_CHECK_DELAY)) return previousStatusTime;
URL url = null;
try {
synchronized (previousStatusTime) {
if (current >= previousStatusCheck + SWGCraft.STATUS_CHECK_DELAY) {
url = SWGCraft.getStatusTextURL();
String statusTime = ZReader.read(url.openStream());
previousStatusTime = Long.valueOf(statusTime);
previousStatusCheck = current;
}
return previousStatusTime;
}
} catch (UnknownHostException e) {
SWGCraft.showUnknownHostDialog(url, e);
} catch (Throwable e) {
SWGAide.printDebug("cmgr", 1, "SWGResourceManager:statusSWGCraftTime:", e.toString());
}
return Long.valueOf(0);
}
| false |
47 | 249,428 | 6,166,363 | public boolean onStart() {
log("Starting up, this may take a minute...");
gui = new ApeAtollGUI();
gui.setVisible(true);
while (waitGUI) {
sleep(100);
}
URLConnection url = null;
BufferedReader in = null;
BufferedWriter out = null;
if (checkUpdates) {
try {
url = new URL("http://www.voltrex.be/rsbot/VoltrexApeAtollVERSION.txt").openConnection();
in = new BufferedReader(new InputStreamReader(url.getInputStream()));
if (Double.parseDouble(in.readLine()) > properties.version()) {
if (JOptionPane.showConfirmDialog(null, "Update found. Do you want to update?") == 0) {
JOptionPane.showMessageDialog(null, "Please choose 'VoltrexApeAtoll.java' in your scripts/sources folder.");
JFileChooser fc = new JFileChooser();
if (fc.showOpenDialog(null) == JFileChooser.APPROVE_OPTION) {
url = new URL("http://www.voltrex.be/rsbot/VoltrexApeAtoll.java").openConnection();
in = new BufferedReader(new InputStreamReader(url.getInputStream()));
out = new BufferedWriter(new FileWriter(fc.getSelectedFile().getPath()));
String inp;
while ((inp = in.readLine()) != null) {
out.write(inp);
out.newLine();
out.flush();
}
log("Script successfully downloaded. Please recompile.");
return false;
} else log("Update canceled");
} else log("Update canceled");
} else log("You have the latest version.");
if (in != null) in.close();
if (out != null) out.close();
} catch (IOException e) {
log("Problem getting version. Please report this bug!");
}
}
try {
BKG = ImageIO.read(new URL("http://i54.tinypic.com/2egcfaw.jpg"));
} catch (final java.io.IOException e) {
e.printStackTrace();
}
try {
final URL cursorURL = new URL("http://imgur.com/i7nMG.png");
final URL cursor80URL = new URL("http://imgur.com/8k9op.png");
normal = ImageIO.read(cursorURL);
clicked = ImageIO.read(cursor80URL);
} catch (MalformedURLException e) {
log.info("Unable to buffer cursor.");
} catch (IOException e) {
log.info("Unable to open cursor image.");
}
scriptStartTime = System.currentTimeMillis();
mouse.setSpeed(MouseSpeed);
camera.setPitch(true);
log("You are using Voltrex Ape Atoll agility course.");
return true;
}
| private static byte[] gerarHash(String frase) {
try {
MessageDigest md = MessageDigest.getInstance("MD5");
md.update(frase.getBytes());
return md.digest();
} catch (Exception e) {
return null;
}
}
| false |
48 | 6,751,999 | 18,761,618 | public static void main(String[] args) throws Exception {
TripleDES tdes = new TripleDES();
StreamBlockReader reader = new StreamBlockReader(new FileInputStream("D:\\test.txt"));
StreamBlockWriter writer = new StreamBlockWriter(new FileOutputStream("D:\\testTDESENC.txt"));
SingleKey key = new SingleKey(new Block(128), "");
key = new SingleKey(new Block("01011101110000101001100111001011101000001110111101001001101101101101100000011101100100110000101100001110000001111101001101001101"), "");
Mode mode = new ECBTripleDESMode(tdes);
tdes.encrypt(reader, writer, key, mode);
}
| private FileInputStream getPackageStream(String archivePath) throws IOException, PackageManagerException {
final int lastSlashInName = filename.lastIndexOf("/");
final String newFileName = filename.substring(lastSlashInName);
File packageFile = new File((new StringBuilder()).append(archivePath).append(newFileName).toString());
if (null != packageFile) return new FileInputStream(packageFile);
if (null != packageURL) {
final InputStream urlStream = new ConnectToServer(null).getInputStream(packageURL);
packageFile = new File((new StringBuilder()).append(getName()).append(".deb").toString());
final OutputStream fileStream = new FileOutputStream(packageFile);
final byte buffer[] = new byte[10240];
for (int read = 0; (read = urlStream.read(buffer)) > 0; ) fileStream.write(buffer, 0, read);
urlStream.close();
fileStream.close();
return new FileInputStream(packageFile);
} else {
final String errorMessage = PreferenceStoreHolder.getPreferenceStoreByName("Screen").getPreferenceAsString("package.getPackageStream.packageURLIsNull", "No entry found for package.getPackageStream.packageURLIsNull");
if (pm != null) {
pm.addWarning(errorMessage);
logger.error(errorMessage);
} else logger.error(errorMessage);
throw new FileNotFoundException();
}
}
| true |
49 | 19,193,813 | 18,568,751 | public void writeTo(File f) throws IOException {
if (state != STATE_OK) throw new IllegalStateException("Upload failed");
if (tempLocation == null) throw new IllegalStateException("File already saved");
if (f.isDirectory()) f = new File(f, filename);
FileInputStream fis = new FileInputStream(tempLocation);
FileOutputStream fos = new FileOutputStream(f);
byte[] buf = new byte[BUFFER_SIZE];
try {
int i = 0;
while ((i = fis.read(buf)) != -1) fos.write(buf, 0, i);
} finally {
deleteTemporaryFile();
fis.close();
fos.close();
}
}
| public static Boolean decompress(File source, File destination) {
FileOutputStream outputStream;
ZipInputStream inputStream;
try {
outputStream = null;
inputStream = new ZipInputStream(new FileInputStream(source));
int read;
byte buffer[] = new byte[BUFFER_SIZE];
ZipEntry zipEntry;
while ((zipEntry = inputStream.getNextEntry()) != null) {
if (zipEntry.isDirectory()) new File(destination, zipEntry.getName()).mkdirs(); else {
File fileEntry = new File(destination, zipEntry.getName());
fileEntry.getParentFile().mkdirs();
outputStream = new FileOutputStream(fileEntry);
while ((read = inputStream.read(buffer, 0, BUFFER_SIZE)) != -1) {
outputStream.write(buffer, 0, read);
}
outputStream.flush();
outputStream.close();
}
}
inputStream.close();
} catch (Exception oException) {
return false;
}
return true;
}
| true |
50 | 418,257 | 21,900,384 | public BufferedWriter createOutputStream(String inFile, String outFile) throws IOException {
int k_blockSize = 1024;
int byteCount;
char[] buf = new char[k_blockSize];
File ofp = new File(outFile);
ZipOutputStream zos = new ZipOutputStream(new FileOutputStream(ofp));
zos.setMethod(ZipOutputStream.DEFLATED);
OutputStreamWriter osw = new OutputStreamWriter(zos, "ISO-8859-1");
BufferedWriter bw = new BufferedWriter(osw);
ZipEntry zot = null;
File ifp = new File(inFile);
ZipInputStream zis = new ZipInputStream(new FileInputStream(ifp));
InputStreamReader isr = new InputStreamReader(zis, "ISO-8859-1");
BufferedReader br = new BufferedReader(isr);
ZipEntry zit = null;
while ((zit = zis.getNextEntry()) != null) {
if (zit.getName().equals("content.xml")) {
continue;
}
zot = new ZipEntry(zit.getName());
zos.putNextEntry(zot);
while ((byteCount = br.read(buf, 0, k_blockSize)) >= 0) bw.write(buf, 0, byteCount);
bw.flush();
zos.closeEntry();
}
zos.putNextEntry(new ZipEntry("content.xml"));
bw.flush();
osw = new OutputStreamWriter(zos, "UTF8");
bw = new BufferedWriter(osw);
return bw;
}
| @Override
protected ActionForward executeAction(ActionMapping mapping, ActionForm form, User user, HttpServletRequest request, HttpServletResponse response) throws Exception {
long resourceId = ServletRequestUtils.getLongParameter(request, "resourceId", 0L);
String attributeIdentifier = request.getParameter("identifier");
if (resourceId != 0L && StringUtils.hasText(attributeIdentifier)) {
try {
BinaryAttribute binaryAttribute = resourceManager.readAttribute(resourceId, attributeIdentifier, user);
response.addHeader("Content-Disposition", "attachment; filename=\"" + binaryAttribute.getName() + '"');
String contentType = binaryAttribute.getContentType();
if (contentType != null) {
if ("application/x-zip-compressed".equalsIgnoreCase(contentType)) {
response.setContentType("application/octet-stream");
} else {
response.setContentType(contentType);
}
} else {
response.setContentType("application/octet-stream");
}
IOUtils.copy(binaryAttribute.getInputStream(), response.getOutputStream());
return null;
} catch (DataRetrievalFailureException e) {
addGlobalError(request, "errors.notFound");
} catch (Exception e) {
addGlobalError(request, e);
}
}
return mapping.getInputForward();
}
| true |
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Dataset Card for "code_x_glue_cc_clone_detection_big_clone_bench"
Dataset Summary
CodeXGLUE Clone-detection-BigCloneBench dataset, available at https://github.com/microsoft/CodeXGLUE/tree/main/Code-Code/Clone-detection-BigCloneBench
Given two codes as the input, the task is to do binary classification (0/1), where 1 stands for semantic equivalence and 0 for others. Models are evaluated by F1 score. The dataset we use is BigCloneBench and filtered following the paper Detecting Code Clones with Graph Neural Network and Flow-Augmented Abstract Syntax Tree.
Supported Tasks and Leaderboards
semantic-similarity-classification: The dataset can be used to train a model for classifying if two given java methods are cloens of each other.
Languages
- Java programming language
Dataset Structure
Data Instances
An example of 'test' looks as follows.
{
"func1": " @Test(expected = GadgetException.class)\n public void malformedGadgetSpecIsCachedAndThrows() throws Exception {\n HttpRequest request = createCacheableRequest();\n expect(pipeline.execute(request)).andReturn(new HttpResponse(\"malformed junk\")).once();\n replay(pipeline);\n try {\n specFactory.getGadgetSpec(createContext(SPEC_URL, false));\n fail(\"No exception thrown on bad parse\");\n } catch (GadgetException e) {\n }\n specFactory.getGadgetSpec(createContext(SPEC_URL, false));\n }\n",
"func2": " public InputStream getInputStream() throws TGBrowserException {\n try {\n if (!this.isFolder()) {\n URL url = new URL(this.url);\n InputStream stream = url.openStream();\n return stream;\n }\n } catch (Throwable throwable) {\n throw new TGBrowserException(throwable);\n }\n return null;\n }\n",
"id": 0,
"id1": 2381663,
"id2": 4458076,
"label": false
}
Data Fields
In the following each data field in go is explained for each config. The data fields are the same among all splits.
default
| field name | type | description |
|---|---|---|
| id | int32 | Index of the sample |
| id1 | int32 | The first function id |
| id2 | int32 | The second function id |
| func1 | string | The full text of the first function |
| func2 | string | The full text of the second function |
| label | bool | 1 is the functions are not equivalent, 0 otherwise |
Data Splits
| name | train | validation | test |
|---|---|---|---|
| default | 901028 | 415416 | 415416 |
Dataset Creation
Curation Rationale
[More Information Needed]
Source Data
Initial Data Collection and Normalization
Data was mined from the IJaDataset 2.0 dataset. [More Information Needed]
Who are the source language producers?
[More Information Needed]
Annotations
Annotation process
Data was manually labeled by three judges by automatically identifying potential clones using search heuristics. [More Information Needed]
Who are the annotators?
[More Information Needed]
Personal and Sensitive Information
[More Information Needed]
Considerations for Using the Data
Social Impact of Dataset
[More Information Needed]
Discussion of Biases
Most of the clones are type 1 and 2 with type 3 and especially type 4 being rare.
[More Information Needed]
Other Known Limitations
[More Information Needed]
Additional Information
Dataset Curators
https://github.com/microsoft, https://github.com/madlag
Licensing Information
Computational Use of Data Agreement (C-UDA) License.
Citation Information
@inproceedings{svajlenko2014towards,
title={Towards a big data curated benchmark of inter-project code clones},
author={Svajlenko, Jeffrey and Islam, Judith F and Keivanloo, Iman and Roy, Chanchal K and Mia, Mohammad Mamun},
booktitle={2014 IEEE International Conference on Software Maintenance and Evolution},
pages={476--480},
year={2014},
organization={IEEE}
}
@inproceedings{wang2020detecting,
title={Detecting Code Clones with Graph Neural Network and Flow-Augmented Abstract Syntax Tree},
author={Wang, Wenhan and Li, Ge and Ma, Bo and Xia, Xin and Jin, Zhi},
booktitle={2020 IEEE 27th International Conference on Software Analysis, Evolution and Reengineering (SANER)},
pages={261--271},
year={2020},
organization={IEEE}
}
Contributions
Thanks to @madlag (and partly also @ncoop57) for adding this dataset.
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