15 contributors

History: 197 commits

hchen725

Add checks for custom attributes and n_counts prior to sum ensembl id

da2aaea verified 18 days ago

docs
move dict loading to function in eval utils 4 months ago
examples
further emphasize different token dictionaries in examples 18 days ago
fine_tuned_models
update with 12L and 20L i4096 gc95M models, multitask and quantiz code 4 months ago
geneformer
Add checks for custom attributes and n_counts prior to sum ensembl id 18 days ago
gf-12L-30M-i2048
update with 12L and 20L i4096 gc95M models, multitask and quantiz code 4 months ago
gf-12L-95M-i4096
update with 12L and 20L i4096 gc95M models, multitask and quantiz code 4 months ago
gf-12L-95M-i4096_CLcancer
update with 12L and 20L i4096 gc95M models, multitask and quantiz code 4 months ago
gf-20L-95M-i4096
update with 12L and 20L i4096 gc95M models, multitask and quantiz code 4 months ago
gf-6L-30M-i2048
update with 12L and 20L i4096 gc95M models, multitask and quantiz code 4 months ago
.gitattributes

1.27 kB

precommit formatting 4 months ago
.gitignore

3.08 kB

Add gitignore file over 1 year ago
.pre-commit-config.yaml

737 Bytes

Add pre-commit config about 1 year ago
.readthedocs.yaml

396 Bytes

update readthedocs.yaml 11 months ago
MANIFEST.in

195 Bytes

update setup with req and manifest with updated filenames 4 months ago
README.md

8.46 kB

Adding tags to the model (#448) about 1 month ago
config.json

591 Bytes

update with 12L and 20L i4096 gc95M models, multitask and quantiz code 4 months ago
generation_config.json

90 Bytes

update with 12L and 20L i4096 gc95M models, multitask and quantiz code 4 months ago
model.safetensors

152 MB
LFS

update with 12L and 20L i4096 gc95M models, multitask and quantiz code 4 months ago
requirements.txt

362 Bytes

update transformers version to match pretrainer using accelerate about 1 month ago
setup.py

1.06 kB

Add find_packages to automatically include mtl and subpackages in setup.py (#410) 4 months ago
training_args.bin
Detected Pickle imports (8)
- "transformers.trainer_utils.IntervalStrategy",
- "transformers.trainer_utils.SchedulerType",
- "transformers.training_args.OptimizerNames",
- "accelerate.utils.dataclasses.DistributedType",
- "torch.device",
- "transformers.trainer_utils.HubStrategy",
- "transformers.training_args.TrainingArguments",
- "accelerate.state.PartialState"
How to fix it?
4.92 kB
LFS

update with 12L and 20L i4096 gc95M models, multitask and quantiz code 4 months ago

Detected Pickle imports (8)