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ctheodoris
/
Geneformer
like
200
Fill-Mask
Transformers
Safetensors
ctheodoris/Genecorpus-30M
bert
Inference Endpoints
License:
apache-2.0
Model card
Files
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446
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42acd14
Geneformer
14 contributors
History:
69 commits
giovp
update tokenizer to use total counts
42acd14
over 1 year ago
examples
Add instructions to convert gene annotations w/ Ensembl Biomart
over 1 year ago
geneformer-12L-30M
Upload 12 layer Geneformer model
over 1 year ago
geneformer
update tokenizer to use total counts
over 1 year ago
.gitattributes
Safe
1.24 kB
Add gene name : Ensembl ID dictionary
over 1 year ago
.gitignore
Safe
3.08 kB
Add gitignore file
over 1 year ago
MANIFEST.in
Safe
127 Bytes
Fixes to stats and adding gene dict attempt number 2 (#13)
over 1 year ago
README.md
Safe
5.15 kB
Update manuscript link to SharedIt
over 1 year ago
config.json
Safe
565 Bytes
upload Geneformer 6L-30M config
over 2 years ago
pytorch_model.bin
Safe
pickle
Detected Pickle imports (4)
"torch._utils._rebuild_tensor_v2"
,
"torch.FloatStorage"
,
"torch.LongStorage"
,
"collections.OrderedDict"
What is a pickle import?
41.2 MB
LFS
upload Geneformer 6L-30M
over 2 years ago
setup.py
Safe
637 Bytes
Add setup.py
about 2 years ago
training_args.bin
pickle
Detected Pickle imports (4)
"transformers.trainer_utils.IntervalStrategy"
,
"transformers.trainer_utils.SchedulerType"
,
"transformers.training_args.TrainingArguments"
,
"torch.device"
How to fix it?
2.61 kB
LFS
upload training args for Geneformer 6L-30M
over 2 years ago