Geneformer / geneformer /__init__.py
Christina Theodoris
Add function to extract and plot cell embeddings
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from . import tokenizer
from . import pretrainer
from . import collator_for_classification
from . import in_silico_perturber
from . import in_silico_perturber_stats
from .tokenizer import TranscriptomeTokenizer
from .pretrainer import GeneformerPretrainer
from .collator_for_classification import DataCollatorForGeneClassification
from .collator_for_classification import DataCollatorForCellClassification
from .emb_extractor import EmbExtractor
from .in_silico_perturber import InSilicoPerturber
from .in_silico_perturber_stats import InSilicoPerturberStats