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--- |
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library_name: transformers |
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tags: [clinical nlp] |
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--- |
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# Model Card for Model ID |
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<!-- Provide a quick summary of what the model is/does. --> |
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## Model Details |
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### Model Description |
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<!-- Provide a longer summary of what this model is. --> |
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This is the model card of a 🤗 transformers model that has been pushed on the Hub. This model card has been automatically generated. |
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- **Developed by:** [More Information Needed] |
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- **Funded by [optional]:** [More Information Needed] |
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- **Shared by [optional]:** [More Information Needed] |
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- **Model type:** [More Information Needed] |
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- **Language(s) (NLP):** [More Information Needed] |
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- **License:** [More Information Needed] |
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- **Finetuned from model [optional]:** [More Information Needed] |
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### Model Sources [optional] |
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<!-- Provide the basic links for the model. --> |
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- **Repository:** [More Information Needed] |
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- **Paper [optional]:** [More Information Needed] |
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- **Demo [optional]:** [More Information Needed] |
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## Uses |
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<!-- Address questions around how the model is intended to be used, including the foreseeable users of the model and those affected by the model. --> |
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### Direct Use |
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<!-- This section is for the model use without fine-tuning or plugging into a larger ecosystem/app. --> |
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[More Information Needed] |
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### Downstream Use [optional] |
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<!-- This section is for the model use when fine-tuned for a task, or when plugged into a larger ecosystem/app --> |
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[More Information Needed] |
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### Out-of-Scope Use |
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<!-- This section addresses misuse, malicious use, and uses that the model will not work well for. --> |
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[More Information Needed] |
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## Bias, Risks, and Limitations |
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<!-- This section is meant to convey both technical and sociotechnical limitations. --> |
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[More Information Needed] |
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### Recommendations |
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<!-- This section is meant to convey recommendations with respect to the bias, risk, and technical limitations. --> |
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Users (both direct and downstream) should be made aware of the risks, biases and limitations of the model. More information needed for further recommendations. |
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## How to Get Started with the Model |
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Use the code below to get started with the model. |
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[More Information Needed] |
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## Training Details |
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### Training Data |
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<!-- This should link to a Dataset Card, perhaps with a short stub of information on what the training data is all about as well as documentation related to data pre-processing or additional filtering. --> |
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[More Information Needed] |
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### Training Procedure |
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<!-- This relates heavily to the Technical Specifications. Content here should link to that section when it is relevant to the training procedure. --> |
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#### Preprocessing [optional] |
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[More Information Needed] |
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#### Training Hyperparameters |
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- **Training regime:** [More Information Needed] <!--fp32, fp16 mixed precision, bf16 mixed precision, bf16 non-mixed precision, fp16 non-mixed precision, fp8 mixed precision --> |
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#### Speeds, Sizes, Times [optional] |
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<!-- This section provides information about throughput, start/end time, checkpoint size if relevant, etc. --> |
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[More Information Needed] |
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## Evaluation |
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<!-- This section describes the evaluation protocols and provides the results. --> |
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### Testing Data, Factors & Metrics |
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#### Testing Data |
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<!-- This should link to a Dataset Card if possible. --> |
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[More Information Needed] |
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#### Factors |
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<!-- These are the things the evaluation is disaggregating by, e.g., subpopulations or domains. --> |
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[More Information Needed] |
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#### Metrics |
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<!-- These are the evaluation metrics being used, ideally with a description of why. --> |
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[More Information Needed] |
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### Results |
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#### Sensitive Health Information Recognition |
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| Coding Type | Precision | Recall | F-measure | Support | |
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|-------------|----------:|:------:|----------:|--------:| |
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| PATIENT | 0.8187919 | 0.1703911 | 0.2820809 | 716 | |
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| IDNUM | 0.9224937 | 0.5165094 | 0.6622316 | 2120 | |
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| DATE | 0.9332247 | 0.9320862 | 0.9326552 | 2459 | |
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| MEDICALRECORD | 0.7428058 | 0.5528782 | 0.6339217 | 747 | |
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| CITY | 0.9758308 | 0.8659517 | 0.9176136 | 373 | |
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| STATE | 0.9937888 | 0.9638554 | 0.9785933 | 332 | |
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| ZIP | 0.9871795 | 0.6543909 | 0.7870528 | 353 | |
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| DEPARTMENT | 0.8079096 | 0.6825776 | 0.7399741 | 419 | |
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| HOSPITAL | 0.9493243 | 0.7036728 | 0.8082454 | 1198 | |
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| DOCTOR | 0.8871097 | 0.3330328 | 0.4842657 | 3327 | |
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| TIME | 0.7804878 | 0.4085106 | 0.5363128 | 470 | |
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| STREET | 0.7372881 | 0.252907 | 0.3766234 | 344 | |
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| DURATION | 1 | 0.25 | 0.4 | 12 | |
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| SET | 0.6666667 | 0.4 | 0.5 | 5 | |
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| AGE | 0.9512195 | 0.7647059 | 0.8478261 | 51 | |
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| ORGANIZATION | 0.15625 | 0.06756756 | 0.09433962 | 74 | |
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| LOCATION-OTHER | 0 | 0 | 0 | 6 | |
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| PHONE | 0 | 0 | 0 | 1 | |
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| **Micro-avg. F** | 0.9010895 | 0.565926 | 0.695221 | 13007 | |
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| **Macro-avg. F** | 0.7394651 | 0.4732798 | 0.5771599 | 13007 | |
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#### Temporal Information Normalization |
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| Temporal Type | Precision | Recall | F-measure | Support | |
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|-------------|----------:|:------:|----------:|----------:| |
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| DATE | 0.7988656 | 0.7446116 | 0.7707851 | 2459 | |
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| TIME | 0.6875 | 0.2808511 | 0.3987916 | 470 | |
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| DURATION | 0.6666667 | 0.1666667 | 0.2666667 | 12 | |
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| SET | 1 | 0.4 | 0.5714286 | 5 | |
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| **Micro-avg.** | 0.7902772 | 0.667685 | 0.7238271 | 2946 | |
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| **Macro-avg.** | 0.7882581 | 0.3980323 | 0.5289636 | 2946 | |
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#### Summary |
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## Model Examination [optional] |
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<!-- Relevant interpretability work for the model goes here --> |
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[More Information Needed] |
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## Environmental Impact |
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<!-- Total emissions (in grams of CO2eq) and additional considerations, such as electricity usage, go here. Edit the suggested text below accordingly --> |
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Carbon emissions can be estimated using the [Machine Learning Impact calculator](https://mlco2.github.io/impact#compute) presented in [Lacoste et al. (2019)](https://arxiv.org/abs/1910.09700). |
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- **Hardware Type:** [More Information Needed] |
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- **Hours used:** [More Information Needed] |
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- **Cloud Provider:** [More Information Needed] |
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- **Compute Region:** [More Information Needed] |
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- **Carbon Emitted:** [More Information Needed] |
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## Technical Specifications [optional] |
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### Model Architecture and Objective |
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[More Information Needed] |
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### Compute Infrastructure |
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[More Information Needed] |
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#### Hardware |
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[More Information Needed] |
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#### Software |
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[More Information Needed] |
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## Citation [optional] |
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<!-- If there is a paper or blog post introducing the model, the APA and Bibtex information for that should go in this section. --> |
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**BibTeX:** |
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[More Information Needed] |
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**APA:** |
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[More Information Needed] |
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## Glossary [optional] |
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<!-- If relevant, include terms and calculations in this section that can help readers understand the model or model card. --> |
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[More Information Needed] |
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## More Information [optional] |
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[More Information Needed] |
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## Model Card Authors [optional] |
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[More Information Needed] |
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## Model Card Contact |
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[More Information Needed] |
